RNA–Protein interactions for RNA: ENST00000502755.5

PRDM9-202, Transcript of PR/SET domain 9, humanhuman

TSL 4

Gene PRDM9, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-202ENST00000502755 RIMS2Q9UQ26 1411 aa17.05■□□□□ 0.32
PRDM9-202ENST00000502755 RPGRIP1LQ68CZ1 1315 aa17.05■□□□□ 0.32
PRDM9-202ENST00000502755 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
PRDM9-202ENST00000502755 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
PRDM9-202ENST00000502755 SCAF11Q99590 1463 aaKnown RBP17.04■□□□□ 0.32
PRDM9-202ENST00000502755 ZFYVE9O95405 1425 aa17.04■□□□□ 0.32
PRDM9-202ENST00000502755 PPP1R15AO75807 674 aaPredicted RBP17.03■□□□□ 0.32
PRDM9-202ENST00000502755 LTKP29376 864 aa17.03■□□□□ 0.32
PRDM9-202ENST00000502755 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
PRDM9-202ENST00000502755 PPLO60437 1756 aa17.02■□□□□ 0.32
PRDM9-202ENST00000502755 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
PRDM9-202ENST00000502755 SIN3AQ96ST3 1273 aa17.02■□□□□ 0.32
PRDM9-202ENST00000502755 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
PRDM9-202ENST00000502755 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
PRDM9-202ENST00000502755 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
PRDM9-202ENST00000502755 MED14O60244 1454 aa17■□□□□ 0.31
PRDM9-202ENST00000502755 VGFO15240 615 aaPredicted RBP17■□□□□ 0.31
PRDM9-202ENST00000502755 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
PRDM9-202ENST00000502755 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
PRDM9-202ENST00000502755 NPHP4O75161 1426 aaPredicted RBP16.99■□□□□ 0.31
PRDM9-202ENST00000502755 IQGAP1P46940 1657 aa16.99■□□□□ 0.31
PRDM9-202ENST00000502755 BCANQ96GW7 911 aa16.97■□□□□ 0.31
PRDM9-202ENST00000502755 PLEKHG1Q9ULL1 1385 aa16.97■□□□□ 0.31
PRDM9-202ENST00000502755 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
PRDM9-202ENST00000502755 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
PRDM9-202ENST00000502755 MYOM2P54296 1465 aa16.93■□□□□ 0.3
PRDM9-202ENST00000502755 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
PRDM9-202ENST00000502755 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
PRDM9-202ENST00000502755 TONSLQ96HA7 1378 aa16.91■□□□□ 0.3
PRDM9-202ENST00000502755 SETBP1Q9Y6X0 1596 aa16.91■□□□□ 0.3
PRDM9-202ENST00000502755 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
PRDM9-202ENST00000502755 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
PRDM9-202ENST00000502755 SLC26A8Q96RN1 970 aa16.9■□□□□ 0.3
PRDM9-202ENST00000502755 DIP2AQ14689 1571 aa16.89■□□□□ 0.3
PRDM9-202ENST00000502755 TBX22Q9Y458 520 aa16.89■□□□□ 0.29
PRDM9-202ENST00000502755 NRXN3Q9Y4C0 1643 aa16.88■□□□□ 0.29
PRDM9-202ENST00000502755 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
PRDM9-202ENST00000502755 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
PRDM9-202ENST00000502755 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
PRDM9-202ENST00000502755 ALKQ9UM73 1620 aa16.86■□□□□ 0.29
PRDM9-202ENST00000502755 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
PRDM9-202ENST00000502755 LAMC1P11047 1609 aa16.85■□□□□ 0.29
PRDM9-202ENST00000502755 PIK3R4Q99570 1358 aa16.84■□□□□ 0.29
PRDM9-202ENST00000502755 SETD1AO15047 1707 aaKnown RBP16.84■□□□□ 0.29
PRDM9-202ENST00000502755 CHD2O14647 1828 aaKnown RBP16.84■□□□□ 0.29
PRDM9-202ENST00000502755 C14orf93Q9H972 538 aaKnown RBP16.83■□□□□ 0.28
PRDM9-202ENST00000502755 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
PRDM9-202ENST00000502755 PRAG1Q86YV5 1406 aa16.81■□□□□ 0.28
PRDM9-202ENST00000502755 KCNA6P17658 529 aa16.81■□□□□ 0.28
PRDM9-202ENST00000502755 CFAP70Q5T0N1 1121 aa16.81■□□□□ 0.28
PRDM9-202ENST00000502755 KIAA1210Q9ULL0 1709 aa16.81■□□□□ 0.28
PRDM9-202ENST00000502755 METP08581 1390 aa16.8■□□□□ 0.28
PRDM9-202ENST00000502755 STRCP1A6NGW2 1772 aa16.79■□□□□ 0.28
PRDM9-202ENST00000502755 AMOTL2Q9Y2J4 779 aa16.78■□□□□ 0.28
PRDM9-202ENST00000502755 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
PRDM9-202ENST00000502755 CPS1P31327 1500 aa16.77■□□□□ 0.28
PRDM9-202ENST00000502755 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
PRDM9-202ENST00000502755 LTBP4Q8N2S1 1624 aa16.77■□□□□ 0.27
PRDM9-202ENST00000502755 TMEM132EQ6IEE7 984 aa16.76■□□□□ 0.27
PRDM9-202ENST00000502755 TRPM1Q7Z4N2 1603 aa16.75■□□□□ 0.27
PRDM9-202ENST00000502755 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
PRDM9-202ENST00000502755 XRN1Q8IZH2 1706 aaKnown RBP16.75■□□□□ 0.27
PRDM9-202ENST00000502755 NKTRP30414 1462 aaKnown RBP16.74■□□□□ 0.27
PRDM9-202ENST00000502755 ASXL1Q8IXJ9 1541 aa16.74■□□□□ 0.27
PRDM9-202ENST00000502755 LRPPRCP42704 1394 aaKnown RBP16.74■□□□□ 0.27
PRDM9-202ENST00000502755 YTHDC2Q9H6S0 1430 aaKnown RBP16.73■□□□□ 0.27
PRDM9-202ENST00000502755 PROSER2Q86WR7 435 aaPredicted RBP16.73■□□□□ 0.27
PRDM9-202ENST00000502755 STK26Q9P289 416 aa16.73■□□□□ 0.27
PRDM9-202ENST00000502755 ADGRB1O14514 1584 aa16.72■□□□□ 0.27
PRDM9-202ENST00000502755 NBPF1Q3BBV0 1214 aa16.72■□□□□ 0.27
PRDM9-202ENST00000502755 KNDC1Q76NI1 1749 aa16.72■□□□□ 0.27
PRDM9-202ENST00000502755 ABCC11Q96J66 1382 aa16.71■□□□□ 0.27
PRDM9-202ENST00000502755 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
PRDM9-202ENST00000502755 ROCK2O75116 1388 aaKnown RBP16.7■□□□□ 0.26
PRDM9-202ENST00000502755 RALGAPBQ86X10 1494 aa16.69■□□□□ 0.26
PRDM9-202ENST00000502755 TECPR2O15040 1411 aa16.69■□□□□ 0.26
PRDM9-202ENST00000502755 PTCH1Q13635 1447 aa16.69■□□□□ 0.26
PRDM9-202ENST00000502755 XIRP1Q702N8 1843 aaKnown RBP16.68■□□□□ 0.26
PRDM9-202ENST00000502755 CERKQ8TCT0 537 aa16.68■□□□□ 0.26
PRDM9-202ENST00000502755 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
PRDM9-202ENST00000502755 TMEM94Q12767 1356 aa16.67■□□□□ 0.26
PRDM9-202ENST00000502755 DLC1Q96QB1 1528 aa16.67■□□□□ 0.26
PRDM9-202ENST00000502755 TRAK1Q9UPV9 953 aa16.67■□□□□ 0.26
PRDM9-202ENST00000502755 NCOA3Q9Y6Q9 1424 aa16.67■□□□□ 0.26
PRDM9-202ENST00000502755 ROBO2Q9HCK4 1378 aa16.66■□□□□ 0.26
PRDM9-202ENST00000502755 IQSEC2Q5JU85 1478 aa16.66■□□□□ 0.26
PRDM9-202ENST00000502755 GPRASP1Q5JY77 1395 aa16.65■□□□□ 0.26
PRDM9-202ENST00000502755 FAM135BQ49AJ0 1406 aa16.65■□□□□ 0.26
PRDM9-202ENST00000502755 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
PRDM9-202ENST00000502755 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
PRDM9-202ENST00000502755 CARD11Q9BXL7 1154 aa16.65■□□□□ 0.26
PRDM9-202ENST00000502755 POGKQ9P215 609 aa16.64■□□□□ 0.25
PRDM9-202ENST00000502755 ARHGEF28Q8N1W1 1705 aaKnown RBP16.64■□□□□ 0.25
PRDM9-202ENST00000502755 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
PRDM9-202ENST00000502755 PRAM1Q96QH2 718 aa16.63■□□□□ 0.25
PRDM9-202ENST00000502755 MSH6P52701 1360 aa16.61■□□□□ 0.25
PRDM9-202ENST00000502755 NALCNQ8IZF0 1738 aa16.6■□□□□ 0.25
PRDM9-202ENST00000502755 C19orf44Q9H6X5 657 aa16.6■□□□□ 0.25
PRDM9-202ENST00000502755 EIF3AQ14152 1382 aaKnown RBP16.6■□□□□ 0.25
PRDM9-202ENST00000502755 PLEKHH1Q9ULM0 1364 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms