RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 MAP3K4Q9Y6R4 1608 aa5.63□□□□□ -1.51
CLTC-209ENST00000498711 ABCA8O94911 1581 aa5.63□□□□□ -1.51
CLTC-209ENST00000498711 PCMTD1Q96MG8 357 aaPredicted RBP5.63□□□□□ -1.51
CLTC-209ENST00000498711 CARMIL1Q5VZK9 1371 aa5.63□□□□□ -1.51
CLTC-209ENST00000498711 PLB1Q6P1J6 1458 aa5.63□□□□□ -1.51
CLTC-209ENST00000498711 LRRC9Q6ZRR7 1453 aa5.63□□□□□ -1.51
CLTC-209ENST00000498711 TTBK1Q5TCY1 1321 aaPredicted RBP5.63□□□□□ -1.51
CLTC-209ENST00000498711 FECHP22830 423 aa5.63□□□□□ -1.51
CLTC-209ENST00000498711 DISP1Q96F81 1524 aa5.63□□□□□ -1.51
CLTC-209ENST00000498711 PDIA4P13667 645 aaKnown RBP5.62□□□□□ -1.51
CLTC-209ENST00000498711 GIGYF2Q6Y7W6 1299 aaKnown RBP5.62□□□□□ -1.51
CLTC-209ENST00000498711 NPM2Q86SE8 214 aaKnown RBP5.62□□□□□ -1.51
CLTC-209ENST00000498711 PTGER2P43116 358 aa5.62□□□□□ -1.51
CLTC-209ENST00000498711 DPY19L2Q6NUT2 758 aa5.62□□□□□ -1.51
CLTC-209ENST00000498711 SETD5Q9C0A6 1442 aa5.62□□□□□ -1.51
CLTC-209ENST00000498711 TRAK2O60296 914 aa5.61□□□□□ -1.51
CLTC-209ENST00000498711 GABBR2O75899 941 aa5.61□□□□□ -1.51
CLTC-209ENST00000498711 CCDC82Q8N4S0 544 aa5.61□□□□□ -1.51
CLTC-209ENST00000498711 C2orf72A6NCS6 295 aa5.61□□□□□ -1.51
CLTC-209ENST00000498711 KIF3CO14782 793 aa5.61□□□□□ -1.51
CLTC-209ENST00000498711 CLUAP1Q96AJ1 413 aa5.61□□□□□ -1.51
CLTC-209ENST00000498711 TRIM35Q9UPQ4 493 aa5.61□□□□□ -1.51
CLTC-209ENST00000498711 ZBTB7CA1YPR0 619 aa5.61□□□□□ -1.51
CLTC-209ENST00000498711 MS4A1P11836 297 aa5.61□□□□□ -1.51
CLTC-209ENST00000498711 SUPT16HQ9Y5B9 1047 aaKnown RBP5.61□□□□□ -1.51
CLTC-209ENST00000498711 ZCCHC11Q5TAX3 1644 aaKnown RBP5.6□□□□□ -1.51
CLTC-209ENST00000498711 RAB3GAP2Q9H2M9 1393 aa5.6□□□□□ -1.51
CLTC-209ENST00000498711 PTGDRQ13258 359 aa5.6□□□□□ -1.51
CLTC-209ENST00000498711 BMP2KQ9NSY1 1161 aaPredicted RBP5.6□□□□□ -1.51
CLTC-209ENST00000498711 PPRC1Q5VV67 1664 aaKnown RBP5.6□□□□□ -1.51
CLTC-209ENST00000498711 CFAP74Q9C0B2 1584 aa5.6□□□□□ -1.51
CLTC-209ENST00000498711 MCM6Q14566 821 aa5.6□□□□□ -1.51
CLTC-209ENST00000498711 DDX12PQ92771 950 aa5.6□□□□□ -1.51
CLTC-209ENST00000498711 PDCD7Q8N8D1 485 aaKnown RBP5.59□□□□□ -1.51
CLTC-209ENST00000498711 TMEM121BQ9BXQ6 578 aaPredicted RBP5.59□□□□□ -1.51
CLTC-209ENST00000498711 TEX14Q8IWB6 1497 aa5.59□□□□□ -1.51
CLTC-209ENST00000498711 UACAQ9BZF9 1416 aa5.59□□□□□ -1.51
CLTC-209ENST00000498711 SH3D19Q5HYK7 790 aa5.59□□□□□ -1.51
CLTC-209ENST00000498711 UPF1Q92900 1129 aaKnown RBP eCLIP5.59□□□□□ -1.512e-36■■□□□ 13.3
CLTC-209ENST00000498711 FYCO1Q9BQS8 1478 aa5.58□□□□□ -1.52
CLTC-209ENST00000498711 PPP1R15AO75807 674 aaPredicted RBP5.58□□□□□ -1.52
CLTC-209ENST00000498711 BOLA1Q9Y3E2 137 aa5.58□□□□□ -1.52
CLTC-209ENST00000498711 PHLDB1Q86UU1 1377 aa5.58□□□□□ -1.52
CLTC-209ENST00000498711 CASKIN1Q8WXD9 1431 aa5.58□□□□□ -1.52
CLTC-209ENST00000498711 MAGI3Q5TCQ9 1506 aa5.58□□□□□ -1.52
CLTC-209ENST00000498711 EVX2Q03828 476 aa5.58□□□□□ -1.52
CLTC-209ENST00000498711 ARAP3Q8WWN8 1544 aa5.58□□□□□ -1.52
CLTC-209ENST00000498711 G3V3G9 751 aa5.58□□□□□ -1.52
CLTC-209ENST00000498711 OXER1Q8TDS5 423 aa5.58□□□□□ -1.52
CLTC-209ENST00000498711 PCF11O94913 1555 aaKnown RBP5.57□□□□□ -1.52
CLTC-209ENST00000498711 JPH4Q96JJ6 628 aa5.57□□□□□ -1.52
CLTC-209ENST00000498711 CCDC9Q9Y3X0 531 aaKnown RBP5.57□□□□□ -1.52
CLTC-209ENST00000498711 ABCA9Q8IUA7 1624 aa5.57□□□□□ -1.52
CLTC-209ENST00000498711 CCER2I3L3R5 266 aa5.57□□□□□ -1.52
CLTC-209ENST00000498711 TBC1D12O60347 775 aa5.57□□□□□ -1.52
CLTC-209ENST00000498711 PROSER2Q86WR7 435 aaPredicted RBP5.57□□□□□ -1.52
CLTC-209ENST00000498711 YTHDC1Q96MU7 727 aaKnown RBP5.57□□□□□ -1.52
CLTC-209ENST00000498711 REPIN1Q9BWE0 567 aaKnown RBP5.57□□□□□ -1.52
CLTC-209ENST00000498711 RAPGEF6Q8TEU7 1601 aa5.56□□□□□ -1.52
CLTC-209ENST00000498711 CLCN1P35523 988 aa5.56□□□□□ -1.52
CLTC-209ENST00000498711 PTPRGP23470 1445 aa5.56□□□□□ -1.52
CLTC-209ENST00000498711 PRIM1P49642 420 aaKnown RBP5.56□□□□□ -1.52
CLTC-209ENST00000498711 KDM6BO15054 1643 aa5.55□□□□□ -1.52
CLTC-209ENST00000498711 EPRSP07814 1512 aaKnown RBP5.55□□□□□ -1.52
CLTC-209ENST00000498711 WDR7Q9Y4E6 1490 aa5.55□□□□□ -1.52
CLTC-209ENST00000498711 EVI5O60447 810 aa5.55□□□□□ -1.52
CLTC-209ENST00000498711 TMUB1Q9BVT8 246 aa5.55□□□□□ -1.52
CLTC-209ENST00000498711 GPCPD1Q9NPB8 672 aa5.55□□□□□ -1.52
CLTC-209ENST00000498711 SKIV2LQ15477 1246 aaKnown RBP5.54□□□□□ -1.52
CLTC-209ENST00000498711 IRX5P78411 483 aaPredicted RBP5.54□□□□□ -1.52
CLTC-209ENST00000498711 OCEL1Q9H607 264 aa5.54□□□□□ -1.52
CLTC-209ENST00000498711 HECW1Q76N89 1606 aa5.53□□□□□ -1.52
CLTC-209ENST00000498711 RAD21O60216 631 aa5.53□□□□□ -1.52
CLTC-209ENST00000498711 CYB5RLQ6IPT4 315 aa5.53□□□□□ -1.52
CLTC-209ENST00000498711 SERPINA10Q9UK55 444 aa5.53□□□□□ -1.52
CLTC-209ENST00000498711 HFM1A2PYH4 1435 aa5.53□□□□□ -1.52
CLTC-209ENST00000498711 TCOF1Q13428 1488 aaKnown RBP5.53□□□□□ -1.52
CLTC-209ENST00000498711 FNBP4Q8N3X1 1017 aaPredicted RBP5.53□□□□□ -1.52
CLTC-209ENST00000498711 NECTIN2Q92692 538 aa5.53□□□□□ -1.52
CLTC-209ENST00000498711 ZNF777Q9ULD5 760 aaPredicted RBP5.53□□□□□ -1.52
CLTC-209ENST00000498711 NEO1Q92859 1461 aa5.52□□□□□ -1.53
CLTC-209ENST00000498711 MDM2Q00987 491 aaPredicted RBP5.52□□□□□ -1.53
CLTC-209ENST00000498711 CCDC97Q96F63 343 aaPredicted RBP5.52□□□□□ -1.53
CLTC-209ENST00000498711 LRRIQ1Q96JM4 1722 aa5.52□□□□□ -1.53
CLTC-209ENST00000498711 PTPN23Q9H3S7 1636 aa5.52□□□□□ -1.53
CLTC-209ENST00000498711 ASXL2Q76L83 1435 aa5.52□□□□□ -1.53
CLTC-209ENST00000498711 AKNAQ7Z591 1439 aa5.52□□□□□ -1.53
CLTC-209ENST00000498711 SSTR3P32745 418 aaPredicted RBP5.52□□□□□ -1.53
CLTC-209ENST00000498711 IER5LQ5T953 404 aa5.52□□□□□ -1.53
CLTC-209ENST00000498711 ZMYM4Q5VZL5 1548 aa5.52□□□□□ -1.53
CLTC-209ENST00000498711 FGD6Q6ZV73 1430 aa5.51□□□□□ -1.53
CLTC-209ENST00000498711 EN1Q05925 392 aaPredicted RBP5.51□□□□□ -1.53
CLTC-209ENST00000498711 POM121Q96HA1 1249 aa5.51□□□□□ -1.53
CLTC-209ENST00000498711 ATP1B4Q9UN42 357 aaPredicted RBP5.51□□□□□ -1.53
CLTC-209ENST00000498711 PTPRKQ15262 1439 aa5.51□□□□□ -1.53
CLTC-209ENST00000498711 GALR2O43603 387 aaPredicted RBP5.51□□□□□ -1.53
CLTC-209ENST00000498711 BEGAINQ9BUH8 593 aa5.51□□□□□ -1.53
CLTC-209ENST00000498711 CDHR5Q9HBB8 845 aa5.51□□□□□ -1.53
CLTC-209ENST00000498711 FMN1Q68DA7 1419 aa5.51□□□□□ -1.53
CLTC-209ENST00000498711 PHOX2BQ99453 314 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms