RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 NUP155O75694 1391 aa16.95■□□□□ 0.3
ERCC8-208ENST00000497892 NOS1P29475 1434 aa16.95■□□□□ 0.3
ERCC8-208ENST00000497892 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
ERCC8-208ENST00000497892 UBR1Q8IWV7 1749 aa16.93■□□□□ 0.3
ERCC8-208ENST00000497892 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
ERCC8-208ENST00000497892 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
ERCC8-208ENST00000497892 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
ERCC8-208ENST00000497892 POLR1AO95602 1720 aaPredicted RBP16.91■□□□□ 0.3
ERCC8-208ENST00000497892 SPHKAPQ2M3C7 1700 aa16.88■□□□□ 0.29
ERCC8-208ENST00000497892 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
ERCC8-208ENST00000497892 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
ERCC8-208ENST00000497892 PTPRTO14522 1441 aa16.85■□□□□ 0.29
ERCC8-208ENST00000497892 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
ERCC8-208ENST00000497892 THEMISQ8N1K5 641 aaPredicted RBP16.84■□□□□ 0.29
ERCC8-208ENST00000497892 SLIT1O75093 1534 aa16.84■□□□□ 0.29
ERCC8-208ENST00000497892 PIP4P2Q8N4L2 257 aa16.83■□□□□ 0.28
ERCC8-208ENST00000497892 ARHGAP23Q9P227 1491 aa16.83■□□□□ 0.28
ERCC8-208ENST00000497892 SSUH2Q9Y2M2 353 aa16.83■□□□□ 0.28
ERCC8-208ENST00000497892 PKD2Q13563 968 aa16.82■□□□□ 0.28
ERCC8-208ENST00000497892 SLC52A1Q9NWF4 448 aa16.82■□□□□ 0.28
ERCC8-208ENST00000497892 TMEM131LA2VDJ0 1609 aa16.81■□□□□ 0.28
ERCC8-208ENST00000497892 TRPM2O94759 1503 aa16.81■□□□□ 0.28
ERCC8-208ENST00000497892 IDI1Q13907 227 aa16.81■□□□□ 0.28
ERCC8-208ENST00000497892 TRIM52Q96A61 297 aa16.81■□□□□ 0.28
ERCC8-208ENST00000497892 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
ERCC8-208ENST00000497892 MYO5BQ9ULV0 1848 aa16.81■□□□□ 0.28
ERCC8-208ENST00000497892 RAB3GAP2Q9H2M9 1393 aa16.8■□□□□ 0.28
ERCC8-208ENST00000497892 NCKAP5LQ9HCH0 1330 aa16.8■□□□□ 0.28
ERCC8-208ENST00000497892 MED14O60244 1454 aa16.8■□□□□ 0.28
ERCC8-208ENST00000497892 ACIN1Q9UKV3 1341 aaKnown RBP16.79■□□□□ 0.28
ERCC8-208ENST00000497892 IQGAP1P46940 1657 aa16.78■□□□□ 0.28
ERCC8-208ENST00000497892 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
ERCC8-208ENST00000497892 SCAF11Q99590 1463 aaKnown RBP16.78■□□□□ 0.28
ERCC8-208ENST00000497892 TMEM2Q9UHN6 1383 aa16.77■□□□□ 0.28
ERCC8-208ENST00000497892 ANKLE2Q86XL3 938 aa16.77■□□□□ 0.28
ERCC8-208ENST00000497892 FXR2P51116 673 aaKnown RBP eCLIP16.76■□□□□ 0.27
ERCC8-208ENST00000497892 STAG3Q9UJ98 1225 aa16.76■□□□□ 0.27
ERCC8-208ENST00000497892 NPHP4O75161 1426 aaPredicted RBP16.76■□□□□ 0.27
ERCC8-208ENST00000497892 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
ERCC8-208ENST00000497892 KIF1BO60333 1816 aa16.73■□□□□ 0.27
ERCC8-208ENST00000497892 LTBP4Q8N2S1 1624 aa16.72■□□□□ 0.27
ERCC8-208ENST00000497892 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
ERCC8-208ENST00000497892 LTKP29376 864 aa16.71■□□□□ 0.27
ERCC8-208ENST00000497892 HRCP23327 699 aa16.7■□□□□ 0.26
ERCC8-208ENST00000497892 EID1Q9Y6B2 187 aa16.7■□□□□ 0.26
ERCC8-208ENST00000497892 TXNDC2Q86VQ3 553 aa16.69■□□□□ 0.26
ERCC8-208ENST00000497892 SPDYE1Q8NFV5 336 aaPredicted RBP16.69■□□□□ 0.26
ERCC8-208ENST00000497892 RIMS2Q9UQ26 1411 aa16.69■□□□□ 0.26
ERCC8-208ENST00000497892 CHGAP10645 457 aaKnown RBP16.67■□□□□ 0.26
ERCC8-208ENST00000497892 ZNF335Q9H4Z2 1342 aaPredicted RBP16.66■□□□□ 0.26
ERCC8-208ENST00000497892 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
ERCC8-208ENST00000497892 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
ERCC8-208ENST00000497892 PLEKHG1Q9ULL1 1385 aa16.64■□□□□ 0.26
ERCC8-208ENST00000497892 CPS1P31327 1500 aa16.63■□□□□ 0.25
ERCC8-208ENST00000497892 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
ERCC8-208ENST00000497892 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
ERCC8-208ENST00000497892 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.62■□□□□ 0.25
ERCC8-208ENST00000497892 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
ERCC8-208ENST00000497892 IQSEC2Q5JU85 1478 aa16.61■□□□□ 0.25
ERCC8-208ENST00000497892 DIP2AQ14689 1571 aa16.61■□□□□ 0.25
ERCC8-208ENST00000497892 CERKQ8TCT0 537 aa16.61■□□□□ 0.25
ERCC8-208ENST00000497892 PPLO60437 1756 aa16.61■□□□□ 0.25
ERCC8-208ENST00000497892 NRXN3Q9Y4C0 1643 aa16.6■□□□□ 0.25
ERCC8-208ENST00000497892 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
ERCC8-208ENST00000497892 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
ERCC8-208ENST00000497892 SPATA31E1Q6ZUB1 1445 aa16.6■□□□□ 0.25
ERCC8-208ENST00000497892 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
ERCC8-208ENST00000497892 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
ERCC8-208ENST00000497892 NWD1Q149M9 1564 aa16.59■□□□□ 0.25
ERCC8-208ENST00000497892 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.24
ERCC8-208ENST00000497892 ADAMTS13Q76LX8 1427 aa16.57■□□□□ 0.24
ERCC8-208ENST00000497892 ANKRD30BQ9BXX2 1392 aa16.57■□□□□ 0.24
ERCC8-208ENST00000497892 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
ERCC8-208ENST00000497892 SLC26A8Q96RN1 970 aa16.56■□□□□ 0.24
ERCC8-208ENST00000497892 CHD2O14647 1828 aaKnown RBP16.55■□□□□ 0.24
ERCC8-208ENST00000497892 RPGRIP1LQ68CZ1 1315 aa16.54■□□□□ 0.24
ERCC8-208ENST00000497892 LRRC7Q96NW7 1537 aa16.54■□□□□ 0.24
ERCC8-208ENST00000497892 NKTRP30414 1462 aaKnown RBP16.54■□□□□ 0.24
ERCC8-208ENST00000497892 BCANQ96GW7 911 aa16.53■□□□□ 0.24
ERCC8-208ENST00000497892 SETD1AO15047 1707 aaKnown RBP16.53■□□□□ 0.24
ERCC8-208ENST00000497892 TBX22Q9Y458 520 aa16.52■□□□□ 0.24
ERCC8-208ENST00000497892 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.23
ERCC8-208ENST00000497892 PIK3R4Q99570 1358 aa16.51■□□□□ 0.23
ERCC8-208ENST00000497892 FBXO41Q8TF61 875 aa16.5■□□□□ 0.23
ERCC8-208ENST00000497892 XRN1Q8IZH2 1706 aaKnown RBP16.5■□□□□ 0.23
ERCC8-208ENST00000497892 VGFO15240 615 aaPredicted RBP16.49■□□□□ 0.23
ERCC8-208ENST00000497892 KCNA6P17658 529 aa16.49■□□□□ 0.23
ERCC8-208ENST00000497892 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
ERCC8-208ENST00000497892 MYOM2P54296 1465 aa16.48■□□□□ 0.23
ERCC8-208ENST00000497892 HAX1O00165 279 aa16.47■□□□□ 0.23
ERCC8-208ENST00000497892 PRKAR2AP13861 404 aaKnown RBP16.47■□□□□ 0.23
ERCC8-208ENST00000497892 RGL3Q3MIN7 710 aa16.47■□□□□ 0.23
ERCC8-208ENST00000497892 ALKQ9UM73 1620 aa16.47■□□□□ 0.23
ERCC8-208ENST00000497892 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
ERCC8-208ENST00000497892 NRXN1Q9ULB1 1477 aa16.46■□□□□ 0.23
ERCC8-208ENST00000497892 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
ERCC8-208ENST00000497892 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
ERCC8-208ENST00000497892 METP08581 1390 aa16.45■□□□□ 0.22
ERCC8-208ENST00000497892 LAMC1P11047 1609 aa16.45■□□□□ 0.22
ERCC8-208ENST00000497892 TMEM94Q12767 1356 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms