RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 AXIN2Q9Y2T1 843 aa6.29□□□□□ -1.4
USP46-205ENST00000504078 PSDA5PKW4 1024 aaPredicted RBP6.28□□□□□ -1.4
USP46-205ENST00000504078 NUDT7P0C024 238 aa6.28□□□□□ -1.4
USP46-205ENST00000504078 IRX2Q9BZI1 471 aaPredicted RBP6.28□□□□□ -1.4
USP46-205ENST00000504078 LHX6Q9UPM6 363 aa6.28□□□□□ -1.4
USP46-205ENST00000504078 POGZQ7Z3K3 1410 aa6.27□□□□□ -1.41
USP46-205ENST00000504078 ARHGEF12Q9NZN5 1544 aa6.27□□□□□ -1.41
USP46-205ENST00000504078 SLC34A2O95436 690 aa6.27□□□□□ -1.41
USP46-205ENST00000504078 CEBPAP49715 358 aaPredicted RBP6.27□□□□□ -1.41
USP46-205ENST00000504078 KIF14Q15058 1648 aa6.26□□□□□ -1.41
USP46-205ENST00000504078 IFFO2Q5TF58 517 aa6.26□□□□□ -1.41
USP46-205ENST00000504078 PHF8Q9UPP1 1060 aa6.26□□□□□ -1.41
USP46-205ENST00000504078 ABCA6Q8N139 1617 aa6.25□□□□□ -1.41
USP46-205ENST00000504078 HRO43593 1189 aa6.25□□□□□ -1.41
USP46-205ENST00000504078 PHLDB1Q86UU1 1377 aa6.25□□□□□ -1.41
USP46-205ENST00000504078 C3P01024 1663 aa6.25□□□□□ -1.41
USP46-205ENST00000504078 MYO5CQ9NQX4 1742 aa6.25□□□□□ -1.41
USP46-205ENST00000504078 C9orf84Q5VXU9 1444 aa6.25□□□□□ -1.41
USP46-205ENST00000504078 UHRF1BP1Q6BDS2 1440 aa6.25□□□□□ -1.41
USP46-205ENST00000504078 DIP2CQ9Y2E4 1556 aa6.24□□□□□ -1.41
USP46-205ENST00000504078 PCDHGA4Q9Y5G9 962 aa6.24□□□□□ -1.41
USP46-205ENST00000504078 SCAPERQ9BY12 1400 aa6.24□□□□□ -1.41
USP46-205ENST00000504078 KIF3CO14782 793 aa6.23□□□□□ -1.41
USP46-205ENST00000504078 NLRP6P59044 892 aa6.23□□□□□ -1.41
USP46-205ENST00000504078 IFNLR1Q8IU57 520 aaPredicted RBP6.23□□□□□ -1.41
USP46-205ENST00000504078 STAC3Q96MF2 364 aa6.23□□□□□ -1.41
USP46-205ENST00000504078 LTBP4Q8N2S1 1624 aa6.23□□□□□ -1.41
USP46-205ENST00000504078 KCTD12Q96CX2 325 aaKnown RBP6.22□□□□□ -1.41
USP46-205ENST00000504078 ARHGAP5Q13017 1502 aa6.21□□□□□ -1.42
USP46-205ENST00000504078 RIOK3O14730 519 aaKnown RBP6.21□□□□□ -1.42
USP46-205ENST00000504078 MED1Q15648 1581 aaPredicted RBP6.21□□□□□ -1.42
USP46-205ENST00000504078 ATP10AO60312 1499 aa6.21□□□□□ -1.42
USP46-205ENST00000504078 LRRIQ1Q96JM4 1722 aa6.2□□□□□ -1.42
USP46-205ENST00000504078 KDM5CP41229 1560 aa6.2□□□□□ -1.42
USP46-205ENST00000504078 C2orf72A6NCS6 295 aa6.2□□□□□ -1.42
USP46-205ENST00000504078 VGFO15240 615 aaPredicted RBP6.2□□□□□ -1.42
USP46-205ENST00000504078 CAMSAP1Q5T5Y3 1602 aa6.2□□□□□ -1.42
USP46-205ENST00000504078 MYO3AQ8NEV4 1616 aa6.2□□□□□ -1.42
USP46-205ENST00000504078 MAGI2Q86UL8 1455 aa6.2□□□□□ -1.42
USP46-205ENST00000504078 NCOA1Q15788 1441 aa6.19□□□□□ -1.42
USP46-205ENST00000504078 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.19□□□□□ -1.42
USP46-205ENST00000504078 ZFP91Q96JP5 570 aaPredicted RBP6.19□□□□□ -1.42
USP46-205ENST00000504078 ITSN2Q9NZM3 1697 aa6.19□□□□□ -1.42
USP46-205ENST00000504078 SUPT6HQ7KZ85 1726 aaKnown RBP6.19□□□□□ -1.42
USP46-205ENST00000504078 ZNF518AQ6AHZ1 1483 aa6.18□□□□□ -1.42
USP46-205ENST00000504078 PLEKHD1A6NEE1 506 aa6.18□□□□□ -1.42
USP46-205ENST00000504078 FAM9AQ8IZU1 332 aaPredicted RBP6.18□□□□□ -1.42
USP46-205ENST00000504078 FBXO22Q8NEZ5 403 aa6.18□□□□□ -1.42
USP46-205ENST00000504078 ATP1B4Q9UN42 357 aaPredicted RBP6.18□□□□□ -1.42
USP46-205ENST00000504078 ABCC1P33527 1531 aa6.18□□□□□ -1.42
USP46-205ENST00000504078 ZNF335Q9H4Z2 1342 aaPredicted RBP6.18□□□□□ -1.42
USP46-205ENST00000504078 PREX2Q70Z35 1606 aa6.17□□□□□ -1.42
USP46-205ENST00000504078 PTPRTO14522 1441 aa6.17□□□□□ -1.42
USP46-205ENST00000504078 PLCH2O75038 1416 aa6.17□□□□□ -1.42
USP46-205ENST00000504078 DMRTA1Q5VZB9 504 aa6.17□□□□□ -1.42
USP46-205ENST00000504078 CLTCQ00610 1675 aaKnown RBP6.17□□□□□ -1.42
USP46-205ENST00000504078 CDC42BPBQ9Y5S2 1711 aa6.16□□□□□ -1.42
USP46-205ENST00000504078 REREQ9P2R6 1566 aa6.16□□□□□ -1.42
USP46-205ENST00000504078 A0A0G2JS52 829 aa6.16□□□□□ -1.42
USP46-205ENST00000504078 UBAP1LF5GYI3 381 aa6.16□□□□□ -1.42
USP46-205ENST00000504078 AFAP1Q8N556 730 aa6.16□□□□□ -1.42
USP46-205ENST00000504078 ZNF142P52746 1687 aaPredicted RBP6.16□□□□□ -1.42
USP46-205ENST00000504078 KIDINS220Q9ULH0 1771 aa6.16□□□□□ -1.42
USP46-205ENST00000504078 TRAPPC8Q9Y2L5 1435 aa6.16□□□□□ -1.42
USP46-205ENST00000504078 PSEN2P49810 448 aa6.15□□□□□ -1.42
USP46-205ENST00000504078 NCKAP5LQ9HCH0 1330 aa6.15□□□□□ -1.43
USP46-205ENST00000504078 SYCP2Q9BX26 1530 aa6.15□□□□□ -1.43
USP46-205ENST00000504078 CEP170BQ9Y4F5 1589 aaPredicted RBP6.14□□□□□ -1.43
USP46-205ENST00000504078 PTPN5P54829 565 aa6.14□□□□□ -1.43
USP46-205ENST00000504078 PPP4R3BQ5MIZ7 849 aa6.14□□□□□ -1.43
USP46-205ENST00000504078 TMC2Q8TDI7 906 aa6.14□□□□□ -1.43
USP46-205ENST00000504078 TAOK2Q9UL54 1235 aa6.14□□□□□ -1.43
USP46-205ENST00000504078 IQSEC2Q5JU85 1478 aa6.14□□□□□ -1.43
USP46-205ENST00000504078 MROH2AA6NES4 1674 aa6.14□□□□□ -1.43
USP46-205ENST00000504078 PIP4K2BP78356 416 aa6.13□□□□□ -1.43
USP46-205ENST00000504078 TROQ12816 1431 aaPredicted RBP6.13□□□□□ -1.43
USP46-205ENST00000504078 ARHGAP35Q9NRY4 1499 aa6.13□□□□□ -1.43
USP46-205ENST00000504078 AGLP35573 1532 aa6.13□□□□□ -1.43
USP46-205ENST00000504078 SAMD9LQ8IVG5 1584 aa6.13□□□□□ -1.43
USP46-205ENST00000504078 CDC42BPAQ5VT25 1732 aa6.13□□□□□ -1.43
USP46-205ENST00000504078 POLR1AO95602 1720 aaPredicted RBP6.12□□□□□ -1.43
USP46-205ENST00000504078 CLIP1P30622 1438 aa6.12□□□□□ -1.43
USP46-205ENST00000504078 HSPA1LP34931 641 aa6.12□□□□□ -1.43
USP46-205ENST00000504078 EFCAB2Q5VUJ9 269 aa6.12□□□□□ -1.43
USP46-205ENST00000504078 PTCD2Q8WV60 388 aaKnown RBP6.12□□□□□ -1.43
USP46-205ENST00000504078 RNF25Q96BH1 459 aaPredicted RBP6.12□□□□□ -1.43
USP46-205ENST00000504078 ESF1Q9H501 851 aaKnown RBP6.12□□□□□ -1.43
USP46-205ENST00000504078 NEURL4Q96JN8 1562 aa6.11□□□□□ -1.43
USP46-205ENST00000504078 INO80Q9ULG1 1556 aaPredicted RBP6.1□□□□□ -1.43
USP46-205ENST00000504078 ATP7AQ04656 1500 aa6.1□□□□□ -1.43
USP46-205ENST00000504078 MLH3Q9UHC1 1453 aa6.1□□□□□ -1.43
USP46-205ENST00000504078 Q6ZNB5 142 aa6.1□□□□□ -1.43
USP46-205ENST00000504078 SLC4A5Q9BY07 1137 aa6.1□□□□□ -1.43
USP46-205ENST00000504078 VPS9D1Q9Y2B5 631 aa6.1□□□□□ -1.43
USP46-205ENST00000504078 SETD1AO15047 1707 aaKnown RBP6.1□□□□□ -1.43
USP46-205ENST00000504078 ALKQ9UM73 1620 aa6.1□□□□□ -1.43
USP46-205ENST00000504078 PLXNC1O60486 1568 aa6.1□□□□□ -1.43
USP46-205ENST00000504078 TCOF1Q13428 1488 aaKnown RBP6.09□□□□□ -1.43
USP46-205ENST00000504078 CNTLNQ9NXG0 1405 aa6.09□□□□□ -1.43
USP46-205ENST00000504078 THSD4Q6ZMP0 1018 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms