RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 TROQ12816 1431 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-208ENST00000504220 MLECQ14165 292 aa4.81□□□□□ -1.64
PCDH11X-208ENST00000504220 EHBP1L1Q8N3D4 1523 aa4.81□□□□□ -1.64
PCDH11X-208ENST00000504220 MAGI2Q86UL8 1455 aa4.81□□□□□ -1.64
PCDH11X-208ENST00000504220 CAPN2P17655 700 aa4.81□□□□□ -1.64
PCDH11X-208ENST00000504220 INO80Q9ULG1 1556 aaPredicted RBP4.8□□□□□ -1.64
PCDH11X-208ENST00000504220 SIRT1Q96EB6 747 aa4.8□□□□□ -1.64
PCDH11X-208ENST00000504220 PLCH2O75038 1416 aa4.8□□□□□ -1.64
PCDH11X-208ENST00000504220 TIAM1Q13009 1591 aa4.8□□□□□ -1.64
PCDH11X-208ENST00000504220 INHBEP58166 350 aa4.8□□□□□ -1.64
PCDH11X-208ENST00000504220 MRS2Q9HD23 443 aa4.8□□□□□ -1.64
PCDH11X-208ENST00000504220 SAMD9LQ8IVG5 1584 aa4.8□□□□□ -1.64
PCDH11X-208ENST00000504220 CDK11BP21127 795 aaKnown RBP4.8□□□□□ -1.64
PCDH11X-208ENST00000504220 HECW2Q9P2P5 1572 aa4.8□□□□□ -1.64
PCDH11X-208ENST00000504220 PLEKHD1A6NEE1 506 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 PLXNC1O60486 1568 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 NCLP19338 710 aaKnown RBP4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 CERS3Q8IU89 383 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 CEP162Q5TB80 1403 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 KIDINS220Q9ULH0 1771 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 ABCA6Q8N139 1617 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 MROH2AA6NES4 1674 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 CROCC2H7BZ55 1655 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 SUPT6HQ7KZ85 1726 aaKnown RBP4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 TMC1Q8TDI8 760 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 KDM2AQ9Y2K7 1162 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 ADGBQ8N7X0 1667 aa4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 CFAP65Q6ZU64 1925 aaKnown RBP4.79□□□□□ -1.64
PCDH11X-208ENST00000504220 POGZQ7Z3K3 1410 aa4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 FANCAO15360 1455 aa4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 SGSM3Q96HU1 749 aa4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 LAS1LQ9Y4W2 734 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 DIP2CQ9Y2E4 1556 aa4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 IRX5P78411 483 aaPredicted RBP4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 FAM163AQ96GL9 167 aaPredicted RBP4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 MAST1Q9Y2H9 1570 aa4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 CHGAP10645 457 aaKnown RBP4.78□□□□□ -1.64
PCDH11X-208ENST00000504220 AGLP35573 1532 aa4.78□□□□□ -1.65
PCDH11X-208ENST00000504220 ZFYVE16Q7Z3T8 1539 aa4.78□□□□□ -1.65
PCDH11X-208ENST00000504220 HDAC5Q9UQL6 1122 aa4.77□□□□□ -1.65
PCDH11X-208ENST00000504220 ADGRL1O94910 1474 aa4.77□□□□□ -1.65
PCDH11X-208ENST00000504220 ARHGEF12Q9NZN5 1544 aa4.77□□□□□ -1.65
PCDH11X-208ENST00000504220 AKNAQ7Z591 1439 aa4.77□□□□□ -1.65
PCDH11X-208ENST00000504220 ARHGEF5Q12774 1597 aa4.77□□□□□ -1.65
PCDH11X-208ENST00000504220 FER1L4A9Z1Z3 1794 aa4.77□□□□□ -1.65
PCDH11X-208ENST00000504220 TULP2O00295 520 aa4.77□□□□□ -1.65
PCDH11X-208ENST00000504220 SEMA3FQ13275 785 aa4.77□□□□□ -1.65
PCDH11X-208ENST00000504220 FAM135AQ9P2D6 1515 aa4.76□□□□□ -1.65
PCDH11X-208ENST00000504220 MLH3Q9UHC1 1453 aa4.76□□□□□ -1.65
PCDH11X-208ENST00000504220 DENND4BO75064 1496 aaPredicted RBP4.76□□□□□ -1.65
PCDH11X-208ENST00000504220 MTUS2Q5JR59 1369 aa4.76□□□□□ -1.65
PCDH11X-208ENST00000504220 TONSLQ96HA7 1378 aa4.76□□□□□ -1.65
PCDH11X-208ENST00000504220 FAM163BP0C2L3 166 aa4.76□□□□□ -1.65
PCDH11X-208ENST00000504220 TSGA10IPQ3SY00 556 aa4.76□□□□□ -1.65
PCDH11X-208ENST00000504220 ANP32BQ92688 251 aaKnown RBP4.76□□□□□ -1.65
PCDH11X-208ENST00000504220 ZNF518AQ6AHZ1 1483 aa4.76□□□□□ -1.65
PCDH11X-208ENST00000504220 KANK4Q5T7N3 995 aaPredicted RBP4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 GPATCH8Q9UKJ3 1502 aaKnown RBP4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 MADDQ8WXG6 1647 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 FAM193AP78312 1265 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 MAPK8IP2Q13387 824 aaPredicted RBP4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 PNISRQ8TF01 805 aaKnown RBP4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 ZBTB9Q96C00 473 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 VPS8Q8N3P4 1428 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 KIAA1107Q9UPP5 1409 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 FSD2A1L4K1 749 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 B4GALNT3Q6L9W6 998 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 STK26Q9P289 416 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 MCCP23508 829 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 NECTIN2Q92692 538 aa4.75□□□□□ -1.65
PCDH11X-208ENST00000504220 EIF2AK4Q9P2K8 1649 aaKnown RBP4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 PLEKHH2Q8IVE3 1493 aa4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 CC2D2BQ6DHV5 1058 aa4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 MPNDQ8N594 471 aa4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 ARHGAP5Q13017 1502 aa4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 RNF17Q9BXT8 1623 aaKnown RBP4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 NEFMP07197 916 aa4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 RGL3Q3MIN7 710 aa4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 CT47A1Q5JQC4 288 aaPredicted RBP4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 UPF2Q9HAU5 1272 aaKnown RBP4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 ZNF142P52746 1687 aaPredicted RBP4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 CCDC189A1A4V9 331 aa4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 GEMIN8Q9NWZ8 242 aaKnown RBP4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 RIMS1Q86UR5 1692 aaKnown RBP4.74□□□□□ -1.65
PCDH11X-208ENST00000504220 PREX1Q8TCU6 1659 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 PLCB2Q00722 1185 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 ZC3H13Q5T200 1668 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 SYCP2Q9BX26 1530 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 NFKBIBQ15653 356 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 YY1AP1Q9H869 796 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 CCDC9Q9Y3X0 531 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 LRRC9Q6ZRR7 1453 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 MBD5Q9P267 1494 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 C3P01024 1663 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 C9orf84Q5VXU9 1444 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 DEPDC5O75140 1603 aa4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 IRX3P78415 501 aaPredicted RBP4.73□□□□□ -1.65
PCDH11X-208ENST00000504220 CFDP1Q9UEE9 299 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms