RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-213ENST00000498524 STAC3Q96MF2 364 aa5.31□□□□□ -1.56
ANKRD28-213ENST00000498524 QTRT2Q9H974 415 aaKnown RBP5.3□□□□□ -1.56
ANKRD28-213ENST00000498524 CHIC2Q9UKJ5 165 aa5.3□□□□□ -1.56
ANKRD28-213ENST00000498524 TBX22Q9Y458 520 aa5.3□□□□□ -1.56
ANKRD28-213ENST00000498524 PAXIP1Q6ZW49 1069 aaPredicted RBP5.3□□□□□ -1.56
ANKRD28-213ENST00000498524 CNKSR2Q8WXI2 1034 aa5.3□□□□□ -1.56
ANKRD28-213ENST00000498524 CCDC141Q6ZP82 1450 aa5.3□□□□□ -1.56
ANKRD28-213ENST00000498524 ADAMTS2O95450 1211 aa5.29□□□□□ -1.56
ANKRD28-213ENST00000498524 KIF21BO75037 1637 aa5.29□□□□□ -1.56
ANKRD28-213ENST00000498524 NEFMP07197 916 aa5.29□□□□□ -1.56
ANKRD28-213ENST00000498524 DDX10Q13206 875 aaKnown RBP5.29□□□□□ -1.56
ANKRD28-213ENST00000498524 USP21Q9UK80 565 aa5.29□□□□□ -1.56
ANKRD28-213ENST00000498524 RPGRIP1LQ68CZ1 1315 aa5.29□□□□□ -1.56
ANKRD28-213ENST00000498524 NCOA1Q15788 1441 aa5.29□□□□□ -1.56
ANKRD28-213ENST00000498524 C16orf71Q8IYS4 520 aaPredicted RBP5.28□□□□□ -1.56
ANKRD28-213ENST00000498524 TMX4Q9H1E5 349 aaPredicted RBP5.28□□□□□ -1.56
ANKRD28-213ENST00000498524 DHX37Q8IY37 1157 aaKnown RBP5.28□□□□□ -1.56
ANKRD28-213ENST00000498524 SLC26A8Q96RN1 970 aa5.28□□□□□ -1.56
ANKRD28-213ENST00000498524 ARHGAP35Q9NRY4 1499 aa5.28□□□□□ -1.56
ANKRD28-213ENST00000498524 PAK3O75914 559 aaPredicted RBP5.28□□□□□ -1.56
ANKRD28-213ENST00000498524 SHANK2Q9UPX8 1470 aa5.28□□□□□ -1.56
ANKRD28-213ENST00000498524 KDM5DQ9BY66 1539 aa5.28□□□□□ -1.56
ANKRD28-213ENST00000498524 KIF15Q9NS87 1388 aa5.27□□□□□ -1.57
ANKRD28-213ENST00000498524 PKNOX2Q96KN3 472 aa5.27□□□□□ -1.57
ANKRD28-213ENST00000498524 TSHZ2Q9NRE2 1034 aa5.27□□□□□ -1.57
ANKRD28-213ENST00000498524 RTL5Q5HYW3 569 aaPredicted RBP5.27□□□□□ -1.57
ANKRD28-213ENST00000498524 TONSLQ96HA7 1378 aa5.27□□□□□ -1.57
ANKRD28-213ENST00000498524 PIK3R4Q99570 1358 aa5.27□□□□□ -1.57
ANKRD28-213ENST00000498524 ESCO1Q5FWF5 840 aa5.27□□□□□ -1.57
ANKRD28-213ENST00000498524 STK32BQ9NY57 414 aa5.27□□□□□ -1.57
ANKRD28-213ENST00000498524 RIMS1Q86UR5 1692 aaKnown RBP5.27□□□□□ -1.57
ANKRD28-213ENST00000498524 DHX57Q6P158 1386 aaKnown RBP5.26□□□□□ -1.57
ANKRD28-213ENST00000498524 MSH5O43196 834 aa5.26□□□□□ -1.57
ANKRD28-213ENST00000498524 PRDM11Q9NQV5 511 aa5.26□□□□□ -1.57
ANKRD28-213ENST00000498524 ABCA9Q8IUA7 1624 aa5.26□□□□□ -1.57
ANKRD28-213ENST00000498524 CDCA7Q9BWT1 371 aaPredicted RBP5.26□□□□□ -1.57
ANKRD28-213ENST00000498524 SETD5Q9C0A6 1442 aa5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 NPHP1O15259 732 aa5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 TMEM94Q12767 1356 aa5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 SCAF11Q99590 1463 aaKnown RBP5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 NCOA3Q9Y6Q9 1424 aa5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 NUP153P49790 1475 aaKnown RBP5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 TTC37Q6PGP7 1564 aa5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 MAP3K4Q9Y6R4 1608 aa5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 EHBP1L1Q8N3D4 1523 aa5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 SRPK2P78362 688 aaKnown RBP5.25□□□□□ -1.57
ANKRD28-213ENST00000498524 NUP155O75694 1391 aa5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 EIF4G2P78344 907 aaKnown RBP eCLIP5.24□□□□□ -1.576e-8■■■■■ 27.4
ANKRD28-213ENST00000498524 HNRNPUQ00839 825 aaKnown RBP eCLIP5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 SAMD1Q6SPF0 538 aaPredicted RBP5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 BCL11BQ9C0K0 894 aaPredicted RBP5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 AMOTL2Q9Y2J4 779 aa5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 ZMYM4Q5VZL5 1548 aa5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 FAM135BQ49AJ0 1406 aa5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 AFF2P51816 1311 aa5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 SPON1Q9HCB6 807 aa5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 MADDQ8WXG6 1647 aa5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 TCOF1Q13428 1488 aaKnown RBP5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 FGD6Q6ZV73 1430 aa5.24□□□□□ -1.57
ANKRD28-213ENST00000498524 FBXO31Q5XUX0 539 aaPredicted RBP5.23□□□□□ -1.57
ANKRD28-213ENST00000498524 CCER2I3L3R5 266 aa5.23□□□□□ -1.57
ANKRD28-213ENST00000498524 CDCA8Q53HL2 280 aa5.23□□□□□ -1.57
ANKRD28-213ENST00000498524 UGGT1Q9NYU2 1555 aa5.23□□□□□ -1.57
ANKRD28-213ENST00000498524 CTTNBP2Q8WZ74 1663 aa5.23□□□□□ -1.57
ANKRD28-213ENST00000498524 ANKRD30BQ9BXX2 1392 aa5.23□□□□□ -1.57
ANKRD28-213ENST00000498524 CAMSAP1Q5T5Y3 1602 aa5.22□□□□□ -1.57
ANKRD28-213ENST00000498524 FAM196AQ6ZSG2 479 aa5.22□□□□□ -1.57
ANKRD28-213ENST00000498524 COL17A1Q9UMD9 1497 aaPredicted RBP5.22□□□□□ -1.57
ANKRD28-213ENST00000498524 NPM3O75607 178 aaKnown RBP5.22□□□□□ -1.57
ANKRD28-213ENST00000498524 ARHGEF10O15013 1369 aa5.22□□□□□ -1.57
ANKRD28-213ENST00000498524 TMEM2Q9UHN6 1383 aa5.22□□□□□ -1.57
ANKRD28-213ENST00000498524 NLRP13Q86W25 1043 aa5.22□□□□□ -1.57
ANKRD28-213ENST00000498524 RBM19Q9Y4C8 960 aaKnown RBP5.22□□□□□ -1.57
ANKRD28-213ENST00000498524 ATP7AQ04656 1500 aa5.21□□□□□ -1.57
ANKRD28-213ENST00000498524 YY1P25490 414 aa5.21□□□□□ -1.57
ANKRD28-213ENST00000498524 ANP32AP39687 249 aaKnown RBP5.21□□□□□ -1.57
ANKRD28-213ENST00000498524 GPR162Q16538 588 aa5.21□□□□□ -1.57
ANKRD28-213ENST00000498524 STK26Q9P289 416 aa5.21□□□□□ -1.57
ANKRD28-213ENST00000498524 KRT27Q7Z3Y8 459 aa5.21□□□□□ -1.58
ANKRD28-213ENST00000498524 PZPP20742 1482 aa5.21□□□□□ -1.58
ANKRD28-213ENST00000498524 RAB3GAP2Q9H2M9 1393 aa5.21□□□□□ -1.58
ANKRD28-213ENST00000498524 GRIN3BO60391 1043 aa5.21□□□□□ -1.58
ANKRD28-213ENST00000498524 HDGFL2Q7Z4V5 671 aaPredicted RBP5.21□□□□□ -1.58
ANKRD28-213ENST00000498524 KIF13AQ9H1H9 1805 aa5.21□□□□□ -1.58
ANKRD28-213ENST00000498524 BCORL1Q5H9F3 1711 aa5.2□□□□□ -1.58
ANKRD28-213ENST00000498524 ROCK1Q13464 1354 aa5.2□□□□□ -1.58
ANKRD28-213ENST00000498524 ARHGEF12Q9NZN5 1544 aa5.2□□□□□ -1.58
ANKRD28-213ENST00000498524 KANK4Q5T7N3 995 aaPredicted RBP5.2□□□□□ -1.58
ANKRD28-213ENST00000498524 CDK13Q14004 1512 aaKnown RBP5.2□□□□□ -1.58
ANKRD28-213ENST00000498524 PREX1Q8TCU6 1659 aa5.2□□□□□ -1.58
ANKRD28-213ENST00000498524 RIMS2Q9UQ26 1411 aa5.2□□□□□ -1.58
ANKRD28-213ENST00000498524 IGSF3O75054 1194 aa5.19□□□□□ -1.58
ANKRD28-213ENST00000498524 IDI1Q13907 227 aa5.19□□□□□ -1.58
ANKRD28-213ENST00000498524 FLAD1Q8NFF5 587 aa5.19□□□□□ -1.58
ANKRD28-213ENST00000498524 PHF8Q9UPP1 1060 aa5.19□□□□□ -1.58
ANKRD28-213ENST00000498524 KRT28Q7Z3Y7 464 aa5.19□□□□□ -1.58
ANKRD28-213ENST00000498524 BCCIPQ9P287 314 aaKnown RBP eCLIP5.19□□□□□ -1.58
ANKRD28-213ENST00000498524 ERBINQ96RT1 1412 aa5.18□□□□□ -1.58
ANKRD28-213ENST00000498524 RGL3Q3MIN7 710 aa5.18□□□□□ -1.58
ANKRD28-213ENST00000498524 ERICH6BQ5W0A0 696 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms