RNA–Protein interactions for RNA: ENST00000498251.2

CACNA1D-207, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-207ENST00000498251 TET3O43151 1660 aa16.28■□□□□ 0.2
CACNA1D-207ENST00000498251 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
CACNA1D-207ENST00000498251 KANK1Q14678 1352 aa16.26■□□□□ 0.19
CACNA1D-207ENST00000498251 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
CACNA1D-207ENST00000498251 ABCC5O15440 1437 aa16.26■□□□□ 0.19
CACNA1D-207ENST00000498251 COL16A1Q07092 1604 aaPredicted RBP16.25■□□□□ 0.19
CACNA1D-207ENST00000498251 NKTRP30414 1462 aaKnown RBP16.24■□□□□ 0.19
CACNA1D-207ENST00000498251 ERBINQ96RT1 1412 aa16.24■□□□□ 0.19
CACNA1D-207ENST00000498251 NWD1Q149M9 1564 aa16.24■□□□□ 0.19
CACNA1D-207ENST00000498251 LOC105371045A0A1W2PR82 267 aa16.23■□□□□ 0.19
CACNA1D-207ENST00000498251 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
CACNA1D-207ENST00000498251 ZNF772Q68DY9 489 aaPredicted RBP16.23■□□□□ 0.19
CACNA1D-207ENST00000498251 ADGRB3O60242 1522 aa16.23■□□□□ 0.19
CACNA1D-207ENST00000498251 RXRBP28702 533 aa16.22■□□□□ 0.19
CACNA1D-207ENST00000498251 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.18
CACNA1D-207ENST00000498251 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
CACNA1D-207ENST00000498251 SPATA31A6Q5VVP1 1343 aa16.19■□□□□ 0.18
CACNA1D-207ENST00000498251 MYO5BQ9ULV0 1848 aa16.19■□□□□ 0.18
CACNA1D-207ENST00000498251 KDM5AP29375 1690 aaKnown RBP16.19■□□□□ 0.18
CACNA1D-207ENST00000498251 DAPK1P53355 1430 aa16.19■□□□□ 0.18
CACNA1D-207ENST00000498251 RIMS2Q9UQ26 1411 aa16.19■□□□□ 0.18
CACNA1D-207ENST00000498251 SRCAPQ6ZRS2 3230 aa16.19■□□□□ 0.18
CACNA1D-207ENST00000498251 PTPN23Q9H3S7 1636 aa16.18■□□□□ 0.18
CACNA1D-207ENST00000498251 NOS1P29475 1434 aa16.18■□□□□ 0.18
CACNA1D-207ENST00000498251 AFF2P51816 1311 aa16.18■□□□□ 0.18
CACNA1D-207ENST00000498251 ATF3P18847 181 aa16.17■□□□□ 0.18
CACNA1D-207ENST00000498251 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
CACNA1D-207ENST00000498251 CHD2O14647 1828 aaKnown RBP16.17■□□□□ 0.18
CACNA1D-207ENST00000498251 PLEKHG1Q9ULL1 1385 aa16.16■□□□□ 0.18
CACNA1D-207ENST00000498251 ZFYVE9O95405 1425 aa16.15■□□□□ 0.18
CACNA1D-207ENST00000498251 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
CACNA1D-207ENST00000498251 GCC2Q8IWJ2 1684 aa16.14■□□□□ 0.18
CACNA1D-207ENST00000498251 LMTK2Q8IWU2 1503 aa16.14■□□□□ 0.18
CACNA1D-207ENST00000498251 ANKRD30AQ9BXX3 1397 aa16.14■□□□□ 0.17
CACNA1D-207ENST00000498251 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
CACNA1D-207ENST00000498251 C8orf37Q96NL8 207 aa16.14■□□□□ 0.17
CACNA1D-207ENST00000498251 SLC52A1Q9NWF4 448 aa16.14■□□□□ 0.17
CACNA1D-207ENST00000498251 FGD6Q6ZV73 1430 aa16.13■□□□□ 0.17
CACNA1D-207ENST00000498251 CADPS2Q86UW7 1296 aa16.13■□□□□ 0.17
CACNA1D-207ENST00000498251 SHPRHQ149N8 1683 aa16.12■□□□□ 0.17
CACNA1D-207ENST00000498251 C19orf44Q9H6X5 657 aa16.12■□□□□ 0.17
CACNA1D-207ENST00000498251 AHDC1Q5TGY3 1603 aaPredicted RBP16.12■□□□□ 0.17
CACNA1D-207ENST00000498251 TBX22Q9Y458 520 aa16.11■□□□□ 0.17
CACNA1D-207ENST00000498251 RGS12O14924 1447 aa16.11■□□□□ 0.17
CACNA1D-207ENST00000498251 QTRT2Q9H974 415 aaKnown RBP16.1■□□□□ 0.17
CACNA1D-207ENST00000498251 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
CACNA1D-207ENST00000498251 ADAMTS13Q76LX8 1427 aa16.1■□□□□ 0.17
CACNA1D-207ENST00000498251 ADAMTS2O95450 1211 aa16.09■□□□□ 0.17
CACNA1D-207ENST00000498251 FAM50AQ14320 339 aaKnown RBP16.09■□□□□ 0.17
CACNA1D-207ENST00000498251 DIP2AQ14689 1571 aa16.09■□□□□ 0.17
CACNA1D-207ENST00000498251 PTPRUQ92729 1446 aa16.08■□□□□ 0.16
CACNA1D-207ENST00000498251 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
CACNA1D-207ENST00000498251 HDGFP51858 240 aaKnown RBP16.07■□□□□ 0.16
CACNA1D-207ENST00000498251 APLP2Q06481 763 aa16.06■□□□□ 0.16
CACNA1D-207ENST00000498251 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
CACNA1D-207ENST00000498251 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.04■□□□□ 0.16
CACNA1D-207ENST00000498251 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
CACNA1D-207ENST00000498251 NCOA3Q9Y6Q9 1424 aa16.03■□□□□ 0.16
CACNA1D-207ENST00000498251 RBM6P78332 1123 aaKnown RBP16.03■□□□□ 0.16
CACNA1D-207ENST00000498251 NGLY1Q96IV0 654 aa16.03■□□□□ 0.16
CACNA1D-207ENST00000498251 ANKRD50Q9ULJ7 1429 aa16.02■□□□□ 0.16
CACNA1D-207ENST00000498251 MST1RQ04912 1400 aa16.01■□□□□ 0.15
CACNA1D-207ENST00000498251 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
CACNA1D-207ENST00000498251 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
CACNA1D-207ENST00000498251 LRRC59Q96AG4 307 aaKnown RBP16■□□□□ 0.15
CACNA1D-207ENST00000498251 TRPM2O94759 1503 aa15.99■□□□□ 0.15
CACNA1D-207ENST00000498251 SETD5Q9C0A6 1442 aa15.99■□□□□ 0.15
CACNA1D-207ENST00000498251 SETBP1Q9Y6X0 1596 aa15.97■□□□□ 0.15
CACNA1D-207ENST00000498251 ZNF326Q5BKZ1 582 aaKnown RBP15.97■□□□□ 0.15
CACNA1D-207ENST00000498251 E9PCH4 1651 aa15.97■□□□□ 0.15
CACNA1D-207ENST00000498251 METP08581 1390 aa15.97■□□□□ 0.15
CACNA1D-207ENST00000498251 NHSL1Q5SYE7 1610 aa15.97■□□□□ 0.15
CACNA1D-207ENST00000498251 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
CACNA1D-207ENST00000498251 UNC13BO14795 1591 aa15.96■□□□□ 0.15
CACNA1D-207ENST00000498251 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
CACNA1D-207ENST00000498251 USP21Q9UK80 565 aa15.96■□□□□ 0.15
CACNA1D-207ENST00000498251 ATAD2Q6PL18 1390 aa15.96■□□□□ 0.15
CACNA1D-207ENST00000498251 PIK3R4Q99570 1358 aa15.96■□□□□ 0.15
CACNA1D-207ENST00000498251 ITGAEP38570 1179 aa15.93■□□□□ 0.14
CACNA1D-207ENST00000498251 ORAI2Q96SN7 254 aa15.93■□□□□ 0.14
CACNA1D-207ENST00000498251 XRN1Q8IZH2 1706 aaKnown RBP15.93■□□□□ 0.14
CACNA1D-207ENST00000498251 NRXN3Q9Y4C0 1643 aa15.93■□□□□ 0.14
CACNA1D-207ENST00000498251 DCCP43146 1447 aa15.93■□□□□ 0.14
CACNA1D-207ENST00000498251 NUP155O75694 1391 aa15.9■□□□□ 0.14
CACNA1D-207ENST00000498251 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
CACNA1D-207ENST00000498251 TRPC5Q9UL62 973 aaPredicted RBP15.9■□□□□ 0.14
CACNA1D-207ENST00000498251 ADGRL3Q9HAR2 1447 aa15.9■□□□□ 0.14
CACNA1D-207ENST00000498251 NALCNQ8IZF0 1738 aa15.9■□□□□ 0.14
CACNA1D-207ENST00000498251 EP400Q96L91 3159 aa15.89■□□□□ 0.13
CACNA1D-207ENST00000498251 C1orf167Q5SNV9 1468 aa15.89■□□□□ 0.13
CACNA1D-207ENST00000498251 PLEKHG5O94827 1062 aa15.87■□□□□ 0.13
CACNA1D-207ENST00000498251 ATRNO75882 1429 aa15.85■□□□□ 0.13
CACNA1D-207ENST00000498251 IQGAP3Q86VI3 1631 aa15.84■□□□□ 0.13
CACNA1D-207ENST00000498251 NUTM2FA1L443 756 aa15.84■□□□□ 0.13
CACNA1D-207ENST00000498251 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
CACNA1D-207ENST00000498251 FNBP4Q8N3X1 1017 aaPredicted RBP15.83■□□□□ 0.12
CACNA1D-207ENST00000498251 SOS2Q07890 1332 aaPredicted RBP15.83■□□□□ 0.12
CACNA1D-207ENST00000498251 ROBO2Q9HCK4 1378 aa15.83■□□□□ 0.12
CACNA1D-207ENST00000498251 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
CACNA1D-207ENST00000498251 ESCO1Q5FWF5 840 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms