RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 RGS20O76081 388 aa12.54□□□□□ -0.4
DEPDC1B-203ENST00000505017 SLC10A3P09131 477 aa12.54□□□□□ -0.4
DEPDC1B-203ENST00000505017 PHOX2BQ99453 314 aa12.54□□□□□ -0.4
DEPDC1B-203ENST00000505017 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
DEPDC1B-203ENST00000505017 IL21Q9HBE4 155 aa12.53□□□□□ -0.4
DEPDC1B-203ENST00000505017 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
DEPDC1B-203ENST00000505017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
DEPDC1B-203ENST00000505017 OATP04181 439 aa12.5□□□□□ -0.41
DEPDC1B-203ENST00000505017 COPS2P61201 443 aa12.5□□□□□ -0.41
DEPDC1B-203ENST00000505017 GPIHBP1Q8IV16 184 aa12.49□□□□□ -0.41
DEPDC1B-203ENST00000505017 BLOC1S3Q6QNY0 202 aa12.46□□□□□ -0.41
DEPDC1B-203ENST00000505017 CFHP08603 1231 aa12.45□□□□□ -0.42
DEPDC1B-203ENST00000505017 PPP1R18Q6NYC8 613 aa12.45□□□□□ -0.42
DEPDC1B-203ENST00000505017 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
DEPDC1B-203ENST00000505017 ZPR1O75312 459 aa12.43□□□□□ -0.42
DEPDC1B-203ENST00000505017 PCDHB3Q9Y5E6 796 aa12.43□□□□□ -0.42
DEPDC1B-203ENST00000505017 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
DEPDC1B-203ENST00000505017 SLC4A3P48751 1232 aa12.42□□□□□ -0.42
DEPDC1B-203ENST00000505017 TLL1O43897 1013 aa12.39□□□□□ -0.43
DEPDC1B-203ENST00000505017 DAXXQ9UER7 740 aaPredicted RBP12.39□□□□□ -0.43
DEPDC1B-203ENST00000505017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
DEPDC1B-203ENST00000505017 PRR14Q9BWN1 585 aa12.38□□□□□ -0.43
DEPDC1B-203ENST00000505017 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
DEPDC1B-203ENST00000505017 KMT5BQ4FZB7 885 aa12.35□□□□□ -0.43
DEPDC1B-203ENST00000505017 MAP2K5Q13163 448 aa12.34□□□□□ -0.43
DEPDC1B-203ENST00000505017 EMID1Q96A84 441 aaPredicted RBP12.34□□□□□ -0.43
DEPDC1B-203ENST00000505017 IRX2Q9BZI1 471 aaPredicted RBP12.34□□□□□ -0.43
DEPDC1B-203ENST00000505017 IRF6O14896 467 aa12.33□□□□□ -0.44
DEPDC1B-203ENST00000505017 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
DEPDC1B-203ENST00000505017 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
DEPDC1B-203ENST00000505017 PRKD2Q9BZL6 878 aa12.32□□□□□ -0.44
DEPDC1B-203ENST00000505017 SCUBE3Q8IX30 993 aa12.3□□□□□ -0.44
DEPDC1B-203ENST00000505017 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
DEPDC1B-203ENST00000505017 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
DEPDC1B-203ENST00000505017 GCGRP47871 477 aa12.28□□□□□ -0.44
DEPDC1B-203ENST00000505017 FUT2Q10981 343 aa12.28□□□□□ -0.44
DEPDC1B-203ENST00000505017 CCDC102AQ96A19 550 aa12.27□□□□□ -0.45
DEPDC1B-203ENST00000505017 TMUB1Q9BVT8 246 aa12.27□□□□□ -0.45
DEPDC1B-203ENST00000505017 MINK1Q8N4C8 1332 aaPredicted RBP12.27□□□□□ -0.45
DEPDC1B-203ENST00000505017 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
DEPDC1B-203ENST00000505017 S1PR4O95977 384 aa12.26□□□□□ -0.45
DEPDC1B-203ENST00000505017 MORN1Q5T089 497 aa12.26□□□□□ -0.45
DEPDC1B-203ENST00000505017 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
DEPDC1B-203ENST00000505017 TULP1O00294 542 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1B-203ENST00000505017 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1B-203ENST00000505017 NR1I2O75469 434 aa12.24□□□□□ -0.45
DEPDC1B-203ENST00000505017 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
DEPDC1B-203ENST00000505017 THAP11Q96EK4 314 aa12.24□□□□□ -0.45
DEPDC1B-203ENST00000505017 LCE2BO14633 110 aa12.23□□□□□ -0.45
DEPDC1B-203ENST00000505017 ADH1BP00325 375 aa12.23□□□□□ -0.45
DEPDC1B-203ENST00000505017 MDM2Q00987 491 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1B-203ENST00000505017 CD46P15529 392 aa12.22□□□□□ -0.45
DEPDC1B-203ENST00000505017 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
DEPDC1B-203ENST00000505017 SLC27A5Q9Y2P5 690 aa12.22□□□□□ -0.45
DEPDC1B-203ENST00000505017 GGCXP38435 758 aa12.2□□□□□ -0.46
DEPDC1B-203ENST00000505017 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
DEPDC1B-203ENST00000505017 PLA2G2CQ5R387 149 aa12.2□□□□□ -0.46
DEPDC1B-203ENST00000505017 REPIN1Q9BWE0 567 aaKnown RBP12.2□□□□□ -0.46
DEPDC1B-203ENST00000505017 ZMYND10O75800 440 aa12.18□□□□□ -0.46
DEPDC1B-203ENST00000505017 LIAT1Q6ZQX7 453 aa12.18□□□□□ -0.46
DEPDC1B-203ENST00000505017 FAM160A2Q8N612 972 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1B-203ENST00000505017 ANKLE1Q8NAG6 615 aa12.18□□□□□ -0.46
DEPDC1B-203ENST00000505017 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
DEPDC1B-203ENST00000505017 SPSB2Q99619 263 aa12.18□□□□□ -0.46
DEPDC1B-203ENST00000505017 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
DEPDC1B-203ENST00000505017 TRIM67Q6ZTA4 783 aa12.17□□□□□ -0.46
DEPDC1B-203ENST00000505017 SLC6A16Q9GZN6 736 aa12.17□□□□□ -0.46
DEPDC1B-203ENST00000505017 GFRA3O60609 400 aa12.16□□□□□ -0.46
DEPDC1B-203ENST00000505017 HLA-CQ95604 372 aa12.15□□□□□ -0.46
DEPDC1B-203ENST00000505017 SLC19A1P41440 591 aa12.14□□□□□ -0.47
DEPDC1B-203ENST00000505017 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
DEPDC1B-203ENST00000505017 RNF19BQ6ZMZ0 732 aa12.14□□□□□ -0.47
DEPDC1B-203ENST00000505017 FAM217BQ9NTX9 383 aaPredicted RBP12.14□□□□□ -0.47
DEPDC1B-203ENST00000505017 PRDM9Q9NQV7 894 aa12.13□□□□□ -0.47
DEPDC1B-203ENST00000505017 GPCPD1Q9NPB8 672 aa12.12□□□□□ -0.47
DEPDC1B-203ENST00000505017 SPRYD7Q5W111 196 aa12.11□□□□□ -0.47
DEPDC1B-203ENST00000505017 Q6ZNB5 142 aa12.11□□□□□ -0.47
DEPDC1B-203ENST00000505017 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
DEPDC1B-203ENST00000505017 KDM4AO75164 1064 aa12.1□□□□□ -0.47
DEPDC1B-203ENST00000505017 NRG2O14511 850 aaPredicted RBP12.08□□□□□ -0.48
DEPDC1B-203ENST00000505017 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
DEPDC1B-203ENST00000505017 CLCN1P35523 988 aa12.08□□□□□ -0.48
DEPDC1B-203ENST00000505017 LAPTM4AQ15012 233 aa12.08□□□□□ -0.48
DEPDC1B-203ENST00000505017 PDZRN3Q9UPQ7 1066 aa12.08□□□□□ -0.48
DEPDC1B-203ENST00000505017 HOXA2O43364 376 aa12.06□□□□□ -0.48
DEPDC1B-203ENST00000505017 GUCA2AQ02747 115 aa12.06□□□□□ -0.48
DEPDC1B-203ENST00000505017 ZNF598Q86UK7 904 aaKnown RBP12.06□□□□□ -0.48
DEPDC1B-203ENST00000505017 KRI1Q8N9T8 703 aaKnown RBP12.06□□□□□ -0.48
DEPDC1B-203ENST00000505017 AMHR2Q16671 573 aa12.04□□□□□ -0.48
DEPDC1B-203ENST00000505017 FCF1Q9Y324 198 aaKnown RBP12.04□□□□□ -0.48
DEPDC1B-203ENST00000505017 MSS51Q4VC12 460 aa12.03□□□□□ -0.48
DEPDC1B-203ENST00000505017 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.49
DEPDC1B-203ENST00000505017 ZNF697Q5TEC3 545 aa12.02□□□□□ -0.49
DEPDC1B-203ENST00000505017 GDF9O60383 454 aa12.01□□□□□ -0.49
DEPDC1B-203ENST00000505017 SSTR3P32745 418 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1B-203ENST00000505017 USP46P62068 366 aa12.01□□□□□ -0.49
DEPDC1B-203ENST00000505017 SYMPKQ92797 1274 aaKnown RBP12□□□□□ -0.49
DEPDC1B-203ENST00000505017 MMP16P51512 607 aa11.99□□□□□ -0.49
DEPDC1B-203ENST00000505017 TRAF7Q6Q0C0 670 aa11.99□□□□□ -0.49
DEPDC1B-203ENST00000505017 PKD2L1Q9P0L9 805 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms