RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
UBE2B-204ENST00000504431 KDM4CQ9H3R0 1056 aa13.24□□□□□ -0.29
UBE2B-204ENST00000504431 VPS9D1Q9Y2B5 631 aa13.24□□□□□ -0.29
UBE2B-204ENST00000504431 DNAJB2P25686 324 aa13.23□□□□□ -0.29
UBE2B-204ENST00000504431 LSM11P83369 360 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBE2B-204ENST00000504431 GPBP1L1Q9HC44 474 aaPredicted RBP13.22□□□□□ -0.29
UBE2B-204ENST00000504431 MDM2Q00987 491 aaPredicted RBP13.21□□□□□ -0.29
UBE2B-204ENST00000504431 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
UBE2B-204ENST00000504431 RCCD1A6NED2 376 aa13.2□□□□□ -0.3
UBE2B-204ENST00000504431 GIGYF2Q6Y7W6 1299 aaKnown RBP13.2□□□□□ -0.3
UBE2B-204ENST00000504431 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
UBE2B-204ENST00000504431 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
UBE2B-204ENST00000504431 LAPTM4BQ86VI4 370 aa13.19□□□□□ -0.3
UBE2B-204ENST00000504431 ADGRD1Q6QNK2 874 aa13.18□□□□□ -0.3
UBE2B-204ENST00000504431 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
UBE2B-204ENST00000504431 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
UBE2B-204ENST00000504431 DDRGK1Q96HY6 314 aa13.17□□□□□ -0.3
UBE2B-204ENST00000504431 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
UBE2B-204ENST00000504431 SMAPO00193 183 aa13.16□□□□□ -0.3
UBE2B-204ENST00000504431 SLC4A3P48751 1232 aa13.16□□□□□ -0.3
UBE2B-204ENST00000504431 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
UBE2B-204ENST00000504431 CADPSQ9ULU8 1353 aa13.16□□□□□ -0.3
UBE2B-204ENST00000504431 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
UBE2B-204ENST00000504431 SULF1Q8IWU6 871 aa13.15□□□□□ -0.3
UBE2B-204ENST00000504431 TMEM134Q9H6X4 195 aa13.15□□□□□ -0.3
UBE2B-204ENST00000504431 C3orf80F5H4A9 247 aa13.14□□□□□ -0.31
UBE2B-204ENST00000504431 MRPL50Q8N5N7 158 aaKnown RBP13.14□□□□□ -0.31
UBE2B-204ENST00000504431 SEPT9Q9UHD8 586 aaPredicted RBP13.14□□□□□ -0.31
UBE2B-204ENST00000504431 LAMC3Q9Y6N6 1575 aa13.13□□□□□ -0.31
UBE2B-204ENST00000504431 BHMG1C9JSJ3 638 aaPredicted RBP13.12□□□□□ -0.31
UBE2B-204ENST00000504431 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
UBE2B-204ENST00000504431 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
UBE2B-204ENST00000504431 NLRP7Q8WX94 980 aa13.12□□□□□ -0.31
UBE2B-204ENST00000504431 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
UBE2B-204ENST00000504431 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
UBE2B-204ENST00000504431 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
UBE2B-204ENST00000504431 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
UBE2B-204ENST00000504431 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
UBE2B-204ENST00000504431 POTEMA6NI47 508 aa13.1□□□□□ -0.31
UBE2B-204ENST00000504431 HRO43593 1189 aa13.08□□□□□ -0.32
UBE2B-204ENST00000504431 GOLGA8CPA6NN73 597 aa13.07□□□□□ -0.32
UBE2B-204ENST00000504431 MS4A1P11836 297 aa13.07□□□□□ -0.32
UBE2B-204ENST00000504431 SLF2Q8IX21 1173 aa13.07□□□□□ -0.32
UBE2B-204ENST00000504431 FAM117AQ9C073 453 aa13.07□□□□□ -0.32
UBE2B-204ENST00000504431 CFTRP13569 1480 aa13.07□□□□□ -0.32
UBE2B-204ENST00000504431 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
UBE2B-204ENST00000504431 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
UBE2B-204ENST00000504431 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
UBE2B-204ENST00000504431 DDX11L8A8MPP1 907 aa13.05□□□□□ -0.32
UBE2B-204ENST00000504431 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
UBE2B-204ENST00000504431 ZFRQ96KR1 1074 aaKnown RBP13.05□□□□□ -0.32
UBE2B-204ENST00000504431 KRTAP3-3Q9BYR6 98 aa13.05□□□□□ -0.32
UBE2B-204ENST00000504431 KRTAP3-2Q9BYR7 98 aa13.05□□□□□ -0.32
UBE2B-204ENST00000504431 DIXDC1Q155Q3 683 aa13.04□□□□□ -0.32
UBE2B-204ENST00000504431 CDAN1Q8IWY9 1227 aa13.04□□□□□ -0.32
UBE2B-204ENST00000504431 BEGAINQ9BUH8 593 aa13.03□□□□□ -0.32
UBE2B-204ENST00000504431 RDH13Q8NBN7 331 aa13.02□□□□□ -0.33
UBE2B-204ENST00000504431 ANKK1Q8NFD2 765 aa13.02□□□□□ -0.33
UBE2B-204ENST00000504431 LRCH3Q96II8 777 aa13.02□□□□□ -0.33
UBE2B-204ENST00000504431 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
UBE2B-204ENST00000504431 FANCD2Q9BXW9 1451 aa13.02□□□□□ -0.33
UBE2B-204ENST00000504431 CD46P15529 392 aa13.01□□□□□ -0.33
UBE2B-204ENST00000504431 SAMD7Q7Z3H4 446 aa13.01□□□□□ -0.33
UBE2B-204ENST00000504431 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
UBE2B-204ENST00000504431 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.99□□□□□ -0.33
UBE2B-204ENST00000504431 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
UBE2B-204ENST00000504431 RNF40O75150 1001 aa12.98□□□□□ -0.33
UBE2B-204ENST00000504431 GOPCQ9HD26 462 aa12.98□□□□□ -0.33
UBE2B-204ENST00000504431 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
UBE2B-204ENST00000504431 PRDM2Q13029 1718 aa12.97□□□□□ -0.33
UBE2B-204ENST00000504431 NUTM1Q86Y26 1132 aa12.96□□□□□ -0.33
UBE2B-204ENST00000504431 PCDH10Q9P2E7 1040 aa12.96□□□□□ -0.33
UBE2B-204ENST00000504431 WNT2BQ93097 391 aa12.95□□□□□ -0.34
UBE2B-204ENST00000504431 MRC2Q9UBG0 1479 aa12.94□□□□□ -0.34
UBE2B-204ENST00000504431 SH3D19Q5HYK7 790 aa12.94□□□□□ -0.34
UBE2B-204ENST00000504431 SOWAHBA6NEL2 793 aa12.93□□□□□ -0.34
UBE2B-204ENST00000504431 PRR14Q9BWN1 585 aa12.93□□□□□ -0.34
UBE2B-204ENST00000504431 GCGRP47871 477 aa12.92□□□□□ -0.34
UBE2B-204ENST00000504431 USP46P62068 366 aa12.92□□□□□ -0.34
UBE2B-204ENST00000504431 KMT5BQ4FZB7 885 aa12.92□□□□□ -0.34
UBE2B-204ENST00000504431 PCMTD1Q96MG8 357 aaPredicted RBP12.91□□□□□ -0.34
UBE2B-204ENST00000504431 TBC1D2Q9BYX2 928 aa12.91□□□□□ -0.34
UBE2B-204ENST00000504431 URB2Q14146 1524 aaKnown RBP12.91□□□□□ -0.34
UBE2B-204ENST00000504431 SLC10A3P09131 477 aa12.9□□□□□ -0.34
UBE2B-204ENST00000504431 CUX2O14529 1486 aa12.9□□□□□ -0.34
UBE2B-204ENST00000504431 KDM4AO75164 1064 aa12.89□□□□□ -0.35
UBE2B-204ENST00000504431 CFHP08603 1231 aa12.89□□□□□ -0.35
UBE2B-204ENST00000504431 SKIV2LQ15477 1246 aaKnown RBP12.89□□□□□ -0.35
UBE2B-204ENST00000504431 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
UBE2B-204ENST00000504431 TSR3Q9UJK0 312 aaKnown RBP12.89□□□□□ -0.35
UBE2B-204ENST00000504431 WDR62O43379 1518 aa12.88□□□□□ -0.35
UBE2B-204ENST00000504431 PPP4CP60510 307 aa12.88□□□□□ -0.35
UBE2B-204ENST00000504431 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
UBE2B-204ENST00000504431 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
UBE2B-204ENST00000504431 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
UBE2B-204ENST00000504431 BCAMP50895 628 aa12.86□□□□□ -0.35
UBE2B-204ENST00000504431 GJA5P36382 358 aa12.85□□□□□ -0.35
UBE2B-204ENST00000504431 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
UBE2B-204ENST00000504431 ATP1B4Q9UN42 357 aaPredicted RBP12.85□□□□□ -0.35
UBE2B-204ENST00000504431 THSD4Q6ZMP0 1018 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms