RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
KLHL3-204ENST00000504208 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.3
KLHL3-204ENST00000504208 C11orf95C9JLR9 678 aaPredicted RBP13.2□□□□□ -0.3
KLHL3-204ENST00000504208 ZNF142P52746 1687 aaPredicted RBP13.2□□□□□ -0.3
KLHL3-204ENST00000504208 LAMC1P11047 1609 aa13.2□□□□□ -0.3
KLHL3-204ENST00000504208 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
KLHL3-204ENST00000504208 KDM5AP29375 1690 aaKnown RBP13.19□□□□□ -0.3
KLHL3-204ENST00000504208 ADGRB3O60242 1522 aa13.19□□□□□ -0.3
KLHL3-204ENST00000504208 UBR1Q8IWV7 1749 aa13.18□□□□□ -0.3
KLHL3-204ENST00000504208 TMEM131LA2VDJ0 1609 aa13.18□□□□□ -0.3
KLHL3-204ENST00000504208 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
KLHL3-204ENST00000504208 PPLO60437 1756 aa13.18□□□□□ -0.3
KLHL3-204ENST00000504208 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
KLHL3-204ENST00000504208 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
KLHL3-204ENST00000504208 PTPRMP28827 1452 aa13.17□□□□□ -0.3
KLHL3-204ENST00000504208 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
KLHL3-204ENST00000504208 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
KLHL3-204ENST00000504208 TRPM1Q7Z4N2 1603 aa13.15□□□□□ -0.3
KLHL3-204ENST00000504208 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
KLHL3-204ENST00000504208 KTN1Q86UP2 1357 aaKnown RBP13.14□□□□□ -0.31
KLHL3-204ENST00000504208 TNRQ92752 1358 aa13.14□□□□□ -0.31
KLHL3-204ENST00000504208 CEP170BQ9Y4F5 1589 aaPredicted RBP13.14□□□□□ -0.31
KLHL3-204ENST00000504208 RGL3Q3MIN7 710 aa13.14□□□□□ -0.31
KLHL3-204ENST00000504208 SETD1BQ9UPS6 1966 aaKnown RBP13.13□□□□□ -0.31
KLHL3-204ENST00000504208 NLRP1Q9C000 1473 aa13.13□□□□□ -0.31
KLHL3-204ENST00000504208 ST20-MTHFSA0A0A6YYL1 179 aa13.12□□□□□ -0.31
KLHL3-204ENST00000504208 CEBPAP49715 358 aaPredicted RBP13.12□□□□□ -0.31
KLHL3-204ENST00000504208 PLPPR3Q6T4P5 718 aa13.12□□□□□ -0.31
KLHL3-204ENST00000504208 NEXMIFQ5QGS0 1516 aa13.1□□□□□ -0.31
KLHL3-204ENST00000504208 MYOM2P54296 1465 aa13.09□□□□□ -0.31
KLHL3-204ENST00000504208 SLC52A1Q9NWF4 448 aa13.08□□□□□ -0.32
KLHL3-204ENST00000504208 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
KLHL3-204ENST00000504208 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
KLHL3-204ENST00000504208 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
KLHL3-204ENST00000504208 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
KLHL3-204ENST00000504208 IDI1Q13907 227 aa13.06□□□□□ -0.32
KLHL3-204ENST00000504208 RALBP1Q15311 655 aa13.06□□□□□ -0.32
KLHL3-204ENST00000504208 CDCA8Q53HL2 280 aa13.06□□□□□ -0.32
KLHL3-204ENST00000504208 TESK2Q96S53 571 aa13.06□□□□□ -0.32
KLHL3-204ENST00000504208 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
KLHL3-204ENST00000504208 KIAA1210Q9ULL0 1709 aa13.05□□□□□ -0.32
KLHL3-204ENST00000504208 TMF1P82094 1093 aa13.05□□□□□ -0.32
KLHL3-204ENST00000504208 EIF3AQ14152 1382 aaKnown RBP13.04□□□□□ -0.32
KLHL3-204ENST00000504208 SCAF11Q99590 1463 aaKnown RBP13.04□□□□□ -0.32
KLHL3-204ENST00000504208 NRXN1Q9ULB1 1477 aa13.03□□□□□ -0.32
KLHL3-204ENST00000504208 SLIT1O75093 1534 aa13.03□□□□□ -0.32
KLHL3-204ENST00000504208 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
KLHL3-204ENST00000504208 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
KLHL3-204ENST00000504208 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
KLHL3-204ENST00000504208 ZFYVE9O95405 1425 aa13.02□□□□□ -0.33
KLHL3-204ENST00000504208 NRXN3Q9Y4C0 1643 aa13.01□□□□□ -0.33
KLHL3-204ENST00000504208 ARHGAP23Q9P227 1491 aa13□□□□□ -0.33
KLHL3-204ENST00000504208 RIMS2Q9UQ26 1411 aa13□□□□□ -0.33
KLHL3-204ENST00000504208 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
KLHL3-204ENST00000504208 BRD4O60885 1362 aaPredicted RBP12.99□□□□□ -0.33
KLHL3-204ENST00000504208 PER1O15534 1290 aaPredicted RBP12.98□□□□□ -0.33
KLHL3-204ENST00000504208 PIK3C2GO75747 1445 aa12.98□□□□□ -0.33
KLHL3-204ENST00000504208 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
KLHL3-204ENST00000504208 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
KLHL3-204ENST00000504208 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
KLHL3-204ENST00000504208 POLR3GLQ9BT43 218 aa12.98□□□□□ -0.33
KLHL3-204ENST00000504208 SETBP1Q9Y6X0 1596 aa12.98□□□□□ -0.33
KLHL3-204ENST00000504208 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
KLHL3-204ENST00000504208 SBNO2Q9Y2G9 1366 aa12.97□□□□□ -0.33
KLHL3-204ENST00000504208 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
KLHL3-204ENST00000504208 INSRP06213 1382 aa12.96□□□□□ -0.34
KLHL3-204ENST00000504208 PARD3Q8TEW0 1356 aa12.96□□□□□ -0.34
KLHL3-204ENST00000504208 DISP3Q9P2K9 1392 aa12.96□□□□□ -0.34
KLHL3-204ENST00000504208 VGFO15240 615 aaPredicted RBP12.94□□□□□ -0.34
KLHL3-204ENST00000504208 CCDC184Q52MB2 194 aa12.94□□□□□ -0.34
KLHL3-204ENST00000504208 C14orf93Q9H972 538 aaKnown RBP12.94□□□□□ -0.34
KLHL3-204ENST00000504208 ASXL1Q8IXJ9 1541 aa12.94□□□□□ -0.34
KLHL3-204ENST00000504208 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
KLHL3-204ENST00000504208 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
KLHL3-204ENST00000504208 DIP2AQ14689 1571 aa12.94□□□□□ -0.34
KLHL3-204ENST00000504208 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
KLHL3-204ENST00000504208 NLRP13Q86W25 1043 aa12.94□□□□□ -0.34
KLHL3-204ENST00000504208 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
KLHL3-204ENST00000504208 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
KLHL3-204ENST00000504208 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
KLHL3-204ENST00000504208 TMC1Q8TDI8 760 aa12.93□□□□□ -0.34
KLHL3-204ENST00000504208 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
KLHL3-204ENST00000504208 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
KLHL3-204ENST00000504208 NPC1L1Q9UHC9 1359 aa12.93□□□□□ -0.34
KLHL3-204ENST00000504208 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
KLHL3-204ENST00000504208 NEFLP07196 543 aa12.92□□□□□ -0.34
KLHL3-204ENST00000504208 THEMISQ8N1K5 641 aaPredicted RBP12.92□□□□□ -0.34
KLHL3-204ENST00000504208 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
KLHL3-204ENST00000504208 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
KLHL3-204ENST00000504208 CFAP70Q5T0N1 1121 aa12.91□□□□□ -0.34
KLHL3-204ENST00000504208 ERICH6BQ5W0A0 696 aa12.91□□□□□ -0.34
KLHL3-204ENST00000504208 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
KLHL3-204ENST00000504208 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.9□□□□□ -0.34
KLHL3-204ENST00000504208 PANK3Q9H999 370 aa12.9□□□□□ -0.34
KLHL3-204ENST00000504208 LRPPRCP42704 1394 aaKnown RBP12.9□□□□□ -0.34
KLHL3-204ENST00000504208 PLEKHG1Q9ULL1 1385 aa12.9□□□□□ -0.34
KLHL3-204ENST00000504208 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
KLHL3-204ENST00000504208 QRICH2Q9H0J4 1663 aa12.88□□□□□ -0.35
KLHL3-204ENST00000504208 LTKP29376 864 aa12.88□□□□□ -0.35
KLHL3-204ENST00000504208 EID1Q9Y6B2 187 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms