RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 ANKK1Q8NFD2 765 aa9.32□□□□□ -0.92
SCLT1-206ENST00000503565 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
SCLT1-206ENST00000503565 RCCD1A6NED2 376 aa9.31□□□□□ -0.92
SCLT1-206ENST00000503565 TRIM66O15016 1216 aa9.31□□□□□ -0.92
SCLT1-206ENST00000503565 PTPN5P54829 565 aa9.31□□□□□ -0.92
SCLT1-206ENST00000503565 SWT1Q5T5J6 900 aaKnown RBP9.31□□□□□ -0.92
SCLT1-206ENST00000503565 IL27Q8NEV9 243 aa9.31□□□□□ -0.92
SCLT1-206ENST00000503565 NLRP7Q8WX94 980 aa9.31□□□□□ -0.92
SCLT1-206ENST00000503565 IRF6O14896 467 aa9.3□□□□□ -0.92
SCLT1-206ENST00000503565 MAP2K5Q13163 448 aa9.3□□□□□ -0.92
SCLT1-206ENST00000503565 RBM46Q8TBY0 533 aaKnown RBP9.3□□□□□ -0.92
SCLT1-206ENST00000503565 PDE4DQ08499 809 aa9.29□□□□□ -0.92
SCLT1-206ENST00000503565 TMEM134Q9H6X4 195 aa9.29□□□□□ -0.92
SCLT1-206ENST00000503565 WBP1LQ9NX94 342 aa9.29□□□□□ -0.92
SCLT1-206ENST00000503565 HCSTQ9UBK5 93 aa9.29□□□□□ -0.92
SCLT1-206ENST00000503565 OATP04181 439 aa9.28□□□□□ -0.92
SCLT1-206ENST00000503565 LRCH3Q96II8 777 aa9.28□□□□□ -0.92
SCLT1-206ENST00000503565 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.28□□□□□ -0.92
SCLT1-206ENST00000503565 DNAJB2P25686 324 aa9.27□□□□□ -0.93
SCLT1-206ENST00000503565 MINK1Q8N4C8 1332 aaPredicted RBP9.27□□□□□ -0.93
SCLT1-206ENST00000503565 CCDC102AQ96A19 550 aa9.26□□□□□ -0.93
SCLT1-206ENST00000503565 HPS5Q9UPZ3 1129 aa9.26□□□□□ -0.93
SCLT1-206ENST00000503565 TSR3Q9UJK0 312 aaKnown RBP9.25□□□□□ -0.93
SCLT1-206ENST00000503565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.24□□□□□ -0.93
SCLT1-206ENST00000503565 SLC10A3P09131 477 aa9.23□□□□□ -0.93
SCLT1-206ENST00000503565 FAM117AQ9C073 453 aa9.21□□□□□ -0.94
SCLT1-206ENST00000503565 APLP1P51693 650 aa9.2□□□□□ -0.94
SCLT1-206ENST00000503565 PPP4CP60510 307 aa9.2□□□□□ -0.94
SCLT1-206ENST00000503565 TMUB1Q9BVT8 246 aa9.2□□□□□ -0.94
SCLT1-206ENST00000503565 REPIN1Q9BWE0 567 aaKnown RBP9.2□□□□□ -0.94
SCLT1-206ENST00000503565 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
SCLT1-206ENST00000503565 SLF2Q8IX21 1173 aa9.19□□□□□ -0.94
SCLT1-206ENST00000503565 ZMYND15Q9H091 742 aa9.19□□□□□ -0.94
SCLT1-206ENST00000503565 RNF40O75150 1001 aa9.18□□□□□ -0.94
SCLT1-206ENST00000503565 PLEKHG3A1L390 1219 aa9.17□□□□□ -0.94
SCLT1-206ENST00000503565 MDM2Q00987 491 aaPredicted RBP9.16□□□□□ -0.94
SCLT1-206ENST00000503565 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
SCLT1-206ENST00000503565 AMHR2Q16671 573 aa9.14□□□□□ -0.95
SCLT1-206ENST00000503565 ITGBL1O95965 494 aaPredicted RBP9.13□□□□□ -0.95
SCLT1-206ENST00000503565 TJAP1Q5JTD0 557 aa9.13□□□□□ -0.95
SCLT1-206ENST00000503565 PARP9Q8IXQ6 854 aa9.13□□□□□ -0.95
SCLT1-206ENST00000503565 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
SCLT1-206ENST00000503565 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
SCLT1-206ENST00000503565 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
SCLT1-206ENST00000503565 UBTFP17480 764 aaKnown RBP9.12□□□□□ -0.95
SCLT1-206ENST00000503565 CFHP08603 1231 aa9.11□□□□□ -0.95
SCLT1-206ENST00000503565 FAM217BQ9NTX9 383 aaPredicted RBP9.11□□□□□ -0.95
SCLT1-206ENST00000503565 CD46P15529 392 aa9.1□□□□□ -0.95
SCLT1-206ENST00000503565 DDRGK1Q96HY6 314 aa9.1□□□□□ -0.95
SCLT1-206ENST00000503565 ACTN4O43707 911 aaKnown RBP9.09□□□□□ -0.95
SCLT1-206ENST00000503565 GCGRP47871 477 aa9.09□□□□□ -0.95
SCLT1-206ENST00000503565 ZNF516Q92618 1163 aa9.09□□□□□ -0.95
SCLT1-206ENST00000503565 MTRQ99707 1265 aa9.09□□□□□ -0.95
SCLT1-206ENST00000503565 GPCPD1Q9NPB8 672 aa9.09□□□□□ -0.95
SCLT1-206ENST00000503565 CLCN1P35523 988 aa9.08□□□□□ -0.96
SCLT1-206ENST00000503565 RDH13Q8NBN7 331 aa9.08□□□□□ -0.96
SCLT1-206ENST00000503565 C1orf115Q9H7X2 142 aa9.08□□□□□ -0.96
SCLT1-206ENST00000503565 SLC4A3P48751 1232 aa9.07□□□□□ -0.96
SCLT1-206ENST00000503565 IFFO2Q5TF58 517 aa9.07□□□□□ -0.96
SCLT1-206ENST00000503565 BLOC1S3Q6QNY0 202 aa9.07□□□□□ -0.96
SCLT1-206ENST00000503565 GIGYF2Q6Y7W6 1299 aaKnown RBP9.06□□□□□ -0.96
SCLT1-206ENST00000503565 SULF1Q8IWU6 871 aa9.06□□□□□ -0.96
SCLT1-206ENST00000503565 NECTIN2Q92692 538 aa9.06□□□□□ -0.96
SCLT1-206ENST00000503565 SSTR3P32745 418 aaPredicted RBP9.05□□□□□ -0.96
SCLT1-206ENST00000503565 COPS2P61201 443 aa9.05□□□□□ -0.96
SCLT1-206ENST00000503565 MS4A1P11836 297 aa9.04□□□□□ -0.96
SCLT1-206ENST00000503565 KCNC4Q03721 635 aa9.04□□□□□ -0.96
SCLT1-206ENST00000503565 FUT2Q10981 343 aa9.04□□□□□ -0.96
SCLT1-206ENST00000503565 PUS10Q3MIT2 529 aaKnown RBP9.04□□□□□ -0.96
SCLT1-206ENST00000503565 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
SCLT1-206ENST00000503565 NKX2-3Q8TAU0 364 aa9.04□□□□□ -0.96
SCLT1-206ENST00000503565 PCDHB3Q9Y5E6 796 aa9.04□□□□□ -0.96
SCLT1-206ENST00000503565 TTLL12Q14166 644 aaPredicted RBP9.03□□□□□ -0.96
SCLT1-206ENST00000503565 IL21Q9HBE4 155 aa9.03□□□□□ -0.96
SCLT1-206ENST00000503565 MORN1Q5T089 497 aa9.02□□□□□ -0.97
SCLT1-206ENST00000503565 PRR14Q9BWN1 585 aa9.02□□□□□ -0.97
SCLT1-206ENST00000503565 GOPCQ9HD26 462 aa9.02□□□□□ -0.97
SCLT1-206ENST00000503565 ZPR1O75312 459 aa9.01□□□□□ -0.97
SCLT1-206ENST00000503565 RSPH4AQ5TD94 716 aa9.01□□□□□ -0.97
SCLT1-206ENST00000503565 HLA-CQ95604 372 aa9.01□□□□□ -0.97
SCLT1-206ENST00000503565 A0A0G2JS52 829 aa8.99□□□□□ -0.97
SCLT1-206ENST00000503565 TLL1O43897 1013 aa8.99□□□□□ -0.97
SCLT1-206ENST00000503565 FLIIQ13045 1269 aa8.99□□□□□ -0.97
SCLT1-206ENST00000503565 SCUBE3Q8IX30 993 aa8.99□□□□□ -0.97
SCLT1-206ENST00000503565 ARID3AQ99856 593 aa8.99□□□□□ -0.97
SCLT1-206ENST00000503565 ARID3CA6NKF2 412 aa8.98□□□□□ -0.97
SCLT1-206ENST00000503565 KDM4AO75164 1064 aa8.98□□□□□ -0.97
SCLT1-206ENST00000503565 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
SCLT1-206ENST00000503565 SLC27A5Q9Y2P5 690 aa8.98□□□□□ -0.97
SCLT1-206ENST00000503565 SPIRE2Q8WWL2 714 aa8.97□□□□□ -0.97
SCLT1-206ENST00000503565 THAP11Q96EK4 314 aa8.97□□□□□ -0.97
SCLT1-206ENST00000503565 PODXL2Q9NZ53 605 aa8.97□□□□□ -0.97
SCLT1-206ENST00000503565 BEGAINQ9BUH8 593 aa8.96□□□□□ -0.98
SCLT1-206ENST00000503565 HOXA2O43364 376 aa8.95□□□□□ -0.98
SCLT1-206ENST00000503565 GUCA2AQ02747 115 aa8.95□□□□□ -0.98
SCLT1-206ENST00000503565 APBB1O00213 710 aa8.94□□□□□ -0.98
SCLT1-206ENST00000503565 NR1I2O75469 434 aa8.94□□□□□ -0.98
SCLT1-206ENST00000503565 BRICD5Q6PL45 260 aa8.93□□□□□ -0.98
SCLT1-206ENST00000503565 RNF19BQ6ZMZ0 732 aa8.93□□□□□ -0.98
SCLT1-206ENST00000503565 PCMTD1Q96MG8 357 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms