RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
TOPBP1-203ENST00000503464 FBXO31Q5XUX0 539 aaPredicted RBP9.88□□□□□ -0.83
TOPBP1-203ENST00000503464 DCAF11Q8TEB1 546 aa9.88□□□□□ -0.83
TOPBP1-203ENST00000503464 KIAA1210Q9ULL0 1709 aa9.87□□□□□ -0.83
TOPBP1-203ENST00000503464 POLR1AO95602 1720 aaPredicted RBP9.87□□□□□ -0.83
TOPBP1-203ENST00000503464 RIMS1Q86UR5 1692 aaKnown RBP9.87□□□□□ -0.83
TOPBP1-203ENST00000503464 IQGAP1P46940 1657 aa9.86□□□□□ -0.83
TOPBP1-203ENST00000503464 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
TOPBP1-203ENST00000503464 ARID4BQ4LE39 1312 aaPredicted RBP9.85□□□□□ -0.83
TOPBP1-203ENST00000503464 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
TOPBP1-203ENST00000503464 UBR1Q8IWV7 1749 aa9.85□□□□□ -0.83
TOPBP1-203ENST00000503464 KDM5AP29375 1690 aaKnown RBP9.84□□□□□ -0.83
TOPBP1-203ENST00000503464 IDI1Q13907 227 aa9.84□□□□□ -0.83
TOPBP1-203ENST00000503464 ZNF326Q5BKZ1 582 aaKnown RBP9.84□□□□□ -0.83
TOPBP1-203ENST00000503464 HIRIP3Q9BW71 556 aaPredicted RBP9.84□□□□□ -0.83
TOPBP1-203ENST00000503464 GPRASP1Q5JY77 1395 aa9.84□□□□□ -0.83
TOPBP1-203ENST00000503464 HSPA5P11021 654 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-203ENST00000503464 SLC52A1Q9NWF4 448 aa9.82□□□□□ -0.84
TOPBP1-203ENST00000503464 A2ML1A8K2U0 1454 aa9.82□□□□□ -0.84
TOPBP1-203ENST00000503464 MYO3AQ8NEV4 1616 aa9.82□□□□□ -0.84
TOPBP1-203ENST00000503464 PIK3C2GO75747 1445 aa9.82□□□□□ -0.84
TOPBP1-203ENST00000503464 ADGRF5Q8IZF2 1346 aa9.82□□□□□ -0.84
TOPBP1-203ENST00000503464 USP47Q96K76 1375 aa9.81□□□□□ -0.84
TOPBP1-203ENST00000503464 NBPF1Q3BBV0 1214 aa9.81□□□□□ -0.84
TOPBP1-203ENST00000503464 SETD1AO15047 1707 aaKnown RBP9.81□□□□□ -0.84
TOPBP1-203ENST00000503464 ADGRB1O14514 1584 aa9.8□□□□□ -0.84
TOPBP1-203ENST00000503464 ROCK2O75116 1388 aaKnown RBP9.8□□□□□ -0.84
TOPBP1-203ENST00000503464 TNRQ92752 1358 aa9.8□□□□□ -0.84
TOPBP1-203ENST00000503464 CNKSR2Q8WXI2 1034 aa9.8□□□□□ -0.84
TOPBP1-203ENST00000503464 NRXN3Q9Y4C0 1643 aa9.8□□□□□ -0.84
TOPBP1-203ENST00000503464 ASXL1Q8IXJ9 1541 aa9.8□□□□□ -0.84
TOPBP1-203ENST00000503464 SETBP1Q9Y6X0 1596 aa9.8□□□□□ -0.84
TOPBP1-203ENST00000503464 CHGAP10645 457 aaKnown RBP9.79□□□□□ -0.84
TOPBP1-203ENST00000503464 CEBPAP49715 358 aaPredicted RBP9.79□□□□□ -0.84
TOPBP1-203ENST00000503464 EIF4G2P78344 907 aaKnown RBP eCLIP9.79□□□□□ -0.84
TOPBP1-203ENST00000503464 ZFYVE9O95405 1425 aa9.79□□□□□ -0.84
TOPBP1-203ENST00000503464 RPGRIP1LQ68CZ1 1315 aa9.79□□□□□ -0.84
TOPBP1-203ENST00000503464 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-203ENST00000503464 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
TOPBP1-203ENST00000503464 ZNF142P52746 1687 aaPredicted RBP9.77□□□□□ -0.84
TOPBP1-203ENST00000503464 DIEXFQ68CQ4 756 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-203ENST00000503464 PPP4R3CPQ6ZMV5 832 aa9.77□□□□□ -0.85
TOPBP1-203ENST00000503464 CARD11Q9BXL7 1154 aa9.77□□□□□ -0.85
TOPBP1-203ENST00000503464 ESF1Q9H501 851 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-203ENST00000503464 NLRP1Q9C000 1473 aa9.77□□□□□ -0.85
TOPBP1-203ENST00000503464 ARHGEF28Q8N1W1 1705 aaKnown RBP9.76□□□□□ -0.85
TOPBP1-203ENST00000503464 WASHC2AQ641Q2 1341 aa9.76□□□□□ -0.85
TOPBP1-203ENST00000503464 RIMS2Q9UQ26 1411 aa9.75□□□□□ -0.85
TOPBP1-203ENST00000503464 PTPRMP28827 1452 aa9.75□□□□□ -0.85
TOPBP1-203ENST00000503464 SCAF11Q99590 1463 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-203ENST00000503464 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
TOPBP1-203ENST00000503464 NUTM2DQ5VT03 806 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-203ENST00000503464 CEP170BQ9Y4F5 1589 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-203ENST00000503464 ALKQ9UM73 1620 aa9.74□□□□□ -0.85
TOPBP1-203ENST00000503464 CCDC7Q96M83 1385 aa9.74□□□□□ -0.85
TOPBP1-203ENST00000503464 ARHGAP23Q9P227 1491 aa9.73□□□□□ -0.85
TOPBP1-203ENST00000503464 SLIT1O75093 1534 aa9.73□□□□□ -0.85
TOPBP1-203ENST00000503464 ST20-MTHFSA0A0A6YYL1 179 aa9.73□□□□□ -0.85
TOPBP1-203ENST00000503464 C14orf93Q9H972 538 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-203ENST00000503464 KIF7Q2M1P5 1343 aa9.73□□□□□ -0.85
TOPBP1-203ENST00000503464 QRICH2Q9H0J4 1663 aa9.73□□□□□ -0.85
TOPBP1-203ENST00000503464 TESK2Q96S53 571 aa9.72□□□□□ -0.85
TOPBP1-203ENST00000503464 TMEM2Q9UHN6 1383 aa9.72□□□□□ -0.85
TOPBP1-203ENST00000503464 MYOM1P52179 1685 aa9.71□□□□□ -0.85
TOPBP1-203ENST00000503464 VGFO15240 615 aaPredicted RBP9.71□□□□□ -0.86
TOPBP1-203ENST00000503464 SETD1BQ9UPS6 1966 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-203ENST00000503464 DDX10Q13206 875 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-203ENST00000503464 DISP3Q9P2K9 1392 aa9.7□□□□□ -0.86
TOPBP1-203ENST00000503464 KNDC1Q76NI1 1749 aa9.7□□□□□ -0.86
TOPBP1-203ENST00000503464 STAG3Q9UJ98 1225 aa9.69□□□□□ -0.86
TOPBP1-203ENST00000503464 MED14O60244 1454 aa9.68□□□□□ -0.86
TOPBP1-203ENST00000503464 ADAMTS13Q76LX8 1427 aa9.68□□□□□ -0.86
TOPBP1-203ENST00000503464 TMEM132EQ6IEE7 984 aa9.68□□□□□ -0.86
TOPBP1-203ENST00000503464 LTKP29376 864 aa9.67□□□□□ -0.86
TOPBP1-203ENST00000503464 MIER1Q8N108 512 aa9.67□□□□□ -0.86
TOPBP1-203ENST00000503464 DLC1Q96QB1 1528 aa9.66□□□□□ -0.86
TOPBP1-203ENST00000503464 YTHDC2Q9H6S0 1430 aaKnown RBP9.66□□□□□ -0.86
TOPBP1-203ENST00000503464 PLEKHG1Q9ULL1 1385 aa9.66□□□□□ -0.86
TOPBP1-203ENST00000503464 SBNO2Q9Y2G9 1366 aa9.66□□□□□ -0.86
TOPBP1-203ENST00000503464 TULP4Q9NRJ4 1543 aa9.66□□□□□ -0.86
TOPBP1-203ENST00000503464 METP08581 1390 aa9.65□□□□□ -0.86
TOPBP1-203ENST00000503464 EIF3AQ14152 1382 aaKnown RBP9.65□□□□□ -0.86
TOPBP1-203ENST00000503464 CPS1P31327 1500 aa9.65□□□□□ -0.86
TOPBP1-203ENST00000503464 DIP2AQ14689 1571 aa9.64□□□□□ -0.87
TOPBP1-203ENST00000503464 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.64□□□□□ -0.87
TOPBP1-203ENST00000503464 TRAK1Q9UPV9 953 aa9.64□□□□□ -0.87
TOPBP1-203ENST00000503464 XRN1Q8IZH2 1706 aaKnown RBP9.64□□□□□ -0.87
TOPBP1-203ENST00000503464 TECPR2O15040 1411 aa9.64□□□□□ -0.87
TOPBP1-203ENST00000503464 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
TOPBP1-203ENST00000503464 LRPPRCP42704 1394 aaKnown RBP9.63□□□□□ -0.87
TOPBP1-203ENST00000503464 CENPJQ9HC77 1338 aaPredicted RBP9.62□□□□□ -0.87
TOPBP1-203ENST00000503464 DSG3P32926 999 aa9.62□□□□□ -0.87
TOPBP1-203ENST00000503464 PTPRUQ92729 1446 aa9.62□□□□□ -0.87
TOPBP1-203ENST00000503464 TXNDC2Q86VQ3 553 aa9.61□□□□□ -0.87
TOPBP1-203ENST00000503464 THEMISQ8N1K5 641 aaPredicted RBP9.61□□□□□ -0.87
TOPBP1-203ENST00000503464 ABCC11Q96J66 1382 aa9.61□□□□□ -0.87
TOPBP1-203ENST00000503464 PLEKHH1Q9ULM0 1364 aa9.61□□□□□ -0.87
TOPBP1-203ENST00000503464 CHD2O14647 1828 aaKnown RBP9.61□□□□□ -0.87
TOPBP1-203ENST00000503464 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.6□□□□□ -0.87
TOPBP1-203ENST00000503464 TMF1P82094 1093 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms