RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 SIN3AQ96ST3 1273 aa28.59■■■□□ 2.17
HLA-DPB1-217ENST00000498038 STRCQ7RTU9 1775 aa28.59■■■□□ 2.17
HLA-DPB1-217ENST00000498038 PPP1R15AO75807 674 aaPredicted RBP28.58■■■□□ 2.17
HLA-DPB1-217ENST00000498038 SPATA31E1Q6ZUB1 1445 aa28.58■■■□□ 2.17
HLA-DPB1-217ENST00000498038 ZFYVE9O95405 1425 aa28.57■■■□□ 2.16
HLA-DPB1-217ENST00000498038 SCAF11Q99590 1463 aaKnown RBP28.57■■■□□ 2.16
HLA-DPB1-217ENST00000498038 NEUROD1Q13562 356 aa28.56■■■□□ 2.16
HLA-DPB1-217ENST00000498038 RPGRIP1LQ68CZ1 1315 aa28.55■■■□□ 2.16
HLA-DPB1-217ENST00000498038 DMRT2Q9Y5R5 561 aa28.55■■■□□ 2.16
HLA-DPB1-217ENST00000498038 POLR1AO95602 1720 aaPredicted RBP28.55■■■□□ 2.16
HLA-DPB1-217ENST00000498038 CCER1Q8TC90 406 aaPredicted RBP28.54■■■□□ 2.16
HLA-DPB1-217ENST00000498038 SENP3Q9H4L4 574 aaPredicted RBP28.53■■■□□ 2.16
HLA-DPB1-217ENST00000498038 BCANQ96GW7 911 aa28.52■■■□□ 2.16
HLA-DPB1-217ENST00000498038 NEURL4Q96JN8 1562 aa28.52■■■□□ 2.16
HLA-DPB1-217ENST00000498038 NPHP4O75161 1426 aaPredicted RBP28.51■■■□□ 2.15
HLA-DPB1-217ENST00000498038 NEXMIFQ5QGS0 1516 aa28.5■■■□□ 2.15
HLA-DPB1-217ENST00000498038 MED14O60244 1454 aa28.49■■■□□ 2.15
HLA-DPB1-217ENST00000498038 VGFO15240 615 aaPredicted RBP28.49■■■□□ 2.15
HLA-DPB1-217ENST00000498038 PLEKHG1Q9ULL1 1385 aa28.45■■■□□ 2.14
HLA-DPB1-217ENST00000498038 DCAF11Q8TEB1 546 aa28.44■■■□□ 2.14
HLA-DPB1-217ENST00000498038 PPLO60437 1756 aa28.44■■■□□ 2.14
HLA-DPB1-217ENST00000498038 IQGAP1P46940 1657 aa28.43■■■□□ 2.14
HLA-DPB1-217ENST00000498038 KDM2AQ9Y2K7 1162 aa28.43■■■□□ 2.14
HLA-DPB1-217ENST00000498038 CLSPNQ9HAW4 1339 aa28.43■■■□□ 2.14
HLA-DPB1-217ENST00000498038 SLC26A8Q96RN1 970 aa28.41■■■□□ 2.14
HLA-DPB1-217ENST00000498038 ADGRF5Q8IZF2 1346 aa28.4■■■□□ 2.14
HLA-DPB1-217ENST00000498038 IFT172Q9UG01 1749 aa28.39■■■□□ 2.14
HLA-DPB1-217ENST00000498038 L3MBTL2Q969R5 705 aa28.37■■■□□ 2.13
HLA-DPB1-217ENST00000498038 STAC3Q96MF2 364 aa28.35■■■□□ 2.13
HLA-DPB1-217ENST00000498038 TONSLQ96HA7 1378 aa28.34■■■□□ 2.13
HLA-DPB1-217ENST00000498038 TBX22Q9Y458 520 aa28.33■■■□□ 2.13
HLA-DPB1-217ENST00000498038 MYOM2P54296 1465 aa28.33■■■□□ 2.13
HLA-DPB1-217ENST00000498038 ADAMTS13Q76LX8 1427 aa28.32■■■□□ 2.12
HLA-DPB1-217ENST00000498038 SETBP1Q9Y6X0 1596 aa28.31■■■□□ 2.12
HLA-DPB1-217ENST00000498038 NRXN3Q9Y4C0 1643 aa28.29■■■□□ 2.12
HLA-DPB1-217ENST00000498038 ZNF335Q9H4Z2 1342 aaPredicted RBP28.27■■■□□ 2.12
HLA-DPB1-217ENST00000498038 NRXN1Q9ULB1 1477 aa28.27■■■□□ 2.12
HLA-DPB1-217ENST00000498038 PIK3C2GO75747 1445 aa28.26■■■□□ 2.12
HLA-DPB1-217ENST00000498038 DIP2AQ14689 1571 aa28.26■■■□□ 2.11
HLA-DPB1-217ENST00000498038 ALKQ9UM73 1620 aa28.25■■■□□ 2.11
HLA-DPB1-217ENST00000498038 CFAP70Q5T0N1 1121 aa28.23■■■□□ 2.11
HLA-DPB1-217ENST00000498038 C14orf93Q9H972 538 aaKnown RBP28.22■■■□□ 2.11
HLA-DPB1-217ENST00000498038 METP08581 1390 aa28.22■■■□□ 2.11
HLA-DPB1-217ENST00000498038 KCNA6P17658 529 aa28.2■■■□□ 2.1
HLA-DPB1-217ENST00000498038 TIMELESSQ9UNS1 1208 aa28.19■■■□□ 2.1
HLA-DPB1-217ENST00000498038 PIK3R4Q99570 1358 aa28.19■■■□□ 2.1
HLA-DPB1-217ENST00000498038 PRAG1Q86YV5 1406 aa28.18■■■□□ 2.1
HLA-DPB1-217ENST00000498038 TMEM132EQ6IEE7 984 aa28.17■■■□□ 2.1
HLA-DPB1-217ENST00000498038 ILDR1Q86SU0 546 aaPredicted RBP28.17■■■□□ 2.1
HLA-DPB1-217ENST00000498038 AMOTL2Q9Y2J4 779 aa28.17■■■□□ 2.1
HLA-DPB1-217ENST00000498038 SETD1AO15047 1707 aaKnown RBP28.15■■■□□ 2.1
HLA-DPB1-217ENST00000498038 PTPRUQ92729 1446 aa28.15■■■□□ 2.1
HLA-DPB1-217ENST00000498038 CHD2O14647 1828 aaKnown RBP28.13■■■□□ 2.09
HLA-DPB1-217ENST00000498038 LAMC1P11047 1609 aa28.13■■■□□ 2.09
HLA-DPB1-217ENST00000498038 LTBP4Q8N2S1 1624 aa28.13■■■□□ 2.09
HLA-DPB1-217ENST00000498038 STRCP1A6NGW2 1772 aa28.12■■■□□ 2.09
HLA-DPB1-217ENST00000498038 NBPF8Q3BBV2 869 aa28.12■■■□□ 2.09
HLA-DPB1-217ENST00000498038 STK26Q9P289 416 aa28.11■■■□□ 2.09
HLA-DPB1-217ENST00000498038 CPS1P31327 1500 aa28.09■■■□□ 2.09
HLA-DPB1-217ENST00000498038 NWD1Q149M9 1564 aa28.09■■■□□ 2.09
HLA-DPB1-217ENST00000498038 PROSER2Q86WR7 435 aaPredicted RBP28.09■■■□□ 2.09
HLA-DPB1-217ENST00000498038 ASXL1Q8IXJ9 1541 aa28.08■■■□□ 2.08
HLA-DPB1-217ENST00000498038 NBPF1Q3BBV0 1214 aa28.07■■■□□ 2.08
HLA-DPB1-217ENST00000498038 LRPPRCP42704 1394 aaKnown RBP28.05■■■□□ 2.08
HLA-DPB1-217ENST00000498038 RBM33Q96EV2 1170 aaKnown RBP28.05■■■□□ 2.08
HLA-DPB1-217ENST00000498038 YTHDC2Q9H6S0 1430 aaKnown RBP28.05■■■□□ 2.08
HLA-DPB1-217ENST00000498038 KIAA1210Q9ULL0 1709 aa28.05■■■□□ 2.08
HLA-DPB1-217ENST00000498038 NKTRP30414 1462 aaKnown RBP28.04■■■□□ 2.08
HLA-DPB1-217ENST00000498038 XRN1Q8IZH2 1706 aaKnown RBP28.04■■■□□ 2.08
HLA-DPB1-217ENST00000498038 LRRC7Q96NW7 1537 aa28.03■■■□□ 2.08
HLA-DPB1-217ENST00000498038 CERKQ8TCT0 537 aa28.03■■■□□ 2.08
HLA-DPB1-217ENST00000498038 ADGRB1O14514 1584 aa28.03■■■□□ 2.08
HLA-DPB1-217ENST00000498038 ABCC11Q96J66 1382 aa28.01■■■□□ 2.07
HLA-DPB1-217ENST00000498038 TRPM1Q7Z4N2 1603 aa28.01■■■□□ 2.07
HLA-DPB1-217ENST00000498038 TRAK1Q9UPV9 953 aa28■■■□□ 2.07
HLA-DPB1-217ENST00000498038 ROCK2O75116 1388 aaKnown RBP27.99■■■□□ 2.07
HLA-DPB1-217ENST00000498038 TMEM94Q12767 1356 aa27.99■■■□□ 2.07
HLA-DPB1-217ENST00000498038 ROBO2Q9HCK4 1378 aa27.99■■■□□ 2.07
HLA-DPB1-217ENST00000498038 PTCH1Q13635 1447 aa27.96■■■□□ 2.07
HLA-DPB1-217ENST00000498038 C14orf37Q86TY3 774 aa27.96■■■□□ 2.07
HLA-DPB1-217ENST00000498038 TECPR2O15040 1411 aa27.95■■■□□ 2.07
HLA-DPB1-217ENST00000498038 WAPLQ7Z5K2 1190 aa27.95■■■□□ 2.06
HLA-DPB1-217ENST00000498038 SIRT1Q96EB6 747 aa27.94■■■□□ 2.06
HLA-DPB1-217ENST00000498038 RALGAPBQ86X10 1494 aa27.94■■■□□ 2.06
HLA-DPB1-217ENST00000498038 KNDC1Q76NI1 1749 aa27.93■■■□□ 2.06
HLA-DPB1-217ENST00000498038 PRAM1Q96QH2 718 aa27.92■■■□□ 2.06
HLA-DPB1-217ENST00000498038 CARD11Q9BXL7 1154 aa27.92■■■□□ 2.06
HLA-DPB1-217ENST00000498038 POGKQ9P215 609 aa27.92■■■□□ 2.06
HLA-DPB1-217ENST00000498038 FAM135BQ49AJ0 1406 aa27.9■■■□□ 2.06
HLA-DPB1-217ENST00000498038 NCOA3Q9Y6Q9 1424 aa27.9■■■□□ 2.06
HLA-DPB1-217ENST00000498038 XIRP1Q702N8 1843 aaKnown RBP27.9■■■□□ 2.06
HLA-DPB1-217ENST00000498038 PLEKHH1Q9ULM0 1364 aa27.89■■■□□ 2.06
HLA-DPB1-217ENST00000498038 DLC1Q96QB1 1528 aa27.89■■■□□ 2.06
HLA-DPB1-217ENST00000498038 SAFB2Q14151 953 aaKnown RBP eCLIP27.89■■■□□ 2.06
HLA-DPB1-217ENST00000498038 GPRASP1Q5JY77 1395 aa27.88■■■□□ 2.05
HLA-DPB1-217ENST00000498038 IQSEC2Q5JU85 1478 aa27.88■■■□□ 2.05
HLA-DPB1-217ENST00000498038 MSH6P52701 1360 aa27.86■■■□□ 2.05
HLA-DPB1-217ENST00000498038 C19orf44Q9H6X5 657 aa27.86■■■□□ 2.05
HLA-DPB1-217ENST00000498038 ARHGEF28Q8N1W1 1705 aaKnown RBP27.82■■■□□ 2.04
HLA-DPB1-217ENST00000498038 ADGRL3Q9HAR2 1447 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms