RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 AGLP35573 1532 aa15.88■□□□□ 0.13
SNRNP200-208ENST00000497539 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
SNRNP200-208ENST00000497539 NOS1P29475 1434 aa15.87■□□□□ 0.13
SNRNP200-208ENST00000497539 PPLO60437 1756 aa15.87■□□□□ 0.13
SNRNP200-208ENST00000497539 NEFLP07196 543 aa15.87■□□□□ 0.13
SNRNP200-208ENST00000497539 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
SNRNP200-208ENST00000497539 SIGLEC1Q9BZZ2 1709 aa15.87■□□□□ 0.13
SNRNP200-208ENST00000497539 UGGT1Q9NYU2 1555 aa15.86■□□□□ 0.13
SNRNP200-208ENST00000497539 SETBP1Q9Y6X0 1596 aa15.85■□□□□ 0.13
SNRNP200-208ENST00000497539 PRKRIP1Q9H875 184 aaPredicted RBP15.85■□□□□ 0.13
SNRNP200-208ENST00000497539 KTN1Q86UP2 1357 aaKnown RBP15.85■□□□□ 0.13
SNRNP200-208ENST00000497539 MYO3AQ8NEV4 1616 aa15.85■□□□□ 0.13
SNRNP200-208ENST00000497539 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
SNRNP200-208ENST00000497539 RGL3Q3MIN7 710 aa15.84■□□□□ 0.13
SNRNP200-208ENST00000497539 MYT1LQ9UL68 1186 aa15.84■□□□□ 0.13
SNRNP200-208ENST00000497539 SCAF11Q99590 1463 aaKnown RBP15.84■□□□□ 0.13
SNRNP200-208ENST00000497539 SYNMO15061 1565 aa15.84■□□□□ 0.13
SNRNP200-208ENST00000497539 YEATS2Q9ULM3 1422 aa15.83■□□□□ 0.12
SNRNP200-208ENST00000497539 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
SNRNP200-208ENST00000497539 NBPF1Q3BBV0 1214 aa15.81■□□□□ 0.12
SNRNP200-208ENST00000497539 RAPGEF3O95398 923 aa15.81■□□□□ 0.12
SNRNP200-208ENST00000497539 TESK2Q96S53 571 aa15.81■□□□□ 0.12
SNRNP200-208ENST00000497539 PREX1Q8TCU6 1659 aa15.8■□□□□ 0.12
SNRNP200-208ENST00000497539 ARHGEF40Q8TER5 1519 aa15.79■□□□□ 0.12
SNRNP200-208ENST00000497539 IRX6P78412 446 aaPredicted RBP15.79■□□□□ 0.12
SNRNP200-208ENST00000497539 TSPOAP1O95153 1857 aa15.78■□□□□ 0.12
SNRNP200-208ENST00000497539 RPGRIP1LQ68CZ1 1315 aa15.78■□□□□ 0.12
SNRNP200-208ENST00000497539 FAM69CQ0P6D2 419 aa15.78■□□□□ 0.12
SNRNP200-208ENST00000497539 PIK3C2GO75747 1445 aa15.76■□□□□ 0.11
SNRNP200-208ENST00000497539 EIF3AQ14152 1382 aaKnown RBP15.76■□□□□ 0.11
SNRNP200-208ENST00000497539 PPP6R1Q9UPN7 881 aa15.76■□□□□ 0.11
SNRNP200-208ENST00000497539 NEXMIFQ5QGS0 1516 aa15.75■□□□□ 0.11
SNRNP200-208ENST00000497539 DISP3Q9P2K9 1392 aa15.75■□□□□ 0.11
SNRNP200-208ENST00000497539 WASHC2CQ9Y4E1 1318 aa15.75■□□□□ 0.11
SNRNP200-208ENST00000497539 ZFYVE9O95405 1425 aa15.74■□□□□ 0.11
SNRNP200-208ENST00000497539 MYOM1P52179 1685 aa15.74■□□□□ 0.11
SNRNP200-208ENST00000497539 ADGRB1O14514 1584 aa15.73■□□□□ 0.11
SNRNP200-208ENST00000497539 SBNO2Q9Y2G9 1366 aa15.73■□□□□ 0.11
SNRNP200-208ENST00000497539 KDM5AP29375 1690 aaKnown RBP15.72■□□□□ 0.11
SNRNP200-208ENST00000497539 MSH5O43196 834 aa15.72■□□□□ 0.11
SNRNP200-208ENST00000497539 TMEM131LA2VDJ0 1609 aa15.72■□□□□ 0.11
SNRNP200-208ENST00000497539 TMF1P82094 1093 aa15.71■□□□□ 0.11
SNRNP200-208ENST00000497539 GGT6Q6P531 493 aa15.71■□□□□ 0.11
SNRNP200-208ENST00000497539 PARD3Q8TEW0 1356 aa15.7■□□□□ 0.1
SNRNP200-208ENST00000497539 RALBP1Q15311 655 aa15.7■□□□□ 0.1
SNRNP200-208ENST00000497539 SPATA31D1Q6ZQQ2 1576 aa15.7■□□□□ 0.1
SNRNP200-208ENST00000497539 HNRNPUQ00839 825 aaKnown RBP eCLIP15.7■□□□□ 0.1
SNRNP200-208ENST00000497539 ERVK-7P63135 1459 aa15.69■□□□□ 0.1
SNRNP200-208ENST00000497539 ADGRF5Q8IZF2 1346 aa15.69■□□□□ 0.1
SNRNP200-208ENST00000497539 BRD4O60885 1362 aaPredicted RBP15.68■□□□□ 0.1
SNRNP200-208ENST00000497539 PER1O15534 1290 aaPredicted RBP15.68■□□□□ 0.1
SNRNP200-208ENST00000497539 CCDC184Q52MB2 194 aa15.68■□□□□ 0.1
SNRNP200-208ENST00000497539 CLTCQ00610 1675 aaKnown RBP15.67■□□□□ 0.1
SNRNP200-208ENST00000497539 CDCA8Q53HL2 280 aa15.67■□□□□ 0.1
SNRNP200-208ENST00000497539 SLC52A1Q9NWF4 448 aa15.67■□□□□ 0.1
SNRNP200-208ENST00000497539 INSRP06213 1382 aa15.66■□□□□ 0.1
SNRNP200-208ENST00000497539 CFAP65Q6ZU64 1925 aaKnown RBP15.66■□□□□ 0.1
SNRNP200-208ENST00000497539 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
SNRNP200-208ENST00000497539 MYO5BQ9ULV0 1848 aa15.65■□□□□ 0.1
SNRNP200-208ENST00000497539 MYBBP1AQ9BQG0 1328 aaKnown RBP15.65■□□□□ 0.1
SNRNP200-208ENST00000497539 C14orf93Q9H972 538 aaKnown RBP15.65■□□□□ 0.1
SNRNP200-208ENST00000497539 QRICH2Q9H0J4 1663 aa15.65■□□□□ 0.1
SNRNP200-208ENST00000497539 CCDC136Q96JN2 1154 aa15.64■□□□□ 0.09
SNRNP200-208ENST00000497539 ARHGEF28Q8N1W1 1705 aaKnown RBP15.64■□□□□ 0.09
SNRNP200-208ENST00000497539 LRPPRCP42704 1394 aaKnown RBP15.64■□□□□ 0.09
SNRNP200-208ENST00000497539 NPC1L1Q9UHC9 1359 aa15.64■□□□□ 0.09
SNRNP200-208ENST00000497539 ZBED9Q6R2W3 1325 aa15.63■□□□□ 0.09
SNRNP200-208ENST00000497539 CFAP70Q5T0N1 1121 aa15.62■□□□□ 0.09
SNRNP200-208ENST00000497539 POLR3GLQ9BT43 218 aa15.61■□□□□ 0.09
SNRNP200-208ENST00000497539 USP32Q8NFA0 1604 aa15.59■□□□□ 0.09
SNRNP200-208ENST00000497539 ASXL1Q8IXJ9 1541 aa15.59■□□□□ 0.09
SNRNP200-208ENST00000497539 VGFO15240 615 aaPredicted RBP15.59■□□□□ 0.09
SNRNP200-208ENST00000497539 PNISRQ8TF01 805 aaKnown RBP15.58■□□□□ 0.08
SNRNP200-208ENST00000497539 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
SNRNP200-208ENST00000497539 IDI1Q13907 227 aa15.57■□□□□ 0.08
SNRNP200-208ENST00000497539 PUS7Q96PZ0 661 aaKnown RBP15.57■□□□□ 0.08
SNRNP200-208ENST00000497539 NLRP13Q86W25 1043 aa15.57■□□□□ 0.08
SNRNP200-208ENST00000497539 PANK3Q9H999 370 aa15.56■□□□□ 0.08
SNRNP200-208ENST00000497539 SETD1AO15047 1707 aaKnown RBP15.56■□□□□ 0.08
SNRNP200-208ENST00000497539 CENPJQ9HC77 1338 aaPredicted RBP15.54■□□□□ 0.08
SNRNP200-208ENST00000497539 A2ML1A8K2U0 1454 aa15.54■□□□□ 0.08
SNRNP200-208ENST00000497539 DLC1Q96QB1 1528 aa15.53■□□□□ 0.08
SNRNP200-208ENST00000497539 CHGAP10645 457 aaKnown RBP15.52■□□□□ 0.08
SNRNP200-208ENST00000497539 FAM9BQ8IZU0 186 aa15.52■□□□□ 0.08
SNRNP200-208ENST00000497539 ALKQ9UM73 1620 aa15.52■□□□□ 0.08
SNRNP200-208ENST00000497539 BLMP54132 1417 aaPredicted RBP15.51■□□□□ 0.07
SNRNP200-208ENST00000497539 TULP4Q9NRJ4 1543 aa15.51■□□□□ 0.07
SNRNP200-208ENST00000497539 SMG6Q86US8 1419 aaKnown RBP15.51■□□□□ 0.07
SNRNP200-208ENST00000497539 AMER1Q5JTC6 1135 aaPredicted RBP15.51■□□□□ 0.07
SNRNP200-208ENST00000497539 TMC1Q8TDI8 760 aa15.51■□□□□ 0.07
SNRNP200-208ENST00000497539 DEKP35659 375 aaKnown RBP15.51■□□□□ 0.07
SNRNP200-208ENST00000497539 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
SNRNP200-208ENST00000497539 PTPRMP28827 1452 aa15.5■□□□□ 0.07
SNRNP200-208ENST00000497539 FANCIQ9NVI1 1328 aa15.5■□□□□ 0.07
SNRNP200-208ENST00000497539 CNGB1Q14028 1251 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-208ENST00000497539 NRXN3Q9Y4C0 1643 aa15.49■□□□□ 0.07
SNRNP200-208ENST00000497539 KNDC1Q76NI1 1749 aa15.48■□□□□ 0.07
SNRNP200-208ENST00000497539 FBXO31Q5XUX0 539 aaPredicted RBP15.47■□□□□ 0.07
SNRNP200-208ENST00000497539 KNSTRNQ9Y448 316 aa15.47■□□□□ 0.07
SNRNP200-208ENST00000497539 UBR1Q8IWV7 1749 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms