RNA–Protein interactions for RNA: ENST00000504547.1

COPG1-203, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-203ENST00000504547 NOS1P29475 1434 aa11.3□□□□□ -0.6
COPG1-203ENST00000504547 NUTM2DQ5VT03 806 aaPredicted RBP11.3□□□□□ -0.6
COPG1-203ENST00000504547 PROSER2Q86WR7 435 aaPredicted RBP11.3□□□□□ -0.6
COPG1-203ENST00000504547 TMEM94Q12767 1356 aa11.29□□□□□ -0.6
COPG1-203ENST00000504547 UNC13BO14795 1591 aa11.29□□□□□ -0.6
COPG1-203ENST00000504547 RPRD2Q5VT52 1461 aaKnown RBP11.29□□□□□ -0.6
COPG1-203ENST00000504547 E9PCH4 1651 aa11.29□□□□□ -0.6
COPG1-203ENST00000504547 SLC52A1Q9NWF4 448 aa11.28□□□□□ -0.6
COPG1-203ENST00000504547 RIMS2Q9UQ26 1411 aa11.27□□□□□ -0.6
COPG1-203ENST00000504547 ROBO1Q9Y6N7 1651 aa11.27□□□□□ -0.6
COPG1-203ENST00000504547 KCNA6P17658 529 aa11.27□□□□□ -0.61
COPG1-203ENST00000504547 C14orf37Q86TY3 774 aa11.27□□□□□ -0.61
COPG1-203ENST00000504547 TMEM131LA2VDJ0 1609 aa11.27□□□□□ -0.61
COPG1-203ENST00000504547 KCNA4P22459 653 aa11.26□□□□□ -0.61
COPG1-203ENST00000504547 IQGAP3Q86VI3 1631 aa11.26□□□□□ -0.61
COPG1-203ENST00000504547 NWD1Q149M9 1564 aa11.25□□□□□ -0.61
COPG1-203ENST00000504547 NUP155O75694 1391 aa11.25□□□□□ -0.61
COPG1-203ENST00000504547 MSH6P52701 1360 aa11.25□□□□□ -0.61
COPG1-203ENST00000504547 NKTRP30414 1462 aaKnown RBP11.25□□□□□ -0.61
COPG1-203ENST00000504547 HDGFP51858 240 aaKnown RBP11.24□□□□□ -0.61
COPG1-203ENST00000504547 ZFYVE9O95405 1425 aa11.24□□□□□ -0.61
COPG1-203ENST00000504547 ROCK1Q13464 1354 aa11.23□□□□□ -0.61
COPG1-203ENST00000504547 PLEKHG1Q9ULL1 1385 aa11.23□□□□□ -0.61
COPG1-203ENST00000504547 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
COPG1-203ENST00000504547 CHD2O14647 1828 aaKnown RBP11.23□□□□□ -0.61
COPG1-203ENST00000504547 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
COPG1-203ENST00000504547 SPHKAPQ2M3C7 1700 aa11.21□□□□□ -0.61
COPG1-203ENST00000504547 ZNF326Q5BKZ1 582 aaKnown RBP11.21□□□□□ -0.61
COPG1-203ENST00000504547 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.21□□□□□ -0.61
COPG1-203ENST00000504547 FAM135BQ49AJ0 1406 aa11.2□□□□□ -0.62
COPG1-203ENST00000504547 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
COPG1-203ENST00000504547 SLAIN2Q9P270 581 aa11.18□□□□□ -0.62
COPG1-203ENST00000504547 DIP2AQ14689 1571 aa11.18□□□□□ -0.62
COPG1-203ENST00000504547 TRPM2O94759 1503 aa11.18□□□□□ -0.62
COPG1-203ENST00000504547 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.17□□□□□ -0.62
COPG1-203ENST00000504547 ADAMTS13Q76LX8 1427 aa11.17□□□□□ -0.62
COPG1-203ENST00000504547 ATF3P18847 181 aa11.16□□□□□ -0.62
COPG1-203ENST00000504547 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
COPG1-203ENST00000504547 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
COPG1-203ENST00000504547 TRIM52Q96A61 297 aa11.15□□□□□ -0.62
COPG1-203ENST00000504547 RGS17Q9UGC6 210 aaPredicted RBP11.15□□□□□ -0.62
COPG1-203ENST00000504547 AMOTL2Q9Y2J4 779 aa11.15□□□□□ -0.62
COPG1-203ENST00000504547 CLTCL1P53675 1640 aa11.15□□□□□ -0.62
COPG1-203ENST00000504547 KIF1BO60333 1816 aa11.14□□□□□ -0.63
COPG1-203ENST00000504547 SETD1AO15047 1707 aaKnown RBP11.14□□□□□ -0.63
COPG1-203ENST00000504547 NRXN3Q9Y4C0 1643 aa11.13□□□□□ -0.63
COPG1-203ENST00000504547 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
COPG1-203ENST00000504547 JCADQ9P266 1359 aa11.13□□□□□ -0.63
COPG1-203ENST00000504547 COL16A1Q07092 1604 aaPredicted RBP11.13□□□□□ -0.63
COPG1-203ENST00000504547 PTPRUQ92729 1446 aa11.12□□□□□ -0.63
COPG1-203ENST00000504547 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
COPG1-203ENST00000504547 C19orf44Q9H6X5 657 aa11.12□□□□□ -0.63
COPG1-203ENST00000504547 NUTM2BA6NNL0 878 aaPredicted RBP11.11□□□□□ -0.63
COPG1-203ENST00000504547 NUTM2EB1AL46 878 aaPredicted RBP11.11□□□□□ -0.63
COPG1-203ENST00000504547 NUTM2AQ8IVF1 878 aaPredicted RBP11.11□□□□□ -0.63
COPG1-203ENST00000504547 XRN1Q8IZH2 1706 aaKnown RBP11.11□□□□□ -0.63
COPG1-203ENST00000504547 PIK3R4Q99570 1358 aa11.11□□□□□ -0.63
COPG1-203ENST00000504547 SETBP1Q9Y6X0 1596 aa11.11□□□□□ -0.63
COPG1-203ENST00000504547 RRBP1Q9P2E9 1410 aaKnown RBP11.1□□□□□ -0.63
COPG1-203ENST00000504547 NAIPQ13075 1403 aa11.09□□□□□ -0.63
COPG1-203ENST00000504547 NCOA3Q9Y6Q9 1424 aa11.09□□□□□ -0.63
COPG1-203ENST00000504547 NEXMIFQ5QGS0 1516 aa11.09□□□□□ -0.63
COPG1-203ENST00000504547 METP08581 1390 aa11.09□□□□□ -0.63
COPG1-203ENST00000504547 LRP6O75581 1613 aa11.09□□□□□ -0.63
COPG1-203ENST00000504547 BRINP3Q76B58 766 aa11.08□□□□□ -0.64
COPG1-203ENST00000504547 NALCNQ8IZF0 1738 aa11.08□□□□□ -0.64
COPG1-203ENST00000504547 AHDC1Q5TGY3 1603 aaPredicted RBP11.08□□□□□ -0.64
COPG1-203ENST00000504547 SHPRHQ149N8 1683 aa11.08□□□□□ -0.64
COPG1-203ENST00000504547 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
COPG1-203ENST00000504547 ASXL1Q8IXJ9 1541 aa11.07□□□□□ -0.64
COPG1-203ENST00000504547 FOXD1Q16676 465 aa11.06□□□□□ -0.64
COPG1-203ENST00000504547 DDX17Q92841 729 aaKnown RBP11.06□□□□□ -0.64
COPG1-203ENST00000504547 SPATA31A6Q5VVP1 1343 aa11.06□□□□□ -0.64
COPG1-203ENST00000504547 HFM1A2PYH4 1435 aa11.05□□□□□ -0.64
COPG1-203ENST00000504547 DCCP43146 1447 aa11.05□□□□□ -0.64
COPG1-203ENST00000504547 MST1RQ04912 1400 aa11.05□□□□□ -0.64
COPG1-203ENST00000504547 ADGRL3Q9HAR2 1447 aa11.04□□□□□ -0.64
COPG1-203ENST00000504547 NHSL1Q5SYE7 1610 aa11.04□□□□□ -0.64
COPG1-203ENST00000504547 PPLO60437 1756 aa11.03□□□□□ -0.64
COPG1-203ENST00000504547 VGFO15240 615 aaPredicted RBP11.02□□□□□ -0.65
COPG1-203ENST00000504547 RGL3Q3MIN7 710 aa11.02□□□□□ -0.65
COPG1-203ENST00000504547 ZNF772Q68DY9 489 aaPredicted RBP11.02□□□□□ -0.65
COPG1-203ENST00000504547 C8orf37Q96NL8 207 aa11.02□□□□□ -0.65
COPG1-203ENST00000504547 AFF2P51816 1311 aa11□□□□□ -0.65
COPG1-203ENST00000504547 ROBO2Q9HCK4 1378 aa11□□□□□ -0.65
COPG1-203ENST00000504547 CCDC144AA2RUR9 1427 aa11□□□□□ -0.65
COPG1-203ENST00000504547 ADAMTS2O95450 1211 aa10.99□□□□□ -0.65
COPG1-203ENST00000504547 LRRC59Q96AG4 307 aaKnown RBP10.99□□□□□ -0.65
COPG1-203ENST00000504547 STK26Q9P289 416 aa10.99□□□□□ -0.65
COPG1-203ENST00000504547 PTCH1Q13635 1447 aa10.99□□□□□ -0.65
COPG1-203ENST00000504547 C1orf167Q5SNV9 1468 aa10.99□□□□□ -0.65
COPG1-203ENST00000504547 NUTM2FA1L443 756 aa10.98□□□□□ -0.65
COPG1-203ENST00000504547 RXRBP28702 533 aa10.98□□□□□ -0.65
COPG1-203ENST00000504547 SETD5Q9C0A6 1442 aa10.98□□□□□ -0.65
COPG1-203ENST00000504547 ORAI2Q96SN7 254 aa10.97□□□□□ -0.65
COPG1-203ENST00000504547 RPGRIP1LQ68CZ1 1315 aa10.97□□□□□ -0.65
COPG1-203ENST00000504547 PNPLA6Q8IY17 1366 aa10.97□□□□□ -0.65
COPG1-203ENST00000504547 ADGRF5Q8IZF2 1346 aa10.96□□□□□ -0.65
COPG1-203ENST00000504547 XPCQ01831 940 aaPredicted RBP10.96□□□□□ -0.65
COPG1-203ENST00000504547 ESCO1Q5FWF5 840 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms