RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 PLEKHH1Q9ULM0 1364 aa22.91■■□□□ 1.26
POLR2J3-209ENST00000504157 ERBINQ96RT1 1412 aa22.91■■□□□ 1.26
POLR2J3-209ENST00000504157 PDCL3Q9H2J4 239 aa22.9■■□□□ 1.26
POLR2J3-209ENST00000504157 EIF2AK4Q9P2K8 1649 aaKnown RBP22.9■■□□□ 1.26
POLR2J3-209ENST00000504157 CC2D1BQ5T0F9 858 aaKnown RBP22.9■■□□□ 1.26
POLR2J3-209ENST00000504157 ABCA8O94911 1581 aa22.9■■□□□ 1.26
POLR2J3-209ENST00000504157 PANK2Q9BZ23 570 aa22.89■■□□□ 1.26
POLR2J3-209ENST00000504157 ARHGEF5Q12774 1597 aa22.88■■□□□ 1.25
POLR2J3-209ENST00000504157 TPM2P07951 284 aa22.88■■□□□ 1.25
POLR2J3-209ENST00000504157 RGS3P49796 1198 aa22.88■■□□□ 1.25
POLR2J3-209ENST00000504157 PANK3Q9H999 370 aa22.88■■□□□ 1.25
POLR2J3-209ENST00000504157 ADAMTS8Q9UP79 889 aa22.88■■□□□ 1.25
POLR2J3-209ENST00000504157 FAM135AQ9P2D6 1515 aa22.88■■□□□ 1.25
POLR2J3-209ENST00000504157 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
POLR2J3-209ENST00000504157 ZNF777Q9ULD5 760 aaPredicted RBP22.88■■□□□ 1.25
POLR2J3-209ENST00000504157 GOLGA2Q08379 1002 aa22.87■■□□□ 1.25
POLR2J3-209ENST00000504157 TRMT2AQ8IZ69 625 aaKnown RBP22.86■■□□□ 1.25
POLR2J3-209ENST00000504157 SLKQ9H2G2 1235 aaPredicted RBP22.86■■□□□ 1.25
POLR2J3-209ENST00000504157 CCDC144AA2RUR9 1427 aa22.86■■□□□ 1.25
POLR2J3-209ENST00000504157 CALD1Q05682 793 aaKnown RBP22.85■■□□□ 1.25
POLR2J3-209ENST00000504157 MRE11P49959 708 aa22.85■■□□□ 1.25
POLR2J3-209ENST00000504157 A2MP01023 1474 aa22.84■■□□□ 1.25
POLR2J3-209ENST00000504157 ESPNB1AK53 854 aa22.84■■□□□ 1.25
POLR2J3-209ENST00000504157 TMF1P82094 1093 aa22.83■■□□□ 1.25
POLR2J3-209ENST00000504157 SLFN5Q08AF3 891 aa22.83■■□□□ 1.25
POLR2J3-209ENST00000504157 CCDC141Q6ZP82 1450 aa22.83■■□□□ 1.24
POLR2J3-209ENST00000504157 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
POLR2J3-209ENST00000504157 NBPF1Q3BBV0 1214 aa22.82■■□□□ 1.24
POLR2J3-209ENST00000504157 MAPK8IP3Q9UPT6 1336 aa22.81■■□□□ 1.24
POLR2J3-209ENST00000504157 ZMYM3Q14202 1370 aa22.81■■□□□ 1.24
POLR2J3-209ENST00000504157 TSPY4P0CV99 314 aa22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 TSPY10P0CW01 314 aa22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 PIK3C2GO75747 1445 aa22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 RNF17Q9BXT8 1623 aaKnown RBP22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 NKTRP30414 1462 aaKnown RBP22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 MCM4P33991 863 aa22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 WDR43Q15061 677 aaKnown RBP eCLIP22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 ARXQ96QS3 562 aa22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 NINLQ9Y2I6 1382 aa22.8■■□□□ 1.24
POLR2J3-209ENST00000504157 WDR7Q9Y4E6 1490 aa22.79■■□□□ 1.24
POLR2J3-209ENST00000504157 PPP2R1AP30153 589 aa22.78■■□□□ 1.24
POLR2J3-209ENST00000504157 ATP10BO94823 1461 aa22.78■■□□□ 1.24
POLR2J3-209ENST00000504157 MYH16Q9H6N6 1097 aa22.78■■□□□ 1.24
POLR2J3-209ENST00000504157 PRDM4Q9UKN5 801 aa22.78■■□□□ 1.24
POLR2J3-209ENST00000504157 ISY1Q9ULR0 285 aaKnown RBP22.78■■□□□ 1.24
POLR2J3-209ENST00000504157 PLA2R1Q13018 1463 aa22.78■■□□□ 1.24
POLR2J3-209ENST00000504157 ERBB4Q15303 1308 aa22.77■■□□□ 1.24
POLR2J3-209ENST00000504157 UHRF1BP1LA0JNW5 1464 aa22.77■■□□□ 1.24
POLR2J3-209ENST00000504157 UNC13BO14795 1591 aa22.77■■□□□ 1.24
POLR2J3-209ENST00000504157 MAGI2Q86UL8 1455 aa22.76■■□□□ 1.23
POLR2J3-209ENST00000504157 SEC24BO95487 1268 aa22.76■■□□□ 1.23
POLR2J3-209ENST00000504157 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
POLR2J3-209ENST00000504157 CGNL1Q0VF96 1302 aa22.75■■□□□ 1.23
POLR2J3-209ENST00000504157 NPC1L1Q9UHC9 1359 aa22.74■■□□□ 1.23
POLR2J3-209ENST00000504157 SYNMO15061 1565 aa22.74■■□□□ 1.23
POLR2J3-209ENST00000504157 PLXNC1O60486 1568 aa22.74■■□□□ 1.23
POLR2J3-209ENST00000504157 NGEFQ8N5V2 710 aa22.73■■□□□ 1.23
POLR2J3-209ENST00000504157 GRPEL1Q9HAV7 217 aa22.73■■□□□ 1.23
POLR2J3-209ENST00000504157 ATP10AO60312 1499 aa22.73■■□□□ 1.23
POLR2J3-209ENST00000504157 MYO5CQ9NQX4 1742 aa22.73■■□□□ 1.23
POLR2J3-209ENST00000504157 PDE3AQ14432 1141 aa22.73■■□□□ 1.23
POLR2J3-209ENST00000504157 GZF1Q9H116 711 aaPredicted RBP22.73■■□□□ 1.23
POLR2J3-209ENST00000504157 TRAK2O60296 914 aa22.72■■□□□ 1.23
POLR2J3-209ENST00000504157 AMER1Q5JTC6 1135 aaPredicted RBP22.72■■□□□ 1.23
POLR2J3-209ENST00000504157 TBC1D2Q9BYX2 928 aa22.71■■□□□ 1.23
POLR2J3-209ENST00000504157 RBM10P98175 930 aaKnown RBP22.7■■□□□ 1.22
POLR2J3-209ENST00000504157 KNSTRNQ9Y448 316 aa22.7■■□□□ 1.22
POLR2J3-209ENST00000504157 ASXL1Q8IXJ9 1541 aa22.69■■□□□ 1.22
POLR2J3-209ENST00000504157 IGHDP01880 384 aa22.69■■□□□ 1.22
POLR2J3-209ENST00000504157 E9PSI1 815 aa22.69■■□□□ 1.22
POLR2J3-209ENST00000504157 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
POLR2J3-209ENST00000504157 AAMPQ13685 434 aa22.68■■□□□ 1.22
POLR2J3-209ENST00000504157 ZCCHC11Q5TAX3 1644 aaKnown RBP22.68■■□□□ 1.22
POLR2J3-209ENST00000504157 PLEKHD1A6NEE1 506 aa22.67■■□□□ 1.22
POLR2J3-209ENST00000504157 TBC1D32Q96NH3 1257 aa22.67■■□□□ 1.22
POLR2J3-209ENST00000504157 IQGAP3Q86VI3 1631 aa22.67■■□□□ 1.22
POLR2J3-209ENST00000504157 RSPH4AQ5TD94 716 aa22.67■■□□□ 1.22
POLR2J3-209ENST00000504157 MAST1Q9Y2H9 1570 aa22.67■■□□□ 1.22
POLR2J3-209ENST00000504157 TRIM44Q96DX7 344 aaPredicted RBP22.66■■□□□ 1.22
POLR2J3-209ENST00000504157 CLUAP1Q96AJ1 413 aa22.65■■□□□ 1.22
POLR2J3-209ENST00000504157 IQGAP1P46940 1657 aa22.65■■□□□ 1.22
POLR2J3-209ENST00000504157 RGL3Q3MIN7 710 aa22.64■■□□□ 1.21
POLR2J3-209ENST00000504157 UPF2Q9HAU5 1272 aaKnown RBP22.64■■□□□ 1.21
POLR2J3-209ENST00000504157 CDCA8Q53HL2 280 aa22.63■■□□□ 1.21
POLR2J3-209ENST00000504157 CHMP5Q9NZZ3 219 aa22.63■■□□□ 1.21
POLR2J3-209ENST00000504157 BCAR3O75815 825 aa22.63■■□□□ 1.21
POLR2J3-209ENST00000504157 TERF1P54274 439 aa22.63■■□□□ 1.21
POLR2J3-209ENST00000504157 KIAA1211Q6ZU35 1233 aa22.63■■□□□ 1.21
POLR2J3-209ENST00000504157 SPINK5Q9NQ38 1064 aaPredicted RBP22.62■■□□□ 1.21
POLR2J3-209ENST00000504157 SAMD9LQ8IVG5 1584 aa22.61■■□□□ 1.21
POLR2J3-209ENST00000504157 MAP7D2Q96T17 732 aa22.61■■□□□ 1.21
POLR2J3-209ENST00000504157 DDX11L8A8MPP1 907 aa22.61■■□□□ 1.21
POLR2J3-209ENST00000504157 HNRNPMP52272 730 aaKnown RBP eCLIP22.6■■□□□ 1.21
POLR2J3-209ENST00000504157 SCAPERQ9BY12 1400 aa22.58■■□□□ 1.21
POLR2J3-209ENST00000504157 PREX2Q70Z35 1606 aa22.58■■□□□ 1.21
POLR2J3-209ENST00000504157 PMFBP1Q8TBY8 1022 aa22.58■■□□□ 1.2
POLR2J3-209ENST00000504157 OFD1O75665 1012 aa22.57■■□□□ 1.2
POLR2J3-209ENST00000504157 MADDQ8WXG6 1647 aa22.57■■□□□ 1.2
POLR2J3-209ENST00000504157 MYOM1P52179 1685 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms