RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 TERF2IPQ9NYB0 399 aa5.81□□□□□ -1.48
NEAT1-202ENST00000501122 TXLNBQ8N3L3 684 aa5.81□□□□□ -1.48
NEAT1-202ENST00000501122 GOLGA6L7A0A1B0GV03 622 aa5.81□□□□□ -1.48
NEAT1-202ENST00000501122 PIK3R5Q8WYR1 880 aa5.81□□□□□ -1.48
NEAT1-202ENST00000501122 MYO6Q9UM54 1294 aa5.81□□□□□ -1.48
NEAT1-202ENST00000501122 CCDC112Q8NEF3 446 aa5.81□□□□□ -1.48
NEAT1-202ENST00000501122 DBN1Q16643 649 aa5.8□□□□□ -1.48
NEAT1-202ENST00000501122 NPHP1O15259 732 aa5.8□□□□□ -1.48
NEAT1-202ENST00000501122 RPAINQ86UA6 219 aa5.8□□□□□ -1.48
NEAT1-202ENST00000501122 ATP6V1AP38606 617 aa5.8□□□□□ -1.48
NEAT1-202ENST00000501122 MCM5P33992 734 aa5.8□□□□□ -1.48
NEAT1-202ENST00000501122 GRPEL1Q9HAV7 217 aa5.8□□□□□ -1.48
NEAT1-202ENST00000501122 NEXNQ0ZGT2 675 aa5.8□□□□□ -1.48
NEAT1-202ENST00000501122 MIPOL1Q8TD10 442 aa5.8□□□□□ -1.48
NEAT1-202ENST00000501122 HSPA5P11021 654 aaKnown RBP5.8□□□□□ -1.48
NEAT1-202ENST00000501122 DRC1Q96MC2 740 aa5.8□□□□□ -1.48
NEAT1-202ENST00000501122 RCAN3Q9UKA8 241 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 KIF16BQ96L93 1317 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 DCAF11Q8TEB1 546 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 WASHC2AQ641Q2 1341 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 RABEP1Q15276 862 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 FOXD4L5Q5VV16 416 aaPredicted RBP5.79□□□□□ -1.48
NEAT1-202ENST00000501122 FOXD4L4Q8WXT5 416 aaPredicted RBP5.79□□□□□ -1.48
NEAT1-202ENST00000501122 RBBP5Q15291 538 aaKnown RBP5.79□□□□□ -1.48
NEAT1-202ENST00000501122 LMOD2Q6P5Q4 547 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 FMNL3Q8IVF7 1028 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 STAC3Q96MF2 364 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 MAP2K2P36507 400 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 IBSPP21815 317 aaPredicted RBP5.79□□□□□ -1.48
NEAT1-202ENST00000501122 GBP2P32456 591 aaPredicted RBP5.79□□□□□ -1.48
NEAT1-202ENST00000501122 SMC4Q9NTJ3 1288 aa5.79□□□□□ -1.48
NEAT1-202ENST00000501122 POLR3GO15318 223 aaPredicted RBP5.79□□□□□ -1.48
NEAT1-202ENST00000501122 EFCC1Q9HA90 598 aa5.78□□□□□ -1.48
NEAT1-202ENST00000501122 ZNHIT6Q9NWK9 470 aaKnown RBP5.78□□□□□ -1.48
NEAT1-202ENST00000501122 KRT222Q8N1A0 295 aa5.78□□□□□ -1.48
NEAT1-202ENST00000501122 IVLP07476 585 aa5.78□□□□□ -1.48
NEAT1-202ENST00000501122 CNKSR2Q8WXI2 1034 aa5.78□□□□□ -1.48
NEAT1-202ENST00000501122 ZNF853P0CG23 659 aa5.78□□□□□ -1.48
NEAT1-202ENST00000501122 RWDD1Q9H446 243 aaPredicted RBP5.78□□□□□ -1.48
NEAT1-202ENST00000501122 NEBLO76041 1014 aa5.77□□□□□ -1.48
NEAT1-202ENST00000501122 CT47B1P0C2W7 299 aaPredicted RBP5.77□□□□□ -1.48
NEAT1-202ENST00000501122 TSR1Q2NL82 804 aaKnown RBP5.77□□□□□ -1.49
NEAT1-202ENST00000501122 KIF2AO00139 706 aaPredicted RBP5.77□□□□□ -1.49
NEAT1-202ENST00000501122 EIF3JO75822 258 aaKnown RBP5.77□□□□□ -1.49
NEAT1-202ENST00000501122 PAF1Q8N7H5 531 aa5.77□□□□□ -1.49
NEAT1-202ENST00000501122 TCHPQ9BT92 498 aa5.77□□□□□ -1.49
NEAT1-202ENST00000501122 WDR66Q8TBY9 1149 aa5.77□□□□□ -1.49
NEAT1-202ENST00000501122 RNF168Q8IYW5 571 aaPredicted RBP5.77□□□□□ -1.49
NEAT1-202ENST00000501122 EIF4G2P78344 907 aaKnown RBP eCLIP5.77□□□□□ -1.496e-24■■■■■ 29.2
NEAT1-202ENST00000501122 FEZ1Q99689 392 aa5.77□□□□□ -1.49
NEAT1-202ENST00000501122 MICALCLQ6ZW33 695 aa5.77□□□□□ -1.49
NEAT1-202ENST00000501122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.77□□□□□ -1.49
NEAT1-202ENST00000501122 UTP14CQ5TAP6 766 aaKnown RBP5.77□□□□□ -1.49
NEAT1-202ENST00000501122 RNF20Q5VTR2 975 aa5.77□□□□□ -1.49
NEAT1-202ENST00000501122 AP1ARQ63HQ0 302 aa5.77□□□□□ -1.49
NEAT1-202ENST00000501122 GOLGA6L9A6NEM1 432 aa5.76□□□□□ -1.49
NEAT1-202ENST00000501122 NUP133Q8WUM0 1156 aa5.76□□□□□ -1.49
NEAT1-202ENST00000501122 EZRP15311 586 aaKnown RBP5.76□□□□□ -1.49
NEAT1-202ENST00000501122 TONSLQ96HA7 1378 aa5.76□□□□□ -1.49
NEAT1-202ENST00000501122 OGFRQ9NZT2 677 aa5.76□□□□□ -1.49
NEAT1-202ENST00000501122 CLASRPQ8N2M8 674 aaKnown RBP5.76□□□□□ -1.49
NEAT1-202ENST00000501122 SENP3Q9H4L4 574 aaPredicted RBP5.76□□□□□ -1.49
NEAT1-202ENST00000501122 LOC102724159A0A0B4J2E5 919 aa5.76□□□□□ -1.49
NEAT1-202ENST00000501122 PWP2Q15269 919 aaKnown RBP5.76□□□□□ -1.49
NEAT1-202ENST00000501122 RNF214Q8ND24 703 aa5.76□□□□□ -1.49
NEAT1-202ENST00000501122 LUZP1Q86V48 1076 aa5.76□□□□□ -1.49
NEAT1-202ENST00000501122 A0A1B0GUA9 196 aa5.76□□□□□ -1.49
NEAT1-202ENST00000501122 PRIMPOLQ96LW4 560 aa5.76□□□□□ -1.49
NEAT1-202ENST00000501122 OFD1O75665 1012 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 MFAP1P55081 439 aaKnown RBP5.75□□□□□ -1.49
NEAT1-202ENST00000501122 KIF3CO14782 793 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 RPUSD2Q8IZ73 545 aaKnown RBP5.75□□□□□ -1.49
NEAT1-202ENST00000501122 BECN2A8MW95 431 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 CCDC184Q52MB2 194 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 SAMD1Q6SPF0 538 aaPredicted RBP5.75□□□□□ -1.49
NEAT1-202ENST00000501122 IGSF3O75054 1194 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 CAGE1Q8TC20 777 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 TMCO3Q6UWJ1 677 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 TSPY4P0CV99 314 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 TSPY10P0CW01 314 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 BMS1Q14692 1282 aaKnown RBP5.75□□□□□ -1.49
NEAT1-202ENST00000501122 DMTNQ08495 405 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 GBP6Q6ZN66 633 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 CEP120Q8N960 986 aa5.75□□□□□ -1.49
NEAT1-202ENST00000501122 NAA25Q14CX7 972 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 C10orf67Q8IYJ2 551 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 RRAGDQ9NQL2 400 aaPredicted RBP5.74□□□□□ -1.49
NEAT1-202ENST00000501122 NUCB2P80303 420 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 RSPH14Q9UHP6 348 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 WASHC2CQ9Y4E1 1318 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 ATP6V1DQ9Y5K8 247 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 MCM4P33991 863 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 ANKRD18AQ8IVF6 992 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 ZMAT2Q96NC0 199 aaKnown RBP5.74□□□□□ -1.49
NEAT1-202ENST00000501122 CENPQQ7L2Z9 268 aaPredicted RBP5.74□□□□□ -1.49
NEAT1-202ENST00000501122 RASSF8Q8NHQ8 419 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 ERLIN1O75477 346 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 ARMCX6Q7L4S7 300 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 CCDC146Q8IYE0 955 aa5.74□□□□□ -1.49
NEAT1-202ENST00000501122 IPO7O95373 1038 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms