RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
PALMD-202ENST00000496843 SEPT7Q16181 437 aaKnown RBP6.61□□□□□ -1.35
PALMD-202ENST00000496843 PPFIBP2Q8ND30 876 aa6.61□□□□□ -1.35
PALMD-202ENST00000496843 RABEP1Q15276 862 aa6.61□□□□□ -1.35
PALMD-202ENST00000496843 PMFBP1Q8TBY8 1022 aa6.61□□□□□ -1.35
PALMD-202ENST00000496843 KNSTRNQ9Y448 316 aa6.61□□□□□ -1.35
PALMD-202ENST00000496843 ATP6V1DQ9Y5K8 247 aa6.61□□□□□ -1.35
PALMD-202ENST00000496843 POLR3GO15318 223 aaPredicted RBP6.6□□□□□ -1.35
PALMD-202ENST00000496843 LRCH2Q5VUJ6 765 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 SLMAPQ14BN4 828 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 DBN1Q16643 649 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 SLC26A8Q96RN1 970 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 CEP83Q9Y592 693 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 AP1ARQ63HQ0 302 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 LUZP1Q86V48 1076 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 CNPY4Q8N129 248 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 CCDC112Q8NEF3 446 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 ANKRD20A12PQ8NF67 263 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 RBM33Q96EV2 1170 aaKnown RBP6.6□□□□□ -1.35
PALMD-202ENST00000496843 TOMM22Q9NS69 142 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 A0A1B0GUA9 196 aa6.6□□□□□ -1.35
PALMD-202ENST00000496843 RFC1P35251 1148 aaPredicted RBP6.59□□□□□ -1.35
PALMD-202ENST00000496843 SMC1AQ14683 1233 aaKnown RBP6.59□□□□□ -1.35
PALMD-202ENST00000496843 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.59□□□□□ -1.35
PALMD-202ENST00000496843 NASPP49321 788 aaPredicted RBP6.59□□□□□ -1.35
PALMD-202ENST00000496843 BMS1Q14692 1282 aaKnown RBP6.59□□□□□ -1.35
PALMD-202ENST00000496843 SF3A1Q15459 793 aaKnown RBP6.59□□□□□ -1.35
PALMD-202ENST00000496843 ZFYP08048 801 aaPredicted RBP6.59□□□□□ -1.35
PALMD-202ENST00000496843 NUCB2P80303 420 aa6.59□□□□□ -1.35
PALMD-202ENST00000496843 FEZ2Q9UHY8 353 aaPredicted RBP6.59□□□□□ -1.35
PALMD-202ENST00000496843 ERLIN2O94905 339 aa6.59□□□□□ -1.36
PALMD-202ENST00000496843 C10orf67Q8IYJ2 551 aa6.59□□□□□ -1.36
PALMD-202ENST00000496843 MAP3K7CLP57077 242 aa6.58□□□□□ -1.36
PALMD-202ENST00000496843 KIF3BO15066 747 aa6.58□□□□□ -1.36
PALMD-202ENST00000496843 SOGA3Q5TF21 947 aa6.58□□□□□ -1.36
PALMD-202ENST00000496843 GTF2F1P35269 517 aaKnown RBP eCLIP6.58□□□□□ -1.36
PALMD-202ENST00000496843 FRAT1Q92837 279 aaPredicted RBP6.58□□□□□ -1.36
PALMD-202ENST00000496843 LRRCC1Q9C099 1032 aa6.58□□□□□ -1.36
PALMD-202ENST00000496843 CFAP45Q9UL16 551 aa6.58□□□□□ -1.36
PALMD-202ENST00000496843 ANKRD62A6NC57 917 aa6.58□□□□□ -1.36
PALMD-202ENST00000496843 HSPA5P11021 654 aaKnown RBP6.58□□□□□ -1.36
PALMD-202ENST00000496843 SMARCE1Q969G3 411 aa6.58□□□□□ -1.36
PALMD-202ENST00000496843 NAP1L3Q99457 506 aaPredicted RBP6.58□□□□□ -1.36
PALMD-202ENST00000496843 NPHP1O15259 732 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 SRPK2P78362 688 aaKnown RBP6.57□□□□□ -1.36
PALMD-202ENST00000496843 TMCO3Q6UWJ1 677 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 ZC4H2Q9NQZ6 224 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 GORABQ5T7V8 394 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 GBP6Q6ZN66 633 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 ITPRIPQ8IWB1 547 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 PIK3R5Q8WYR1 880 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 CCDC102AQ96A19 550 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.57□□□□□ -1.36
PALMD-202ENST00000496843 V9GYY5 206 aaPredicted RBP6.57□□□□□ -1.36
PALMD-202ENST00000496843 ST18O60284 1047 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 UIMC1Q96RL1 719 aa6.57□□□□□ -1.36
PALMD-202ENST00000496843 AKAP17AQ02040 695 aaKnown RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 ODF2Q5BJF6 829 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 RNF187Q5TA31 235 aaPredicted RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 RNF214Q8ND24 703 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 GTPBP4Q9BZE4 634 aaKnown RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 MAP2K1Q02750 393 aaPredicted RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 TTC31Q49AM3 519 aaPredicted RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 SEPT8Q92599 483 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 PCMTD1Q96MG8 357 aaPredicted RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 SEPT10Q9P0V9 454 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 DDX46Q7L014 1031 aaKnown RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 TAX1BP1Q86VP1 789 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 MYCBPQ99417 103 aaPredicted RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 CCDC160A6NGH7 325 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 VGLL3A8MV65 326 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 MFAP1P55081 439 aaKnown RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 NOL8Q76FK4 1167 aaKnown RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 FMNL3Q8IVF7 1028 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 MAP2K2P36507 400 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 TRIM29Q14134 588 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 FOXD4L1Q9NU39 408 aa6.56□□□□□ -1.36
PALMD-202ENST00000496843 HOOK1Q9UJC3 728 aaKnown RBP6.56□□□□□ -1.36
PALMD-202ENST00000496843 CCDC6Q16204 474 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 NBPF1Q3BBV0 1214 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 RSRC1Q96IZ7 334 aaKnown RBP6.55□□□□□ -1.36
PALMD-202ENST00000496843 ESPNB1AK53 854 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 STAMBPO95630 424 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 SYCP1Q15431 976 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 DDX23Q9BUQ8 820 aaKnown RBP6.55□□□□□ -1.36
PALMD-202ENST00000496843 SATB2Q9UPW6 733 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 HSP90AB2PQ58FF8 381 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 TXLNBQ8N3L3 684 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.55□□□□□ -1.36
PALMD-202ENST00000496843 FLIIQ13045 1269 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 GBP3Q9H0R5 595 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 CHMP5Q9NZZ3 219 aa6.55□□□□□ -1.36
PALMD-202ENST00000496843 KIF5BP33176 963 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 DHX8Q14562 1220 aaKnown RBP6.54□□□□□ -1.36
PALMD-202ENST00000496843 NAA25Q14CX7 972 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 PDCD7Q8N8D1 485 aaKnown RBP6.54□□□□□ -1.36
PALMD-202ENST00000496843 RASSF4Q9H2L5 321 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 OFD1O75665 1012 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 RNF8O76064 485 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 NPM1P06748 294 aaKnown RBP eCLIP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms