RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 PBX2P40425 430 aa12.8□□□□□ -0.36
CASC9-201ENST00000504531 CDAN1Q8IWY9 1227 aa12.8□□□□□ -0.36
CASC9-201ENST00000504531 FBXW7Q969H0 707 aa12.8□□□□□ -0.36
CASC9-201ENST00000504531 PCF11O94913 1555 aaKnown RBP12.8□□□□□ -0.36
CASC9-201ENST00000504531 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
CASC9-201ENST00000504531 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
CASC9-201ENST00000504531 PCDHGA10Q9Y5H3 936 aa12.79□□□□□ -0.36
CASC9-201ENST00000504531 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
CASC9-201ENST00000504531 TARBP1Q13395 1621 aaKnown RBP12.78□□□□□ -0.36
CASC9-201ENST00000504531 DDX12PQ92771 950 aa12.78□□□□□ -0.36
CASC9-201ENST00000504531 KCNH8Q96L42 1107 aa12.77□□□□□ -0.37
CASC9-201ENST00000504531 GRXCR2A6NFK2 248 aa12.75□□□□□ -0.37
CASC9-201ENST00000504531 PHLDB1Q86UU1 1377 aa12.75□□□□□ -0.37
CASC9-201ENST00000504531 BCL2L12Q9HB09 334 aa12.75□□□□□ -0.37
CASC9-201ENST00000504531 RAB3GAP2Q9H2M9 1393 aa12.74□□□□□ -0.37
CASC9-201ENST00000504531 NBR1Q14596 966 aa12.74□□□□□ -0.37
CASC9-201ENST00000504531 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
CASC9-201ENST00000504531 CCDC18Q5T9S5 1454 aa12.72□□□□□ -0.37
CASC9-201ENST00000504531 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
CASC9-201ENST00000504531 ARHGAP33O14559 1287 aa12.72□□□□□ -0.37
CASC9-201ENST00000504531 SEMA3EO15041 775 aa12.72□□□□□ -0.37
CASC9-201ENST00000504531 PTPREP23469 700 aa12.72□□□□□ -0.37
CASC9-201ENST00000504531 SMYD5Q6GMV2 418 aa12.71□□□□□ -0.37
CASC9-201ENST00000504531 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.37
CASC9-201ENST00000504531 MAGI1Q96QZ7 1491 aaPredicted RBP12.7□□□□□ -0.38
CASC9-201ENST00000504531 MAPKBP1O60336 1514 aa12.69□□□□□ -0.38
CASC9-201ENST00000504531 EHBP1L1Q8N3D4 1523 aa12.69□□□□□ -0.38
CASC9-201ENST00000504531 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
CASC9-201ENST00000504531 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
CASC9-201ENST00000504531 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
CASC9-201ENST00000504531 SYNJ2O15056 1496 aa12.69□□□□□ -0.38
CASC9-201ENST00000504531 FGD6Q6ZV73 1430 aa12.69□□□□□ -0.38
CASC9-201ENST00000504531 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
CASC9-201ENST00000504531 OSBPP22059 807 aa12.67□□□□□ -0.38
CASC9-201ENST00000504531 NEUROD1Q13562 356 aa12.67□□□□□ -0.38
CASC9-201ENST00000504531 KCNK17Q96T54 332 aa12.67□□□□□ -0.38
CASC9-201ENST00000504531 KRTAP3-3Q9BYR6 98 aa12.67□□□□□ -0.38
CASC9-201ENST00000504531 KRTAP3-2Q9BYR7 98 aa12.67□□□□□ -0.38
CASC9-201ENST00000504531 MAP3K7O43318 606 aa12.66□□□□□ -0.38
CASC9-201ENST00000504531 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
CASC9-201ENST00000504531 PBRM1Q86U86 1689 aa12.66□□□□□ -0.38
CASC9-201ENST00000504531 UGGT2Q9NYU1 1516 aa12.66□□□□□ -0.38
CASC9-201ENST00000504531 SUPT6HQ7KZ85 1726 aaKnown RBP12.65□□□□□ -0.38
CASC9-201ENST00000504531 HFM1A2PYH4 1435 aa12.65□□□□□ -0.38
CASC9-201ENST00000504531 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
CASC9-201ENST00000504531 AKNAQ7Z591 1439 aa12.65□□□□□ -0.38
CASC9-201ENST00000504531 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
CASC9-201ENST00000504531 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
CASC9-201ENST00000504531 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
CASC9-201ENST00000504531 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
CASC9-201ENST00000504531 LSM11P83369 360 aaKnown RBP eCLIP12.64□□□□□ -0.39
CASC9-201ENST00000504531 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
CASC9-201ENST00000504531 MTUS2Q5JR59 1369 aa12.64□□□□□ -0.39
CASC9-201ENST00000504531 IQGAP2Q13576 1575 aa12.64□□□□□ -0.39
CASC9-201ENST00000504531 HECW1Q76N89 1606 aa12.63□□□□□ -0.39
CASC9-201ENST00000504531 PSEN2P49810 448 aa12.63□□□□□ -0.39
CASC9-201ENST00000504531 TCOF1Q13428 1488 aaKnown RBP12.63□□□□□ -0.39
CASC9-201ENST00000504531 MIA2Q96PC5 1412 aa12.62□□□□□ -0.39
CASC9-201ENST00000504531 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
CASC9-201ENST00000504531 NCOA2Q15596 1464 aa12.61□□□□□ -0.39
CASC9-201ENST00000504531 FAM69CQ0P6D2 419 aa12.61□□□□□ -0.39
CASC9-201ENST00000504531 UACAQ9BZF9 1416 aa12.61□□□□□ -0.39
CASC9-201ENST00000504531 CERKQ8TCT0 537 aa12.6□□□□□ -0.39
CASC9-201ENST00000504531 KIAA0586Q9BVV6 1533 aa12.6□□□□□ -0.39
CASC9-201ENST00000504531 TK2O00142 265 aa12.59□□□□□ -0.39
CASC9-201ENST00000504531 FAM50AQ14320 339 aaKnown RBP12.59□□□□□ -0.39
CASC9-201ENST00000504531 SLC4A5Q9BY07 1137 aa12.59□□□□□ -0.39
CASC9-201ENST00000504531 LRRIQ1Q96JM4 1722 aa12.59□□□□□ -0.39
CASC9-201ENST00000504531 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
CASC9-201ENST00000504531 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
CASC9-201ENST00000504531 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
CASC9-201ENST00000504531 TSR1Q2NL82 804 aaKnown RBP12.57□□□□□ -0.4
CASC9-201ENST00000504531 EPRSP07814 1512 aaKnown RBP12.56□□□□□ -0.4
CASC9-201ENST00000504531 PTPN23Q9H3S7 1636 aa12.55□□□□□ -0.4
CASC9-201ENST00000504531 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
CASC9-201ENST00000504531 ZBED2Q9BTP6 218 aa12.55□□□□□ -0.4
CASC9-201ENST00000504531 NAIPQ13075 1403 aa12.54□□□□□ -0.4
CASC9-201ENST00000504531 COL9A1P20849 921 aa12.54□□□□□ -0.4
CASC9-201ENST00000504531 ADGRD1Q6QNK2 874 aa12.54□□□□□ -0.4
CASC9-201ENST00000504531 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
CASC9-201ENST00000504531 ITGAEP38570 1179 aa12.53□□□□□ -0.4
CASC9-201ENST00000504531 ATP1B4Q9UN42 357 aaPredicted RBP12.53□□□□□ -0.4
CASC9-201ENST00000504531 ERCC6L2Q5T890 1561 aa12.52□□□□□ -0.4
CASC9-201ENST00000504531 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
CASC9-201ENST00000504531 BCANQ96GW7 911 aa12.52□□□□□ -0.41
CASC9-201ENST00000504531 CDHR5Q9HBB8 845 aa12.52□□□□□ -0.41
CASC9-201ENST00000504531 GRIN2AQ12879 1464 aa12.52□□□□□ -0.41
CASC9-201ENST00000504531 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
CASC9-201ENST00000504531 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
CASC9-201ENST00000504531 VPS9D1Q9Y2B5 631 aa12.51□□□□□ -0.41
CASC9-201ENST00000504531 ROCK1Q13464 1354 aa12.51□□□□□ -0.41
CASC9-201ENST00000504531 RBM26Q5T8P6 1007 aaKnown RBP12.5□□□□□ -0.41
CASC9-201ENST00000504531 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
CASC9-201ENST00000504531 PTPRKQ15262 1439 aa12.5□□□□□ -0.41
CASC9-201ENST00000504531 KIAA0556O60303 1618 aa12.49□□□□□ -0.41
CASC9-201ENST00000504531 MAGI3Q5TCQ9 1506 aa12.49□□□□□ -0.41
CASC9-201ENST00000504531 PRG4Q92954 1404 aaPredicted RBP12.49□□□□□ -0.41
CASC9-201ENST00000504531 CDK11AQ9UQ88 783 aaPredicted RBP12.48□□□□□ -0.41
CASC9-201ENST00000504531 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
CASC9-201ENST00000504531 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms