RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 NUDT18Q6ZVK8 323 aa10.39□□□□□ -0.75
COL4A5-207ENST00000504541 TTC13Q8NBP0 860 aa10.39□□□□□ -0.75
COL4A5-207ENST00000504541 TATDN2Q93075 761 aa10.39□□□□□ -0.75
COL4A5-207ENST00000504541 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
COL4A5-207ENST00000504541 RABGEF1Q9UJ41 708 aa10.39□□□□□ -0.75
COL4A5-207ENST00000504541 ADGRG1Q9Y653 693 aa10.38□□□□□ -0.75
COL4A5-207ENST00000504541 SMAPO00193 183 aa10.37□□□□□ -0.75
COL4A5-207ENST00000504541 WIZO95785 1651 aa10.37□□□□□ -0.75
COL4A5-207ENST00000504541 NBPF3Q9H094 633 aa10.36□□□□□ -0.75
COL4A5-207ENST00000504541 TOP2AP11388 1531 aaKnown RBP10.36□□□□□ -0.75
COL4A5-207ENST00000504541 TRIM66O15016 1216 aa10.35□□□□□ -0.75
COL4A5-207ENST00000504541 HDGFP51858 240 aaKnown RBP10.35□□□□□ -0.75
COL4A5-207ENST00000504541 HMGXB3Q12766 1538 aa10.34□□□□□ -0.75
COL4A5-207ENST00000504541 GOLGA8CPA6NN73 597 aa10.34□□□□□ -0.75
COL4A5-207ENST00000504541 MRPL50Q8N5N7 158 aaKnown RBP10.34□□□□□ -0.75
COL4A5-207ENST00000504541 BAZ1BQ9UIG0 1483 aaKnown RBP10.34□□□□□ -0.75
COL4A5-207ENST00000504541 THSD4Q6ZMP0 1018 aa10.33□□□□□ -0.76
COL4A5-207ENST00000504541 METTL3Q86U44 580 aaKnown RBP10.33□□□□□ -0.76
COL4A5-207ENST00000504541 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
COL4A5-207ENST00000504541 SEPT9Q9UHD8 586 aaPredicted RBP10.33□□□□□ -0.76
COL4A5-207ENST00000504541 EYA1Q99502 592 aa10.32□□□□□ -0.76
COL4A5-207ENST00000504541 RCCD1A6NED2 376 aa10.3□□□□□ -0.76
COL4A5-207ENST00000504541 C3orf80F5H4A9 247 aa10.3□□□□□ -0.76
COL4A5-207ENST00000504541 LCE2BO14633 110 aa10.3□□□□□ -0.76
COL4A5-207ENST00000504541 PDE4DQ08499 809 aa10.3□□□□□ -0.76
COL4A5-207ENST00000504541 TTLL12Q14166 644 aaPredicted RBP10.3□□□□□ -0.76
COL4A5-207ENST00000504541 CC2D2AQ9P2K1 1620 aa10.29□□□□□ -0.76
COL4A5-207ENST00000504541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
COL4A5-207ENST00000504541 DNAJB2P25686 324 aa10.29□□□□□ -0.76
COL4A5-207ENST00000504541 MDM2Q00987 491 aaPredicted RBP10.29□□□□□ -0.76
COL4A5-207ENST00000504541 NEUROD2Q15784 382 aa10.29□□□□□ -0.76
COL4A5-207ENST00000504541 FAM98CQ17RN3 349 aaKnown RBP10.29□□□□□ -0.76
COL4A5-207ENST00000504541 LAPTM4BQ86VI4 370 aa10.29□□□□□ -0.76
COL4A5-207ENST00000504541 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-207ENST00000504541 NLRP7Q8WX94 980 aa10.28□□□□□ -0.76
COL4A5-207ENST00000504541 PHOX2BQ99453 314 aa10.28□□□□□ -0.76
COL4A5-207ENST00000504541 CLCN1P35523 988 aa10.27□□□□□ -0.77
COL4A5-207ENST00000504541 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
COL4A5-207ENST00000504541 CCDC88BA6NC98 1476 aa10.27□□□□□ -0.77
COL4A5-207ENST00000504541 AMHR2Q16671 573 aa10.25□□□□□ -0.77
COL4A5-207ENST00000504541 ZFRQ96KR1 1074 aaKnown RBP10.25□□□□□ -0.77
COL4A5-207ENST00000504541 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
COL4A5-207ENST00000504541 DAXXQ9UER7 740 aaPredicted RBP10.24□□□□□ -0.77
COL4A5-207ENST00000504541 SWT1Q5T5J6 900 aaKnown RBP10.23□□□□□ -0.77
COL4A5-207ENST00000504541 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
COL4A5-207ENST00000504541 SAMD7Q7Z3H4 446 aa10.22□□□□□ -0.77
COL4A5-207ENST00000504541 ANKK1Q8NFD2 765 aa10.22□□□□□ -0.77
COL4A5-207ENST00000504541 TMEM134Q9H6X4 195 aa10.22□□□□□ -0.77
COL4A5-207ENST00000504541 RNF40O75150 1001 aa10.21□□□□□ -0.77
COL4A5-207ENST00000504541 BRPF1P55201 1214 aaPredicted RBP10.21□□□□□ -0.77
COL4A5-207ENST00000504541 WNT2BQ93097 391 aa10.21□□□□□ -0.77
COL4A5-207ENST00000504541 GPBP1L1Q9HC44 474 aaPredicted RBP10.21□□□□□ -0.77
COL4A5-207ENST00000504541 DDX11L8A8MPP1 907 aa10.2□□□□□ -0.78
COL4A5-207ENST00000504541 SSTR3P32745 418 aaPredicted RBP10.2□□□□□ -0.78
COL4A5-207ENST00000504541 TRAF7Q6Q0C0 670 aa10.2□□□□□ -0.78
COL4A5-207ENST00000504541 GIGYF2Q6Y7W6 1299 aaKnown RBP10.2□□□□□ -0.78
COL4A5-207ENST00000504541 PARP9Q8IXQ6 854 aa10.2□□□□□ -0.78
COL4A5-207ENST00000504541 LRCH3Q96II8 777 aa10.2□□□□□ -0.78
COL4A5-207ENST00000504541 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.2□□□□□ -0.78
COL4A5-207ENST00000504541 ITGBL1O95965 494 aaPredicted RBP10.19□□□□□ -0.78
COL4A5-207ENST00000504541 LAPTM4AQ15012 233 aa10.19□□□□□ -0.78
COL4A5-207ENST00000504541 SULF1Q8IWU6 871 aa10.19□□□□□ -0.78
COL4A5-207ENST00000504541 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
COL4A5-207ENST00000504541 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
COL4A5-207ENST00000504541 RDH13Q8NBN7 331 aa10.18□□□□□ -0.78
COL4A5-207ENST00000504541 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
COL4A5-207ENST00000504541 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
COL4A5-207ENST00000504541 FAM217BQ9NTX9 383 aaPredicted RBP10.16□□□□□ -0.78
COL4A5-207ENST00000504541 CADPSQ9ULU8 1353 aa10.15□□□□□ -0.78
COL4A5-207ENST00000504541 PPP4CP60510 307 aa10.15□□□□□ -0.78
COL4A5-207ENST00000504541 NECTIN2Q92692 538 aa10.14□□□□□ -0.79
COL4A5-207ENST00000504541 CFTRP13569 1480 aa10.14□□□□□ -0.79
COL4A5-207ENST00000504541 SOWAHBA6NEL2 793 aa10.13□□□□□ -0.79
COL4A5-207ENST00000504541 BCAMP50895 628 aa10.13□□□□□ -0.79
COL4A5-207ENST00000504541 IL27Q8NEV9 243 aa10.13□□□□□ -0.79
COL4A5-207ENST00000504541 BEGAINQ9BUH8 593 aa10.12□□□□□ -0.79
COL4A5-207ENST00000504541 HPS5Q9UPZ3 1129 aa10.12□□□□□ -0.79
COL4A5-207ENST00000504541 MS4A1P11836 297 aa10.11□□□□□ -0.79
COL4A5-207ENST00000504541 TSR3Q9UJK0 312 aaKnown RBP10.11□□□□□ -0.79
COL4A5-207ENST00000504541 GFRA3O60609 400 aa10.1□□□□□ -0.79
COL4A5-207ENST00000504541 NUTM1Q86Y26 1132 aa10.1□□□□□ -0.79
COL4A5-207ENST00000504541 DDRGK1Q96HY6 314 aa10.1□□□□□ -0.79
COL4A5-207ENST00000504541 FAM117AQ9C073 453 aa10.1□□□□□ -0.79
COL4A5-207ENST00000504541 ATP1B4Q9UN42 357 aaPredicted RBP10.09□□□□□ -0.79
COL4A5-207ENST00000504541 SLC10A3P09131 477 aa10.08□□□□□ -0.8
COL4A5-207ENST00000504541 CD46P15529 392 aa10.08□□□□□ -0.8
COL4A5-207ENST00000504541 KMT5BQ4FZB7 885 aa10.08□□□□□ -0.8
COL4A5-207ENST00000504541 CFHP08603 1231 aa10.06□□□□□ -0.8
COL4A5-207ENST00000504541 GCGRP47871 477 aa10.06□□□□□ -0.8
COL4A5-207ENST00000504541 WBP1LQ9NX94 342 aa10.06□□□□□ -0.8
COL4A5-207ENST00000504541 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
COL4A5-207ENST00000504541 RSPH6AQ9H0K4 717 aa10.05□□□□□ -0.8
COL4A5-207ENST00000504541 DIXDC1Q155Q3 683 aa10.04□□□□□ -0.8
COL4A5-207ENST00000504541 KDM4AO75164 1064 aa10.03□□□□□ -0.8
COL4A5-207ENST00000504541 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
COL4A5-207ENST00000504541 LAMC3Q9Y6N6 1575 aa10.03□□□□□ -0.8
COL4A5-207ENST00000504541 GRIPAP1Q4V328 841 aa10.02□□□□□ -0.81
COL4A5-207ENST00000504541 ZNF787Q6DD87 383 aa10.02□□□□□ -0.81
COL4A5-207ENST00000504541 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.81
COL4A5-207ENST00000504541 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms