RNA–Protein interactions for RNA: ENST00000497073.1

TMC1-206, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-206ENST00000497073 CCDC141Q6ZP82 1450 aa11.51□□□□□ -0.57
TMC1-206ENST00000497073 ATP7AQ04656 1500 aa11.5□□□□□ -0.57
TMC1-206ENST00000497073 PDCD7Q8N8D1 485 aaKnown RBP11.5□□□□□ -0.57
TMC1-206ENST00000497073 MYOM3Q5VTT5 1437 aa11.5□□□□□ -0.57
TMC1-206ENST00000497073 CAMSAP2Q08AD1 1489 aa11.5□□□□□ -0.57
TMC1-206ENST00000497073 CEBPAP49715 358 aaPredicted RBP11.49□□□□□ -0.57
TMC1-206ENST00000497073 DHX29Q7Z478 1369 aaKnown RBP11.49□□□□□ -0.57
TMC1-206ENST00000497073 ABCA6Q8N139 1617 aa11.48□□□□□ -0.57
TMC1-206ENST00000497073 RIMS1Q86UR5 1692 aaKnown RBP11.48□□□□□ -0.57
TMC1-206ENST00000497073 KIDINS220Q9ULH0 1771 aa11.48□□□□□ -0.57
TMC1-206ENST00000497073 KIF3BO15066 747 aa11.47□□□□□ -0.57
TMC1-206ENST00000497073 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
TMC1-206ENST00000497073 PROM2Q8N271 834 aa11.47□□□□□ -0.57
TMC1-206ENST00000497073 MIER1Q8N108 512 aa11.46□□□□□ -0.57
TMC1-206ENST00000497073 ZMYM3Q14202 1370 aa11.45□□□□□ -0.58
TMC1-206ENST00000497073 INO80Q9ULG1 1556 aaPredicted RBP11.45□□□□□ -0.58
TMC1-206ENST00000497073 UHRF1BP1Q6BDS2 1440 aa11.44□□□□□ -0.58
TMC1-206ENST00000497073 FER1L4A9Z1Z3 1794 aa11.44□□□□□ -0.58
TMC1-206ENST00000497073 HOXB3P14651 431 aaPredicted RBP11.44□□□□□ -0.58
TMC1-206ENST00000497073 ARHGEF5Q12774 1597 aa11.44□□□□□ -0.58
TMC1-206ENST00000497073 SIGLEC1Q9BZZ2 1709 aa11.43□□□□□ -0.58
TMC1-206ENST00000497073 WASHC2CQ9Y4E1 1318 aa11.43□□□□□ -0.58
TMC1-206ENST00000497073 HSPA2P54652 639 aa11.43□□□□□ -0.58
TMC1-206ENST00000497073 LMTK3Q96Q04 1460 aa11.43□□□□□ -0.58
TMC1-206ENST00000497073 ERBB3P21860 1342 aa11.42□□□□□ -0.58
TMC1-206ENST00000497073 L3MBTL3Q96JM7 780 aaPredicted RBP11.42□□□□□ -0.58
TMC1-206ENST00000497073 ADGBQ8N7X0 1667 aa11.41□□□□□ -0.58
TMC1-206ENST00000497073 HOXB1P14653 301 aaPredicted RBP11.41□□□□□ -0.58
TMC1-206ENST00000497073 NUBP1P53384 320 aa11.41□□□□□ -0.58
TMC1-206ENST00000497073 FAM50AQ14320 339 aaKnown RBP11.41□□□□□ -0.58
TMC1-206ENST00000497073 NPATQ14207 1427 aa11.41□□□□□ -0.58
TMC1-206ENST00000497073 PLXNC1O60486 1568 aa11.41□□□□□ -0.58
TMC1-206ENST00000497073 FGD6Q6ZV73 1430 aa11.4□□□□□ -0.58
TMC1-206ENST00000497073 RRP7BPQ9NSQ0 103 aa11.39□□□□□ -0.59
TMC1-206ENST00000497073 ANKRD30AQ9BXX3 1397 aa11.38□□□□□ -0.59
TMC1-206ENST00000497073 ABCC5O15440 1437 aa11.37□□□□□ -0.59
TMC1-206ENST00000497073 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
TMC1-206ENST00000497073 MAST1Q9Y2H9 1570 aa11.37□□□□□ -0.59
TMC1-206ENST00000497073 DAPK1P53355 1430 aa11.36□□□□□ -0.59
TMC1-206ENST00000497073 FAM135AQ9P2D6 1515 aa11.36□□□□□ -0.59
TMC1-206ENST00000497073 PTPN23Q9H3S7 1636 aa11.36□□□□□ -0.59
TMC1-206ENST00000497073 CHIC2Q9UKJ5 165 aa11.36□□□□□ -0.59
TMC1-206ENST00000497073 KIF15Q9NS87 1388 aa11.36□□□□□ -0.59
TMC1-206ENST00000497073 TCOF1Q13428 1488 aaKnown RBP11.36□□□□□ -0.59
TMC1-206ENST00000497073 SHANK2Q9UPX8 1470 aa11.36□□□□□ -0.59
TMC1-206ENST00000497073 KANK1Q14678 1352 aa11.35□□□□□ -0.59
TMC1-206ENST00000497073 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
TMC1-206ENST00000497073 MROH2AA6NES4 1674 aa11.34□□□□□ -0.59
TMC1-206ENST00000497073 PREX1Q8TCU6 1659 aa11.34□□□□□ -0.59
TMC1-206ENST00000497073 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
TMC1-206ENST00000497073 C3P01024 1663 aa11.33□□□□□ -0.6
TMC1-206ENST00000497073 PTGER2P43116 358 aa11.33□□□□□ -0.6
TMC1-206ENST00000497073 PKD2Q13563 968 aa11.33□□□□□ -0.6
TMC1-206ENST00000497073 VARS2Q5ST30 1063 aaKnown RBP11.33□□□□□ -0.6
TMC1-206ENST00000497073 KDM5DQ9BY66 1539 aa11.33□□□□□ -0.6
TMC1-206ENST00000497073 ERBINQ96RT1 1412 aa11.33□□□□□ -0.6
TMC1-206ENST00000497073 SETD1BQ9UPS6 1966 aaKnown RBP11.32□□□□□ -0.6
TMC1-206ENST00000497073 THEMISQ8N1K5 641 aaPredicted RBP11.32□□□□□ -0.6
TMC1-206ENST00000497073 TNRQ92752 1358 aa11.31□□□□□ -0.6
TMC1-206ENST00000497073 CLTCQ00610 1675 aaKnown RBP11.31□□□□□ -0.6
TMC1-206ENST00000497073 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
TMC1-206ENST00000497073 NCOA1Q15788 1441 aa11.31□□□□□ -0.6
TMC1-206ENST00000497073 PPARGC1BQ86YN6 1023 aaKnown RBP11.3□□□□□ -0.6
TMC1-206ENST00000497073 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
TMC1-206ENST00000497073 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
TMC1-206ENST00000497073 PZPP20742 1482 aa11.3□□□□□ -0.6
TMC1-206ENST00000497073 DNMT1P26358 1616 aaKnown RBP11.29□□□□□ -0.6
TMC1-206ENST00000497073 EIF2AK4Q9P2K8 1649 aaKnown RBP11.29□□□□□ -0.6
TMC1-206ENST00000497073 FBXO41Q8TF61 875 aa11.29□□□□□ -0.6
TMC1-206ENST00000497073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
TMC1-206ENST00000497073 PTPRTO14522 1441 aa11.28□□□□□ -0.6
TMC1-206ENST00000497073 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
TMC1-206ENST00000497073 PCDHB8Q9UN66 801 aa11.28□□□□□ -0.6
TMC1-206ENST00000497073 ITGAEP38570 1179 aa11.27□□□□□ -0.61
TMC1-206ENST00000497073 ANKLE2Q86XL3 938 aa11.27□□□□□ -0.61
TMC1-206ENST00000497073 ZNF687Q8N1G0 1237 aa11.27□□□□□ -0.61
TMC1-206ENST00000497073 CERKQ8TCT0 537 aa11.27□□□□□ -0.61
TMC1-206ENST00000497073 A2ML1A8K2U0 1454 aa11.26□□□□□ -0.61
TMC1-206ENST00000497073 NLRP1Q9C000 1473 aa11.26□□□□□ -0.61
TMC1-206ENST00000497073 NCKAP5LQ9HCH0 1330 aa11.26□□□□□ -0.61
TMC1-206ENST00000497073 ROCK1Q13464 1354 aa11.26□□□□□ -0.61
TMC1-206ENST00000497073 ANKRD50Q9ULJ7 1429 aa11.26□□□□□ -0.61
TMC1-206ENST00000497073 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
TMC1-206ENST00000497073 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
TMC1-206ENST00000497073 ABCC3O15438 1527 aa11.25□□□□□ -0.61
TMC1-206ENST00000497073 RNF17Q9BXT8 1623 aaKnown RBP11.25□□□□□ -0.61
TMC1-206ENST00000497073 ARHGAP31Q2M1Z3 1444 aa11.25□□□□□ -0.61
TMC1-206ENST00000497073 CEP170BQ9Y4F5 1589 aaPredicted RBP11.24□□□□□ -0.61
TMC1-206ENST00000497073 CAMSAP1Q5T5Y3 1602 aa11.24□□□□□ -0.61
TMC1-206ENST00000497073 CROCC2H7BZ55 1655 aa11.24□□□□□ -0.61
TMC1-206ENST00000497073 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
TMC1-206ENST00000497073 PCGF6Q9BYE7 350 aa11.23□□□□□ -0.61
TMC1-206ENST00000497073 ZEB1P37275 1124 aaPredicted RBP11.22□□□□□ -0.61
TMC1-206ENST00000497073 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
TMC1-206ENST00000497073 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
TMC1-206ENST00000497073 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
TMC1-206ENST00000497073 MYO3AQ8NEV4 1616 aa11.22□□□□□ -0.61
TMC1-206ENST00000497073 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
TMC1-206ENST00000497073 EID1Q9Y6B2 187 aa11.22□□□□□ -0.61
TMC1-206ENST00000497073 PRDM15P57071 1507 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms