RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 DIAPH1O60610 1272 aaKnown RBP8.83□□□□□ -1
SYNPO2-205ENST00000504178 AEBP2Q6ZN18 517 aaPredicted RBP8.83□□□□□ -1
SYNPO2-205ENST00000504178 DDX11L8A8MPP1 907 aa8.83□□□□□ -1
SYNPO2-205ENST00000504178 OSCARQ8IYS5 282 aa8.83□□□□□ -1
SYNPO2-205ENST00000504178 ANO8Q9HCE9 1232 aaPredicted RBP8.83□□□□□ -1
SYNPO2-205ENST00000504178 CUX1P39880 1505 aa8.83□□□□□ -1
SYNPO2-205ENST00000504178 ANO2Q9NQ90 1003 aa8.82□□□□□ -1
SYNPO2-205ENST00000504178 PLIN1O60240 522 aa8.82□□□□□ -1
SYNPO2-205ENST00000504178 VPS37DQ86XT2 251 aa8.82□□□□□ -1
SYNPO2-205ENST00000504178 CRBNQ96SW2 442 aa8.82□□□□□ -1
SYNPO2-205ENST00000504178 ROCK1Q13464 1354 aa8.82□□□□□ -1
SYNPO2-205ENST00000504178 IFIT2P09913 472 aaKnown RBP8.81□□□□□ -1
SYNPO2-205ENST00000504178 DDX58O95786 925 aaKnown RBP8.81□□□□□ -1
SYNPO2-205ENST00000504178 MCTP1Q6DN14 999 aa8.81□□□□□ -1
SYNPO2-205ENST00000504178 TRIM29Q14134 588 aa8.81□□□□□ -1
SYNPO2-205ENST00000504178 RUFY2Q8WXA3 655 aa8.81□□□□□ -1
SYNPO2-205ENST00000504178 GAPVD1Q14C86 1478 aa8.81□□□□□ -1
SYNPO2-205ENST00000504178 RRP1P56182 461 aaKnown RBP8.81□□□□□ -1
SYNPO2-205ENST00000504178 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
SYNPO2-205ENST00000504178 DHX57Q6P158 1386 aaKnown RBP8.81□□□□□ -1
SYNPO2-205ENST00000504178 APPP05067 770 aa8.8□□□□□ -1
SYNPO2-205ENST00000504178 RIPK4P57078 832 aa8.8□□□□□ -1
SYNPO2-205ENST00000504178 FAM161AQ3B820 660 aa8.8□□□□□ -1
SYNPO2-205ENST00000504178 FAM69CQ0P6D2 419 aa8.8□□□□□ -1
SYNPO2-205ENST00000504178 FGD5Q6ZNL6 1462 aa8.8□□□□□ -1
SYNPO2-205ENST00000504178 ATF3P18847 181 aa8.8□□□□□ -1
SYNPO2-205ENST00000504178 USP35Q9P2H5 1018 aa8.8□□□□□ -1
SYNPO2-205ENST00000504178 ATP6V1DQ9Y5K8 247 aa8.8□□□□□ -1
SYNPO2-205ENST00000504178 FOXD4L6Q3SYB3 417 aaPredicted RBP8.79□□□□□ -1
SYNPO2-205ENST00000504178 FOXD4L3Q6VB84 417 aaPredicted RBP8.79□□□□□ -1
SYNPO2-205ENST00000504178 COG6Q9Y2V7 657 aa8.79□□□□□ -1
SYNPO2-205ENST00000504178 GOLGA6L19H0YKK7 550 aa8.79□□□□□ -1
SYNPO2-205ENST00000504178 DHX16O60231 1041 aaKnown RBP8.79□□□□□ -1
SYNPO2-205ENST00000504178 RUSC2Q8N2Y8 1516 aa8.79□□□□□ -1
SYNPO2-205ENST00000504178 G3BP1Q13283 466 aaKnown RBP eCLIP8.79□□□□□ -1
SYNPO2-205ENST00000504178 EXOC6Q8TAG9 804 aa8.79□□□□□ -1
SYNPO2-205ENST00000504178 DDX19BQ9UMR2 479 aa8.79□□□□□ -1
SYNPO2-205ENST00000504178 KLHL34Q8N239 644 aa8.78□□□□□ -1
SYNPO2-205ENST00000504178 MYOM3Q5VTT5 1437 aa8.78□□□□□ -1
SYNPO2-205ENST00000504178 MIA2Q96PC5 1412 aa8.78□□□□□ -1
SYNPO2-205ENST00000504178 TPM1P09493 284 aa8.78□□□□□ -1
SYNPO2-205ENST00000504178 CWC22Q9HCG8 908 aaKnown RBP8.78□□□□□ -1
SYNPO2-205ENST00000504178 ARHGAP5Q13017 1502 aa8.78□□□□□ -1
SYNPO2-205ENST00000504178 NFXL1Q6ZNB6 911 aa8.78□□□□□ -1
SYNPO2-205ENST00000504178 API5Q9BZZ5 524 aaKnown RBP8.78□□□□□ -1
SYNPO2-205ENST00000504178 TSPYL4Q9UJ04 414 aa8.78□□□□□ -1
SYNPO2-205ENST00000504178 APAF1O14727 1248 aa8.78□□□□□ -1
SYNPO2-205ENST00000504178 CPLX2Q6PUV4 134 aaKnown RBP8.78□□□□□ -1
SYNPO2-205ENST00000504178 RBM33Q96EV2 1170 aaKnown RBP8.78□□□□□ -1
SYNPO2-205ENST00000504178 PCMTD1Q96MG8 357 aaPredicted RBP8.78□□□□□ -1
SYNPO2-205ENST00000504178 ERICH2A1L162 156 aa8.77□□□□□ -1
SYNPO2-205ENST00000504178 FKBP5Q13451 457 aaPredicted RBP8.77□□□□□ -1
SYNPO2-205ENST00000504178 CCDC47Q96A33 483 aaKnown RBP8.77□□□□□ -1
SYNPO2-205ENST00000504178 ZKSCAN1P17029 563 aaPredicted RBP8.77□□□□□ -1.01
SYNPO2-205ENST00000504178 RUNDC1Q96C34 613 aa8.77□□□□□ -1.01
SYNPO2-205ENST00000504178 RAD54L2Q9Y4B4 1467 aa8.77□□□□□ -1.01
SYNPO2-205ENST00000504178 BECN2A8MW95 431 aa8.77□□□□□ -1.01
SYNPO2-205ENST00000504178 DZIP1LQ8IYY4 767 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 REC8O95072 547 aa8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 TRDNQ13061 729 aa8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 SKOR2Q2VWA4 1001 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 RAPGEF4Q8WZA2 1011 aa8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 CPLX1O14810 134 aa8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 PRKRIP1Q9H875 184 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 DDX49Q9Y6V7 483 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 ZBED9Q6R2W3 1325 aa8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 HMOX1P09601 288 aa8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 PDE4AP27815 886 aa8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 RIC3Q7Z5B4 369 aa8.76□□□□□ -1.01
SYNPO2-205ENST00000504178 RNF20Q5VTR2 975 aa8.75□□□□□ -1.01
SYNPO2-205ENST00000504178 NUTM2GQ5VZR2 741 aa8.75□□□□□ -1.01
SYNPO2-205ENST00000504178 WWC1Q8IX03 1113 aa8.75□□□□□ -1.01
SYNPO2-205ENST00000504178 GNAI1P63096 354 aa8.75□□□□□ -1.01
SYNPO2-205ENST00000504178 FYB1O15117 783 aa8.75□□□□□ -1.01
SYNPO2-205ENST00000504178 SLC4A3P48751 1232 aa8.75□□□□□ -1.01
SYNPO2-205ENST00000504178 FOSBP53539 338 aa8.75□□□□□ -1.01
SYNPO2-205ENST00000504178 AIMP1Q12904 312 aaKnown RBP8.75□□□□□ -1.01
SYNPO2-205ENST00000504178 CABP2Q9NPB3 220 aa8.75□□□□□ -1.01
SYNPO2-205ENST00000504178 CCAR2Q8N163 923 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 CCDC70Q6NSX1 233 aa8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 HOOK1Q9UJC3 728 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 NLRP2Q9NX02 1062 aa8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 ERC2O15083 957 aa8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 TNNT3P45378 269 aaPredicted RBP8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 HSP90AB4PQ58FF6 505 aa8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 SAMD1Q6SPF0 538 aaPredicted RBP8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 CCDC43Q96MW1 224 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 PHF23Q9BUL5 403 aaPredicted RBP8.74□□□□□ -1.01
SYNPO2-205ENST00000504178 CCDC27Q2M243 656 aa8.73□□□□□ -1.01
SYNPO2-205ENST00000504178 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-205ENST00000504178 ANKRD20A12PQ8NF67 263 aa8.73□□□□□ -1.01
SYNPO2-205ENST00000504178 FGD6Q6ZV73 1430 aa8.73□□□□□ -1.01
SYNPO2-205ENST00000504178 INTS3Q68E01 1043 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-205ENST00000504178 NEUROD6Q96NK8 337 aa8.73□□□□□ -1.01
SYNPO2-205ENST00000504178 NINLQ9Y2I6 1382 aa8.72□□□□□ -1.01
SYNPO2-205ENST00000504178 BICD2Q8TD16 824 aa8.72□□□□□ -1.01
SYNPO2-205ENST00000504178 FYCO1Q9BQS8 1478 aa8.72□□□□□ -1.01
SYNPO2-205ENST00000504178 SMG6Q86US8 1419 aaKnown RBP8.72□□□□□ -1.01
SYNPO2-205ENST00000504178 RRBP1Q9P2E9 1410 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms