RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ZNF772Q68DY9 489 aaPredicted RBP25.06■■□□□ 1.6
PDLIM7-213ENST00000505074 CHD2O14647 1828 aaKnown RBP25.06■■□□□ 1.6
PDLIM7-213ENST00000505074 LMTK2Q8IWU2 1503 aa25.05■■□□□ 1.6
PDLIM7-213ENST00000505074 SPATA31A6Q5VVP1 1343 aa25.05■■□□□ 1.6
PDLIM7-213ENST00000505074 FGD6Q6ZV73 1430 aa25.03■■□□□ 1.6
PDLIM7-213ENST00000505074 LRP6O75581 1613 aa25.02■■□□□ 1.6
PDLIM7-213ENST00000505074 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
PDLIM7-213ENST00000505074 ABCC5O15440 1437 aa25.02■■□□□ 1.6
PDLIM7-213ENST00000505074 SLC52A1Q9NWF4 448 aa25■■□□□ 1.59
PDLIM7-213ENST00000505074 NOS1P29475 1434 aa25■■□□□ 1.59
PDLIM7-213ENST00000505074 SHPRHQ149N8 1683 aa24.98■■□□□ 1.59
PDLIM7-213ENST00000505074 PTPN23Q9H3S7 1636 aa24.98■■□□□ 1.59
PDLIM7-213ENST00000505074 MYO5BQ9ULV0 1848 aa24.98■■□□□ 1.59
PDLIM7-213ENST00000505074 NCOA3Q9Y6Q9 1424 aa24.96■■□□□ 1.59
PDLIM7-213ENST00000505074 PLEKHG1Q9ULL1 1385 aa24.95■■□□□ 1.59
PDLIM7-213ENST00000505074 RXRBP28702 533 aa24.95■■□□□ 1.58
PDLIM7-213ENST00000505074 HDGFP51858 240 aaKnown RBP24.95■■□□□ 1.58
PDLIM7-213ENST00000505074 C14orf37Q86TY3 774 aa24.95■■□□□ 1.58
PDLIM7-213ENST00000505074 DAPK1P53355 1430 aa24.95■■□□□ 1.58
PDLIM7-213ENST00000505074 AHDC1Q5TGY3 1603 aaPredicted RBP24.94■■□□□ 1.58
PDLIM7-213ENST00000505074 PPP1R15AO75807 674 aaPredicted RBP24.94■■□□□ 1.58
PDLIM7-213ENST00000505074 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
PDLIM7-213ENST00000505074 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.92■■□□□ 1.58
PDLIM7-213ENST00000505074 GCC2Q8IWJ2 1684 aa24.92■■□□□ 1.58
PDLIM7-213ENST00000505074 CADPS2Q86UW7 1296 aa24.92■■□□□ 1.58
PDLIM7-213ENST00000505074 ZFYVE9O95405 1425 aa24.92■■□□□ 1.58
PDLIM7-213ENST00000505074 TBX22Q9Y458 520 aa24.9■■□□□ 1.58
PDLIM7-213ENST00000505074 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.58
PDLIM7-213ENST00000505074 RIMS2Q9UQ26 1411 aa24.89■■□□□ 1.58
PDLIM7-213ENST00000505074 ATF3P18847 181 aa24.89■■□□□ 1.58
PDLIM7-213ENST00000505074 C19orf44Q9H6X5 657 aa24.88■■□□□ 1.57
PDLIM7-213ENST00000505074 CHIC2Q9UKJ5 165 aa24.88■■□□□ 1.57
PDLIM7-213ENST00000505074 RPRD2Q5VT52 1461 aaKnown RBP24.88■■□□□ 1.57
PDLIM7-213ENST00000505074 TMEM131LA2VDJ0 1609 aa24.86■■□□□ 1.57
PDLIM7-213ENST00000505074 NUTM2BA6NNL0 878 aaPredicted RBP24.84■■□□□ 1.57
PDLIM7-213ENST00000505074 NUTM2EB1AL46 878 aaPredicted RBP24.84■■□□□ 1.57
PDLIM7-213ENST00000505074 NUTM2AQ8IVF1 878 aaPredicted RBP24.84■■□□□ 1.57
PDLIM7-213ENST00000505074 DIP2AQ14689 1571 aa24.84■■□□□ 1.57
PDLIM7-213ENST00000505074 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.83■■□□□ 1.57
PDLIM7-213ENST00000505074 AFF2P51816 1311 aa24.81■■□□□ 1.56
PDLIM7-213ENST00000505074 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
PDLIM7-213ENST00000505074 BRINP3Q76B58 766 aa24.79■■□□□ 1.56
PDLIM7-213ENST00000505074 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
PDLIM7-213ENST00000505074 CHGAP10645 457 aaKnown RBP24.78■■□□□ 1.56
PDLIM7-213ENST00000505074 FAM50AQ14320 339 aaKnown RBP24.77■■□□□ 1.56
PDLIM7-213ENST00000505074 TRPM2O94759 1503 aa24.75■■□□□ 1.55
PDLIM7-213ENST00000505074 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
PDLIM7-213ENST00000505074 ADGRL2O95490 1459 aa24.74■■□□□ 1.55
PDLIM7-213ENST00000505074 ASXL1Q8IXJ9 1541 aa24.73■■□□□ 1.55
PDLIM7-213ENST00000505074 SETD5Q9C0A6 1442 aa24.73■■□□□ 1.55
PDLIM7-213ENST00000505074 NHSL1Q5SYE7 1610 aa24.72■■□□□ 1.55
PDLIM7-213ENST00000505074 RGS12O14924 1447 aa24.72■■□□□ 1.55
PDLIM7-213ENST00000505074 DCCP43146 1447 aa24.72■■□□□ 1.55
PDLIM7-213ENST00000505074 RBM6P78332 1123 aaKnown RBP24.72■■□□□ 1.55
PDLIM7-213ENST00000505074 AMOTL2Q9Y2J4 779 aa24.72■■□□□ 1.55
PDLIM7-213ENST00000505074 ANKRD50Q9ULJ7 1429 aa24.71■■□□□ 1.55
PDLIM7-213ENST00000505074 LRRC59Q96AG4 307 aaKnown RBP24.71■■□□□ 1.55
PDLIM7-213ENST00000505074 QTRT2Q9H974 415 aaKnown RBP24.71■■□□□ 1.55
PDLIM7-213ENST00000505074 C8orf37Q96NL8 207 aa24.69■■□□□ 1.54
PDLIM7-213ENST00000505074 PTPRUQ92729 1446 aa24.67■■□□□ 1.54
PDLIM7-213ENST00000505074 E9PCH4 1651 aa24.66■■□□□ 1.54
PDLIM7-213ENST00000505074 UNC13BO14795 1591 aa24.66■■□□□ 1.54
PDLIM7-213ENST00000505074 MST1RQ04912 1400 aa24.65■■□□□ 1.54
PDLIM7-213ENST00000505074 XRN1Q8IZH2 1706 aaKnown RBP24.64■■□□□ 1.53
PDLIM7-213ENST00000505074 FOXD1Q16676 465 aa24.63■■□□□ 1.53
PDLIM7-213ENST00000505074 NGLY1Q96IV0 654 aa24.63■■□□□ 1.53
PDLIM7-213ENST00000505074 PNPLA6Q8IY17 1366 aa24.62■■□□□ 1.53
PDLIM7-213ENST00000505074 ATAD2Q6PL18 1390 aa24.61■■□□□ 1.53
PDLIM7-213ENST00000505074 NRXN3Q9Y4C0 1643 aa24.57■■□□□ 1.52
PDLIM7-213ENST00000505074 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
PDLIM7-213ENST00000505074 ADAMTS2O95450 1211 aa24.56■■□□□ 1.52
PDLIM7-213ENST00000505074 ZRANB1Q9UGI0 708 aa24.56■■□□□ 1.52
PDLIM7-213ENST00000505074 SETBP1Q9Y6X0 1596 aa24.55■■□□□ 1.52
PDLIM7-213ENST00000505074 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
PDLIM7-213ENST00000505074 ADGRL3Q9HAR2 1447 aa24.52■■□□□ 1.52
PDLIM7-213ENST00000505074 NALCNQ8IZF0 1738 aa24.52■■□□□ 1.52
PDLIM7-213ENST00000505074 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
PDLIM7-213ENST00000505074 USP21Q9UK80 565 aa24.52■■□□□ 1.52
PDLIM7-213ENST00000505074 TRPC5Q9UL62 973 aaPredicted RBP24.51■■□□□ 1.51
PDLIM7-213ENST00000505074 ITGAEP38570 1179 aa24.5■■□□□ 1.51
PDLIM7-213ENST00000505074 SRCAPQ6ZRS2 3230 aa24.49■■□□□ 1.51
PDLIM7-213ENST00000505074 METP08581 1390 aa24.49■■□□□ 1.51
PDLIM7-213ENST00000505074 LAMC1P11047 1609 aa24.48■■□□□ 1.51
PDLIM7-213ENST00000505074 C1orf167Q5SNV9 1468 aa24.46■■□□□ 1.51
PDLIM7-213ENST00000505074 ZNF326Q5BKZ1 582 aaKnown RBP24.46■■□□□ 1.51
PDLIM7-213ENST00000505074 PTCH1Q13635 1447 aa24.45■■□□□ 1.51
PDLIM7-213ENST00000505074 CCDC125Q86Z20 511 aa24.45■■□□□ 1.5
PDLIM7-213ENST00000505074 SPHKAPQ2M3C7 1700 aa24.44■■□□□ 1.5
PDLIM7-213ENST00000505074 FNBP4Q8N3X1 1017 aaPredicted RBP24.44■■□□□ 1.5
PDLIM7-213ENST00000505074 NUP155O75694 1391 aa24.43■■□□□ 1.5
PDLIM7-213ENST00000505074 ATRNO75882 1429 aa24.43■■□□□ 1.5
PDLIM7-213ENST00000505074 ROCK1Q13464 1354 aa24.42■■□□□ 1.5
PDLIM7-213ENST00000505074 SOS2Q07890 1332 aaPredicted RBP24.42■■□□□ 1.5
PDLIM7-213ENST00000505074 COL22A1Q8NFW1 1626 aaPredicted RBP24.39■■□□□ 1.5
PDLIM7-213ENST00000505074 ORAI2Q96SN7 254 aa24.38■■□□□ 1.49
PDLIM7-213ENST00000505074 MARF1Q9Y4F3 1742 aaKnown RBP24.38■■□□□ 1.49
PDLIM7-213ENST00000505074 NEXMIFQ5QGS0 1516 aa24.35■■□□□ 1.49
PDLIM7-213ENST00000505074 EP400Q96L91 3159 aa24.32■■□□□ 1.48
PDLIM7-213ENST00000505074 KIF1BO60333 1816 aa24.32■■□□□ 1.48
PDLIM7-213ENST00000505074 BCL9LQ86UU0 1499 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms