RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 TRPM1Q7Z4N2 1603 aa21.6■■□□□ 1.05
ZCCHC3-201ENST00000500893 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.59■■□□□ 1.05
ZCCHC3-201ENST00000500893 MAGI2Q86UL8 1455 aa21.59■■□□□ 1.05
ZCCHC3-201ENST00000500893 DUSP27Q5VZP5 1158 aa21.59■■□□□ 1.05
ZCCHC3-201ENST00000500893 DUOX2Q9NRD8 1548 aa21.59■■□□□ 1.05
ZCCHC3-201ENST00000500893 NPM1P06748 294 aaKnown RBP eCLIP21.57■■□□□ 1.04
ZCCHC3-201ENST00000500893 CHD1O14646 1710 aa21.57■■□□□ 1.04
ZCCHC3-201ENST00000500893 ABCC2Q92887 1545 aa21.56■■□□□ 1.04
ZCCHC3-201ENST00000500893 MORC1Q86VD1 984 aa21.56■■□□□ 1.04
ZCCHC3-201ENST00000500893 BCL2L13Q9BXK5 485 aa21.56■■□□□ 1.04
ZCCHC3-201ENST00000500893 SLC12A5Q9H2X9 1139 aa21.56■■□□□ 1.04
ZCCHC3-201ENST00000500893 DMRT2Q9Y5R5 561 aa21.54■■□□□ 1.04
ZCCHC3-201ENST00000500893 STK26Q9P289 416 aa21.53■■□□□ 1.04
ZCCHC3-201ENST00000500893 CARD14Q9BXL6 1004 aa21.53■■□□□ 1.04
ZCCHC3-201ENST00000500893 EIF3AQ14152 1382 aaKnown RBP21.52■■□□□ 1.04
ZCCHC3-201ENST00000500893 PRDM15P57071 1507 aaPredicted RBP21.51■■□□□ 1.03
ZCCHC3-201ENST00000500893 CLUAP1Q96AJ1 413 aa21.5■■□□□ 1.03
ZCCHC3-201ENST00000500893 COG6Q9Y2V7 657 aa21.5■■□□□ 1.03
ZCCHC3-201ENST00000500893 SLFN5Q08AF3 891 aa21.49■■□□□ 1.03
ZCCHC3-201ENST00000500893 PANK1Q8TE04 598 aa21.49■■□□□ 1.03
ZCCHC3-201ENST00000500893 WDR7Q9Y4E6 1490 aa21.49■■□□□ 1.03
ZCCHC3-201ENST00000500893 MS4A1P11836 297 aa21.49■■□□□ 1.03
ZCCHC3-201ENST00000500893 SCAF11Q99590 1463 aaKnown RBP21.49■■□□□ 1.03
ZCCHC3-201ENST00000500893 MYO5CQ9NQX4 1742 aa21.49■■□□□ 1.03
ZCCHC3-201ENST00000500893 MAST1Q9Y2H9 1570 aa21.48■■□□□ 1.03
ZCCHC3-201ENST00000500893 BLMP54132 1417 aaPredicted RBP21.48■■□□□ 1.03
ZCCHC3-201ENST00000500893 UGGT1Q9NYU2 1555 aa21.47■■□□□ 1.03
ZCCHC3-201ENST00000500893 ATP10AO60312 1499 aa21.46■■□□□ 1.03
ZCCHC3-201ENST00000500893 CENPQQ7L2Z9 268 aaPredicted RBP21.46■■□□□ 1.03
ZCCHC3-201ENST00000500893 UNC13BO14795 1591 aa21.46■■□□□ 1.03
ZCCHC3-201ENST00000500893 CENPJQ9HC77 1338 aaPredicted RBP21.45■■□□□ 1.02
ZCCHC3-201ENST00000500893 FANCAO15360 1455 aa21.45■■□□□ 1.02
ZCCHC3-201ENST00000500893 RTN4Q9NQC3 1192 aaKnown RBP21.45■■□□□ 1.02
ZCCHC3-201ENST00000500893 IQGAP3Q86VI3 1631 aa21.44■■□□□ 1.02
ZCCHC3-201ENST00000500893 E9PCH4 1651 aa21.43■■□□□ 1.02
ZCCHC3-201ENST00000500893 PRKCSHP14314 528 aaPredicted RBP21.42■■□□□ 1.02
ZCCHC3-201ENST00000500893 EIF2AK4Q9P2K8 1649 aaKnown RBP21.42■■□□□ 1.02
ZCCHC3-201ENST00000500893 U2SURPO15042 1029 aaKnown RBP21.42■■□□□ 1.02
ZCCHC3-201ENST00000500893 U2AF1L5P0DN76 240 aaPredicted RBP21.42■■□□□ 1.02
ZCCHC3-201ENST00000500893 U2AF1Q01081 240 aaKnown RBP eCLIP21.42■■□□□ 1.02
ZCCHC3-201ENST00000500893 E9PSI1 815 aa21.41■■□□□ 1.02
ZCCHC3-201ENST00000500893 ADGRL1O94910 1474 aa21.41■■□□□ 1.02
ZCCHC3-201ENST00000500893 MTHFSP49914 203 aa21.41■■□□□ 1.02
ZCCHC3-201ENST00000500893 RAPGEF3O95398 923 aa21.4■■□□□ 1.02
ZCCHC3-201ENST00000500893 CABP2Q9NPB3 220 aa21.4■■□□□ 1.02
ZCCHC3-201ENST00000500893 ZMYM4Q5VZL5 1548 aa21.39■■□□□ 1.02
ZCCHC3-201ENST00000500893 ABCC1P33527 1531 aa21.39■■□□□ 1.01
ZCCHC3-201ENST00000500893 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.01
ZCCHC3-201ENST00000500893 DDRGK1Q96HY6 314 aa21.39■■□□□ 1.01
ZCCHC3-201ENST00000500893 ZCCHC11Q5TAX3 1644 aaKnown RBP21.38■■□□□ 1.01
ZCCHC3-201ENST00000500893 TCP11L2Q8N4U5 519 aa21.38■■□□□ 1.01
ZCCHC3-201ENST00000500893 NOS1P29475 1434 aa21.38■■□□□ 1.01
ZCCHC3-201ENST00000500893 SRPK2P78362 688 aaKnown RBP21.38■■□□□ 1.01
ZCCHC3-201ENST00000500893 FAM161AQ3B820 660 aa21.38■■□□□ 1.01
ZCCHC3-201ENST00000500893 PLXNC1O60486 1568 aa21.38■■□□□ 1.01
ZCCHC3-201ENST00000500893 PPM1GO15355 546 aaPredicted RBP21.37■■□□□ 1.01
ZCCHC3-201ENST00000500893 CFAP65Q6ZU64 1925 aaKnown RBP21.37■■□□□ 1.01
ZCCHC3-201ENST00000500893 WWC1Q8IX03 1113 aa21.37■■□□□ 1.01
ZCCHC3-201ENST00000500893 TNNQ9UQP3 1299 aa21.37■■□□□ 1.01
ZCCHC3-201ENST00000500893 IGHDP01880 384 aa21.37■■□□□ 1.01
ZCCHC3-201ENST00000500893 NSD3Q9BZ95 1437 aa21.36■■□□□ 1.01
ZCCHC3-201ENST00000500893 ZNF521Q96K83 1311 aa21.35■■□□□ 1.01
ZCCHC3-201ENST00000500893 CFAP53Q96M91 514 aa21.34■■□□□ 1.01
ZCCHC3-201ENST00000500893 STAC3Q96MF2 364 aa21.34■■□□□ 1.01
ZCCHC3-201ENST00000500893 KDM2BQ8NHM5 1336 aa21.33■■□□□ 1.01
ZCCHC3-201ENST00000500893 GGNBP2Q9H3C7 697 aa21.32■■□□□ 1
ZCCHC3-201ENST00000500893 CLTCL1P53675 1640 aa21.31■■□□□ 1
ZCCHC3-201ENST00000500893 STAG3Q9UJ98 1225 aa21.31■■□□□ 1
ZCCHC3-201ENST00000500893 MINK1Q8N4C8 1332 aaPredicted RBP21.3■■□□□ 1
ZCCHC3-201ENST00000500893 MADDQ8WXG6 1647 aa21.3■■□□□ 1
ZCCHC3-201ENST00000500893 TSR2Q969E8 191 aaKnown RBP21.29■■□□□ 1
ZCCHC3-201ENST00000500893 ATP7AQ04656 1500 aa21.29■■□□□ 1
ZCCHC3-201ENST00000500893 ZFYVE16Q7Z3T8 1539 aa21.29■■□□□ 1
ZCCHC3-201ENST00000500893 SLC24A1O60721 1099 aa21.29■■□□□ 1
ZCCHC3-201ENST00000500893 C8orf34Q49A92 452 aa21.29■■□□□ 1
ZCCHC3-201ENST00000500893 RUNDC1Q96C34 613 aa21.29■■□□□ 1
ZCCHC3-201ENST00000500893 NKTRP30414 1462 aaKnown RBP21.28■■□□□ 1
ZCCHC3-201ENST00000500893 TRPM2O94759 1503 aa21.28■■□□□ 1
ZCCHC3-201ENST00000500893 RTEL1-TNFRSF6BF6WH68 1400 aa21.28■■□□□ 1
ZCCHC3-201ENST00000500893 PTPRTO14522 1441 aa21.28■■□□□ 1
ZCCHC3-201ENST00000500893 ASXL2Q76L83 1435 aa21.28■■□□□ 1
ZCCHC3-201ENST00000500893 POGKQ9P215 609 aa21.28■■□□□ 1
ZCCHC3-201ENST00000500893 PIK3C2GO75747 1445 aa21.27■■□□□ 1
ZCCHC3-201ENST00000500893 CGNL1Q0VF96 1302 aa21.27■■□□□ 1
ZCCHC3-201ENST00000500893 SPRYD3Q8NCJ5 442 aa21.27■■□□□ 1
ZCCHC3-201ENST00000500893 ERVK-7P63135 1459 aa21.27■■□□□ 1
ZCCHC3-201ENST00000500893 FTSJ3Q8IY81 847 aaKnown RBP21.27■□□□□ 0.99
ZCCHC3-201ENST00000500893 SLKQ9H2G2 1235 aaPredicted RBP21.26■□□□□ 0.99
ZCCHC3-201ENST00000500893 IL27Q8NEV9 243 aa21.26■□□□□ 0.99
ZCCHC3-201ENST00000500893 ARXQ96QS3 562 aa21.26■□□□□ 0.99
ZCCHC3-201ENST00000500893 NFKBIBQ15653 356 aa21.25■□□□□ 0.99
ZCCHC3-201ENST00000500893 MLECQ14165 292 aa21.25■□□□□ 0.99
ZCCHC3-201ENST00000500893 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
ZCCHC3-201ENST00000500893 SHROOM2Q13796 1616 aa21.24■□□□□ 0.99
ZCCHC3-201ENST00000500893 RLBP1P12271 317 aa21.24■□□□□ 0.99
ZCCHC3-201ENST00000500893 C14orf93Q9H972 538 aaKnown RBP21.23■□□□□ 0.99
ZCCHC3-201ENST00000500893 FBLN1P23142 703 aa21.23■□□□□ 0.99
ZCCHC3-201ENST00000500893 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
ZCCHC3-201ENST00000500893 EVC2Q86UK5 1308 aa21.22■□□□□ 0.99
ZCCHC3-201ENST00000500893 SEC24BO95487 1268 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms