RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 CHMP3Q9Y3E7 222 aa9.92□□□□□ -0.82
NPHP1-211ENST00000496524 ENOX2Q16206 610 aaKnown RBP9.91□□□□□ -0.82
NPHP1-211ENST00000496524 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
NPHP1-211ENST00000496524 SAFBQ15424 915 aaKnown RBP eCLIP9.91□□□□□ -0.82
NPHP1-211ENST00000496524 MBD3O95983 291 aa9.91□□□□□ -0.82
NPHP1-211ENST00000496524 SLC26A8Q96RN1 970 aa9.91□□□□□ -0.82
NPHP1-211ENST00000496524 CALCOCO1Q9P1Z2 691 aa9.91□□□□□ -0.82
NPHP1-211ENST00000496524 GOLGA3Q08378 1498 aa9.91□□□□□ -0.82
NPHP1-211ENST00000496524 GOLGA6L10A0A0M3HER8 536 aa9.9□□□□□ -0.82
NPHP1-211ENST00000496524 GBP2P32456 591 aaPredicted RBP9.9□□□□□ -0.82
NPHP1-211ENST00000496524 CNKSR2Q8WXI2 1034 aa9.9□□□□□ -0.82
NPHP1-211ENST00000496524 KANK1Q14678 1352 aa9.9□□□□□ -0.82
NPHP1-211ENST00000496524 FOXD4L5Q5VV16 416 aaPredicted RBP9.9□□□□□ -0.82
NPHP1-211ENST00000496524 FOXD4L4Q8WXT5 416 aaPredicted RBP9.9□□□□□ -0.82
NPHP1-211ENST00000496524 CPLX1O14810 134 aa9.9□□□□□ -0.82
NPHP1-211ENST00000496524 SEPT11Q9NVA2 429 aaKnown RBP9.9□□□□□ -0.82
NPHP1-211ENST00000496524 NF2P35240 595 aa9.9□□□□□ -0.82
NPHP1-211ENST00000496524 SRPK2P78362 688 aaKnown RBP9.9□□□□□ -0.83
NPHP1-211ENST00000496524 CCDC43Q96MW1 224 aaKnown RBP9.9□□□□□ -0.83
NPHP1-211ENST00000496524 CFAP57Q96MR6 1250 aa9.89□□□□□ -0.83
NPHP1-211ENST00000496524 TRDNQ13061 729 aa9.89□□□□□ -0.83
NPHP1-211ENST00000496524 ZFYVE27Q5T4F4 411 aa9.89□□□□□ -0.83
NPHP1-211ENST00000496524 FEZ1Q99689 392 aa9.89□□□□□ -0.83
NPHP1-211ENST00000496524 FRAT2O75474 233 aaPredicted RBP9.89□□□□□ -0.83
NPHP1-211ENST00000496524 U2AF1L5P0DN76 240 aaPredicted RBP9.88□□□□□ -0.83
NPHP1-211ENST00000496524 U2AF1Q01081 240 aaKnown RBP eCLIP9.88□□□□□ -0.83
NPHP1-211ENST00000496524 SMC3Q9UQE7 1217 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 CCDC146Q8IYE0 955 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 ERICH2A1L162 156 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 RILPL2Q969X0 211 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 AAMPQ13685 434 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 CCDC91Q7Z6B0 441 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 GBP3Q9H0R5 595 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.88□□□□□ -0.83
NPHP1-211ENST00000496524 ZNHIT6Q9NWK9 470 aaKnown RBP9.88□□□□□ -0.83
NPHP1-211ENST00000496524 ROCK2O75116 1388 aaKnown RBP9.88□□□□□ -0.83
NPHP1-211ENST00000496524 XBP1P17861 261 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 LRRCC1Q9C099 1032 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 BRMS1Q9HCU9 246 aa9.88□□□□□ -0.83
NPHP1-211ENST00000496524 CFDP1Q9UEE9 299 aaPredicted RBP9.88□□□□□ -0.83
NPHP1-211ENST00000496524 ROCK1Q13464 1354 aa9.87□□□□□ -0.83
NPHP1-211ENST00000496524 MICALCLQ6ZW33 695 aa9.87□□□□□ -0.83
NPHP1-211ENST00000496524 ZCCHC6Q5VYS8 1495 aaKnown RBP9.87□□□□□ -0.83
NPHP1-211ENST00000496524 POLR3GO15318 223 aaPredicted RBP9.87□□□□□ -0.83
NPHP1-211ENST00000496524 SYCP1Q15431 976 aa9.87□□□□□ -0.83
NPHP1-211ENST00000496524 SHTN1A0MZ66 631 aa9.87□□□□□ -0.83
NPHP1-211ENST00000496524 STAMBPO95630 424 aa9.87□□□□□ -0.83
NPHP1-211ENST00000496524 MCM3P25205 808 aa9.87□□□□□ -0.83
NPHP1-211ENST00000496524 NOL10Q9BSC4 688 aaKnown RBP9.87□□□□□ -0.83
NPHP1-211ENST00000496524 ANKRD62A6NC57 917 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 PDILTQ8N807 584 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 CCDC112Q8NEF3 446 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 TRIM5Q9C035 493 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 TXLNAP40222 546 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 RSPH4AQ5TD94 716 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 ANKRD45Q5TZF3 282 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 CCDC181Q5TID7 509 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 MCM2P49736 904 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 INTS3Q68E01 1043 aaKnown RBP9.86□□□□□ -0.83
NPHP1-211ENST00000496524 DCAF11Q8TEB1 546 aa9.86□□□□□ -0.83
NPHP1-211ENST00000496524 MAGEC2Q9UBF1 373 aaPredicted RBP9.85□□□□□ -0.83
NPHP1-211ENST00000496524 CENPHQ9H3R5 247 aa9.85□□□□□ -0.83
NPHP1-211ENST00000496524 CTDP1Q9Y5B0 961 aaPredicted RBP9.85□□□□□ -0.83
NPHP1-211ENST00000496524 NGEFQ8N5V2 710 aa9.85□□□□□ -0.83
NPHP1-211ENST00000496524 SDF4Q9BRK5 362 aa9.85□□□□□ -0.83
NPHP1-211ENST00000496524 SLC4A10Q6U841 1118 aa9.84□□□□□ -0.83
NPHP1-211ENST00000496524 DACH1Q9UI36 760 aa9.84□□□□□ -0.83
NPHP1-211ENST00000496524 RBM33Q96EV2 1170 aaKnown RBP9.84□□□□□ -0.83
NPHP1-211ENST00000496524 FOXD4L6Q3SYB3 417 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-211ENST00000496524 FOXD4L3Q6VB84 417 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-211ENST00000496524 PDCP20941 246 aa9.84□□□□□ -0.83
NPHP1-211ENST00000496524 MAP2K1Q02750 393 aaPredicted RBP9.84□□□□□ -0.83
NPHP1-211ENST00000496524 KIF3BO15066 747 aa9.84□□□□□ -0.83
NPHP1-211ENST00000496524 TRIM34Q9BYJ4 488 aa9.83□□□□□ -0.84
NPHP1-211ENST00000496524 TSPY26PQ9H489 355 aa9.83□□□□□ -0.84
NPHP1-211ENST00000496524 KIF2AO00139 706 aaPredicted RBP9.83□□□□□ -0.84
NPHP1-211ENST00000496524 KINO60870 393 aaKnown RBP9.83□□□□□ -0.84
NPHP1-211ENST00000496524 MAP9Q49MG5 647 aa9.83□□□□□ -0.84
NPHP1-211ENST00000496524 CEP63Q96MT8 703 aa9.83□□□□□ -0.84
NPHP1-211ENST00000496524 NLRP13Q86W25 1043 aa9.83□□□□□ -0.84
NPHP1-211ENST00000496524 LUZP1Q86V48 1076 aa9.83□□□□□ -0.84
NPHP1-211ENST00000496524 WWC2Q6AWC2 1192 aa9.82□□□□□ -0.84
NPHP1-211ENST00000496524 NFKBIBQ15653 356 aa9.82□□□□□ -0.84
NPHP1-211ENST00000496524 CEP162Q5TB80 1403 aa9.82□□□□□ -0.84
NPHP1-211ENST00000496524 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
NPHP1-211ENST00000496524 TRAK2O60296 914 aa9.82□□□□□ -0.84
NPHP1-211ENST00000496524 ANO2Q9NQ90 1003 aa9.82□□□□□ -0.84
NPHP1-211ENST00000496524 SKIDA1Q1XH10 827 aa9.82□□□□□ -0.84
NPHP1-211ENST00000496524 DDX19BQ9UMR2 479 aa9.82□□□□□ -0.84
NPHP1-211ENST00000496524 CHMP7Q8WUX9 453 aaPredicted RBP9.82□□□□□ -0.84
NPHP1-211ENST00000496524 PDIA4P13667 645 aaKnown RBP9.81□□□□□ -0.84
NPHP1-211ENST00000496524 PSMA5P28066 241 aa9.81□□□□□ -0.84
NPHP1-211ENST00000496524 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.81□□□□□ -0.84
NPHP1-211ENST00000496524 V9GYY5 206 aaPredicted RBP9.81□□□□□ -0.84
NPHP1-211ENST00000496524 CBFA2T2O43439 604 aa9.81□□□□□ -0.84
NPHP1-211ENST00000496524 TTLL5Q6EMB2 1281 aa9.81□□□□□ -0.84
NPHP1-211ENST00000496524 DESP17661 470 aa9.81□□□□□ -0.84
NPHP1-211ENST00000496524 ZKSCAN2Q63HK3 967 aa9.81□□□□□ -0.84
NPHP1-211ENST00000496524 TAX1BP1Q86VP1 789 aa9.81□□□□□ -0.84
NPHP1-211ENST00000496524 E9PSI1 815 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms