RNA–Protein interactions for RNA: ENST00000503137.1

CCDC11P1-201, Transcript of coiled-coil domain containing 11 pseudogene 1, humanhuman

BASIC

Gene CCDC11P1, Length 1,162 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC11P1-201ENST00000503137 PCGF6Q9BYE7 350 aa9.33□□□□□ -0.92
CCDC11P1-201ENST00000503137 CDAN1Q8IWY9 1227 aa9.32□□□□□ -0.92
CCDC11P1-201ENST00000503137 GRIN2AQ12879 1464 aa9.32□□□□□ -0.92
CCDC11P1-201ENST00000503137 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
CCDC11P1-201ENST00000503137 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
CCDC11P1-201ENST00000503137 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
CCDC11P1-201ENST00000503137 CERKQ8TCT0 537 aa9.31□□□□□ -0.92
CCDC11P1-201ENST00000503137 ARAP1Q96P48 1450 aa9.31□□□□□ -0.92
CCDC11P1-201ENST00000503137 KIAA0586Q9BVV6 1533 aa9.31□□□□□ -0.92
CCDC11P1-201ENST00000503137 EMP3P54852 163 aa9.3□□□□□ -0.92
CCDC11P1-201ENST00000503137 CDHR5Q9HBB8 845 aa9.3□□□□□ -0.92
CCDC11P1-201ENST00000503137 LHX6Q9UPM6 363 aa9.3□□□□□ -0.92
CCDC11P1-201ENST00000503137 EFCAB5A4FU69 1503 aa9.3□□□□□ -0.92
CCDC11P1-201ENST00000503137 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
CCDC11P1-201ENST00000503137 TSR1Q2NL82 804 aaKnown RBP9.29□□□□□ -0.92
CCDC11P1-201ENST00000503137 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
CCDC11P1-201ENST00000503137 CTTNBP2Q8WZ74 1663 aa9.28□□□□□ -0.92
CCDC11P1-201ENST00000503137 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.93
CCDC11P1-201ENST00000503137 C6orf132Q5T0Z8 1188 aa9.27□□□□□ -0.93
CCDC11P1-201ENST00000503137 CCDC102AQ96A19 550 aa9.27□□□□□ -0.93
CCDC11P1-201ENST00000503137 FHOD3Q2V2M9 1422 aa9.27□□□□□ -0.93
CCDC11P1-201ENST00000503137 FMN1Q68DA7 1419 aa9.27□□□□□ -0.93
CCDC11P1-201ENST00000503137 IQGAP2Q13576 1575 aa9.27□□□□□ -0.93
CCDC11P1-201ENST00000503137 TTBK1Q5TCY1 1321 aaPredicted RBP9.27□□□□□ -0.93
CCDC11P1-201ENST00000503137 NUP160Q12769 1436 aa9.26□□□□□ -0.93
CCDC11P1-201ENST00000503137 IRF6O14896 467 aa9.26□□□□□ -0.93
CCDC11P1-201ENST00000503137 ADAM33Q9BZ11 813 aa9.26□□□□□ -0.93
CCDC11P1-201ENST00000503137 FAM205CA6NFA0 338 aa9.25□□□□□ -0.93
CCDC11P1-201ENST00000503137 NPDC1Q9NQX5 325 aaPredicted RBP9.25□□□□□ -0.93
CCDC11P1-201ENST00000503137 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
CCDC11P1-201ENST00000503137 TRIM66O15016 1216 aa9.24□□□□□ -0.93
CCDC11P1-201ENST00000503137 KCNH8Q96L42 1107 aa9.24□□□□□ -0.93
CCDC11P1-201ENST00000503137 BCL2L12Q9HB09 334 aa9.24□□□□□ -0.93
CCDC11P1-201ENST00000503137 UGGT2Q9NYU1 1516 aa9.24□□□□□ -0.93
CCDC11P1-201ENST00000503137 CARMIL2Q6F5E8 1435 aa9.23□□□□□ -0.93
CCDC11P1-201ENST00000503137 FECHP22830 423 aa9.23□□□□□ -0.93
CCDC11P1-201ENST00000503137 PTPREP23469 700 aa9.23□□□□□ -0.93
CCDC11P1-201ENST00000503137 CASKIN1Q8WXD9 1431 aa9.22□□□□□ -0.93
CCDC11P1-201ENST00000503137 PDE4DQ08499 809 aa9.22□□□□□ -0.93
CCDC11P1-201ENST00000503137 TMEM132AQ24JP5 1023 aa9.22□□□□□ -0.93
CCDC11P1-201ENST00000503137 DAXXQ9UER7 740 aaPredicted RBP9.22□□□□□ -0.93
CCDC11P1-201ENST00000503137 ERBB3P21860 1342 aa9.22□□□□□ -0.93
CCDC11P1-201ENST00000503137 SAMD9Q5K651 1589 aa9.21□□□□□ -0.93
CCDC11P1-201ENST00000503137 CEP170Q5SW79 1584 aa9.21□□□□□ -0.93
CCDC11P1-201ENST00000503137 PPP1R3GB7ZBB8 358 aa9.21□□□□□ -0.94
CCDC11P1-201ENST00000503137 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.94
CCDC11P1-201ENST00000503137 HS3ST6Q96QI5 342 aa9.21□□□□□ -0.94
CCDC11P1-201ENST00000503137 MAP3K1Q13233 1512 aa9.21□□□□□ -0.94
CCDC11P1-201ENST00000503137 POTEB3A0JP26 581 aa9.2□□□□□ -0.94
CCDC11P1-201ENST00000503137 AMHR2Q16671 573 aa9.2□□□□□ -0.94
CCDC11P1-201ENST00000503137 VARS2Q5ST30 1063 aaKnown RBP9.2□□□□□ -0.94
CCDC11P1-201ENST00000503137 POTEBQ6S5H4 581 aa9.2□□□□□ -0.94
CCDC11P1-201ENST00000503137 FYCO1Q9BQS8 1478 aa9.2□□□□□ -0.94
CCDC11P1-201ENST00000503137 PADI6Q6TGC4 694 aa9.19□□□□□ -0.94
CCDC11P1-201ENST00000503137 PRSS12P56730 875 aa9.18□□□□□ -0.94
CCDC11P1-201ENST00000503137 DISP1Q96F81 1524 aa9.18□□□□□ -0.94
CCDC11P1-201ENST00000503137 PRG4Q92954 1404 aaPredicted RBP9.17□□□□□ -0.94
CCDC11P1-201ENST00000503137 OATP04181 439 aa9.17□□□□□ -0.94
CCDC11P1-201ENST00000503137 CDCA7LQ96GN5 454 aa9.17□□□□□ -0.94
CCDC11P1-201ENST00000503137 CDK11AQ9UQ88 783 aaPredicted RBP9.17□□□□□ -0.94
CCDC11P1-201ENST00000503137 TTLL12Q14166 644 aaPredicted RBP9.16□□□□□ -0.94
CCDC11P1-201ENST00000503137 KDM4CQ9H3R0 1056 aa9.16□□□□□ -0.94
CCDC11P1-201ENST00000503137 TTC13Q8NBP0 860 aa9.15□□□□□ -0.94
CCDC11P1-201ENST00000503137 KCNK17Q96T54 332 aa9.15□□□□□ -0.94
CCDC11P1-201ENST00000503137 GPBP1L1Q9HC44 474 aaPredicted RBP9.15□□□□□ -0.94
CCDC11P1-201ENST00000503137 KIAA0556O60303 1618 aa9.15□□□□□ -0.94
CCDC11P1-201ENST00000503137 LRRC9Q6ZRR7 1453 aa9.15□□□□□ -0.95
CCDC11P1-201ENST00000503137 PTPRGP23470 1445 aa9.14□□□□□ -0.95
CCDC11P1-201ENST00000503137 MTUS2Q5JR59 1369 aa9.14□□□□□ -0.95
CCDC11P1-201ENST00000503137 COL9A1P20849 921 aa9.14□□□□□ -0.95
CCDC11P1-201ENST00000503137 ADGRG1Q9Y653 693 aa9.14□□□□□ -0.95
CCDC11P1-201ENST00000503137 PCF11O94913 1555 aaKnown RBP9.14□□□□□ -0.95
CCDC11P1-201ENST00000503137 TIAM1Q13009 1591 aa9.14□□□□□ -0.95
CCDC11P1-201ENST00000503137 CHD1O14646 1710 aa9.14□□□□□ -0.95
CCDC11P1-201ENST00000503137 CLCN1P35523 988 aa9.13□□□□□ -0.95
CCDC11P1-201ENST00000503137 METTL3Q86U44 580 aaKnown RBP9.13□□□□□ -0.95
CCDC11P1-201ENST00000503137 PARP9Q8IXQ6 854 aa9.13□□□□□ -0.95
CCDC11P1-201ENST00000503137 RBM46Q8TBY0 533 aaKnown RBP9.13□□□□□ -0.95
CCDC11P1-201ENST00000503137 CCDC18Q5T9S5 1454 aa9.13□□□□□ -0.95
CCDC11P1-201ENST00000503137 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
CCDC11P1-201ENST00000503137 PBX2P40425 430 aa9.12□□□□□ -0.95
CCDC11P1-201ENST00000503137 ARID3CA6NKF2 412 aa9.11□□□□□ -0.95
CCDC11P1-201ENST00000503137 TRIM6-TRIM34B2RNG4 842 aa9.11□□□□□ -0.95
CCDC11P1-201ENST00000503137 PXYLP1Q8TE99 480 aa9.11□□□□□ -0.95
CCDC11P1-201ENST00000503137 GPCPD1Q9NPB8 672 aa9.11□□□□□ -0.95
CCDC11P1-201ENST00000503137 HECW1Q76N89 1606 aa9.1□□□□□ -0.95
CCDC11P1-201ENST00000503137 PLEKHD1A6NEE1 506 aa9.1□□□□□ -0.95
CCDC11P1-201ENST00000503137 ARHGAP33O14559 1287 aa9.1□□□□□ -0.95
CCDC11P1-201ENST00000503137 ONECUT3O60422 494 aaPredicted RBP9.1□□□□□ -0.95
CCDC11P1-201ENST00000503137 PACS2Q86VP3 889 aa9.1□□□□□ -0.95
CCDC11P1-201ENST00000503137 DDRGK1Q96HY6 314 aa9.1□□□□□ -0.95
CCDC11P1-201ENST00000503137 EPRSP07814 1512 aaKnown RBP9.1□□□□□ -0.95
CCDC11P1-201ENST00000503137 MMRN1Q13201 1228 aa9.09□□□□□ -0.95
CCDC11P1-201ENST00000503137 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
CCDC11P1-201ENST00000503137 GIGYF2Q6Y7W6 1299 aaKnown RBP9.09□□□□□ -0.95
CCDC11P1-201ENST00000503137 SPNS2Q8IVW8 549 aa9.09□□□□□ -0.95
CCDC11P1-201ENST00000503137 TSKSQ9UJT2 592 aa9.09□□□□□ -0.95
CCDC11P1-201ENST00000503137 CCNB3Q8WWL7 1395 aa9.09□□□□□ -0.95
CCDC11P1-201ENST00000503137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.08□□□□□ -0.96
CCDC11P1-201ENST00000503137 ZNF687Q8N1G0 1237 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms