RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 SKAP1Q86WV1 359 aa16.43■□□□□ 0.22
PDE6B-212ENST00000496514 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
PDE6B-212ENST00000496514 INO80Q9ULG1 1556 aaPredicted RBP16.42■□□□□ 0.22
PDE6B-212ENST00000496514 PTPRTO14522 1441 aa16.42■□□□□ 0.22
PDE6B-212ENST00000496514 NOS1P29475 1434 aa16.42■□□□□ 0.22
PDE6B-212ENST00000496514 RCAN3Q9UKA8 241 aa16.41■□□□□ 0.22
PDE6B-212ENST00000496514 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
PDE6B-212ENST00000496514 MSH5O43196 834 aa16.41■□□□□ 0.22
PDE6B-212ENST00000496514 STK26Q9P289 416 aa16.41■□□□□ 0.22
PDE6B-212ENST00000496514 EIF2AK4Q9P2K8 1649 aaKnown RBP16.4■□□□□ 0.22
PDE6B-212ENST00000496514 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
PDE6B-212ENST00000496514 SCAF11Q99590 1463 aaKnown RBP16.4■□□□□ 0.22
PDE6B-212ENST00000496514 KIDINS220Q9ULH0 1771 aa16.4■□□□□ 0.22
PDE6B-212ENST00000496514 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
PDE6B-212ENST00000496514 MROH1Q8NDA8 1641 aa16.38■□□□□ 0.21
PDE6B-212ENST00000496514 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
PDE6B-212ENST00000496514 MLECQ14165 292 aa16.38■□□□□ 0.21
PDE6B-212ENST00000496514 SLC12A5Q9H2X9 1139 aa16.38■□□□□ 0.21
PDE6B-212ENST00000496514 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
PDE6B-212ENST00000496514 TET3O43151 1660 aa16.37■□□□□ 0.21
PDE6B-212ENST00000496514 CEP152O94986 1710 aa16.37■□□□□ 0.21
PDE6B-212ENST00000496514 NPATQ14207 1427 aa16.36■□□□□ 0.21
PDE6B-212ENST00000496514 ARAP3Q8WWN8 1544 aa16.36■□□□□ 0.21
PDE6B-212ENST00000496514 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
PDE6B-212ENST00000496514 PPRC1Q5VV67 1664 aaKnown RBP16.35■□□□□ 0.21
PDE6B-212ENST00000496514 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
PDE6B-212ENST00000496514 C20orf194Q5TEA3 1177 aa16.34■□□□□ 0.21
PDE6B-212ENST00000496514 FBXO31Q5XUX0 539 aaPredicted RBP16.34■□□□□ 0.21
PDE6B-212ENST00000496514 POGZQ7Z3K3 1410 aa16.34■□□□□ 0.21
PDE6B-212ENST00000496514 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
PDE6B-212ENST00000496514 MROH2AA6NES4 1674 aa16.33■□□□□ 0.21
PDE6B-212ENST00000496514 CDCA8Q53HL2 280 aa16.33■□□□□ 0.21
PDE6B-212ENST00000496514 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.21
PDE6B-212ENST00000496514 YEATS2Q9ULM3 1422 aa16.32■□□□□ 0.2
PDE6B-212ENST00000496514 EIF3AQ14152 1382 aaKnown RBP16.32■□□□□ 0.2
PDE6B-212ENST00000496514 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
PDE6B-212ENST00000496514 APAF1O14727 1248 aa16.32■□□□□ 0.2
PDE6B-212ENST00000496514 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
PDE6B-212ENST00000496514 PLEKHH1Q9ULM0 1364 aa16.32■□□□□ 0.2
PDE6B-212ENST00000496514 RNF123Q5XPI4 1314 aa16.31■□□□□ 0.2
PDE6B-212ENST00000496514 IDI1Q13907 227 aa16.31■□□□□ 0.2
PDE6B-212ENST00000496514 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
PDE6B-212ENST00000496514 EFCAB6Q5THR3 1501 aa16.31■□□□□ 0.2
PDE6B-212ENST00000496514 ABCA6Q8N139 1617 aa16.31■□□□□ 0.2
PDE6B-212ENST00000496514 VWDEQ8N2E2 1590 aa16.31■□□□□ 0.2
PDE6B-212ENST00000496514 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
PDE6B-212ENST00000496514 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
PDE6B-212ENST00000496514 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
PDE6B-212ENST00000496514 LAMC1P11047 1609 aa16.3■□□□□ 0.2
PDE6B-212ENST00000496514 FRMPD1Q5SYB0 1578 aa16.3■□□□□ 0.2
PDE6B-212ENST00000496514 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
PDE6B-212ENST00000496514 CRBNQ96SW2 442 aa16.3■□□□□ 0.2
PDE6B-212ENST00000496514 ERVK-7P63135 1459 aa16.29■□□□□ 0.2
PDE6B-212ENST00000496514 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
PDE6B-212ENST00000496514 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.2
PDE6B-212ENST00000496514 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
PDE6B-212ENST00000496514 KIF1BO60333 1816 aa16.27■□□□□ 0.19
PDE6B-212ENST00000496514 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
PDE6B-212ENST00000496514 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
PDE6B-212ENST00000496514 C14orf93Q9H972 538 aaKnown RBP16.25■□□□□ 0.19
PDE6B-212ENST00000496514 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
PDE6B-212ENST00000496514 MINK1Q8N4C8 1332 aaPredicted RBP16.25■□□□□ 0.19
PDE6B-212ENST00000496514 ASXL1Q8IXJ9 1541 aa16.25■□□□□ 0.19
PDE6B-212ENST00000496514 BLMP54132 1417 aaPredicted RBP16.24■□□□□ 0.19
PDE6B-212ENST00000496514 NSD3Q9BZ95 1437 aa16.24■□□□□ 0.19
PDE6B-212ENST00000496514 HECW2Q9P2P5 1572 aa16.23■□□□□ 0.19
PDE6B-212ENST00000496514 PLEKHG5O94827 1062 aa16.23■□□□□ 0.19
PDE6B-212ENST00000496514 PDE3BQ13370 1112 aa16.23■□□□□ 0.19
PDE6B-212ENST00000496514 SRPK2P78362 688 aaKnown RBP16.23■□□□□ 0.19
PDE6B-212ENST00000496514 STAC3Q96MF2 364 aa16.22■□□□□ 0.19
PDE6B-212ENST00000496514 MYOM1P52179 1685 aa16.22■□□□□ 0.19
PDE6B-212ENST00000496514 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
PDE6B-212ENST00000496514 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
PDE6B-212ENST00000496514 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
PDE6B-212ENST00000496514 ABCC3O15438 1527 aa16.21■□□□□ 0.19
PDE6B-212ENST00000496514 BCAR3O75815 825 aa16.2■□□□□ 0.18
PDE6B-212ENST00000496514 FBLN1P23142 703 aa16.2■□□□□ 0.18
PDE6B-212ENST00000496514 MYOM2P54296 1465 aa16.2■□□□□ 0.18
PDE6B-212ENST00000496514 SYNMO15061 1565 aa16.19■□□□□ 0.18
PDE6B-212ENST00000496514 KDM5AP29375 1690 aaKnown RBP16.19■□□□□ 0.18
PDE6B-212ENST00000496514 MTHFSP49914 203 aa16.19■□□□□ 0.18
PDE6B-212ENST00000496514 TSPOAP1O95153 1857 aa16.19■□□□□ 0.18
PDE6B-212ENST00000496514 ADGRB3O60242 1522 aa16.19■□□□□ 0.18
PDE6B-212ENST00000496514 SIGLEC1Q9BZZ2 1709 aa16.19■□□□□ 0.18
PDE6B-212ENST00000496514 GGNBP2Q9H3C7 697 aa16.19■□□□□ 0.18
PDE6B-212ENST00000496514 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
PDE6B-212ENST00000496514 VGFO15240 615 aaPredicted RBP16.18■□□□□ 0.18
PDE6B-212ENST00000496514 PRAM1Q96QH2 718 aa16.17■□□□□ 0.18
PDE6B-212ENST00000496514 POGKQ9P215 609 aa16.17■□□□□ 0.18
PDE6B-212ENST00000496514 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
PDE6B-212ENST00000496514 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
PDE6B-212ENST00000496514 ZMYM4Q5VZL5 1548 aa16.16■□□□□ 0.18
PDE6B-212ENST00000496514 DIP2CQ9Y2E4 1556 aa16.15■□□□□ 0.18
PDE6B-212ENST00000496514 FANCIQ9NVI1 1328 aa16.15■□□□□ 0.18
PDE6B-212ENST00000496514 WAPLQ7Z5K2 1190 aa16.14■□□□□ 0.17
PDE6B-212ENST00000496514 SLFN5Q08AF3 891 aa16.14■□□□□ 0.17
PDE6B-212ENST00000496514 LMTK2Q8IWU2 1503 aa16.14■□□□□ 0.17
PDE6B-212ENST00000496514 PPM1GO15355 546 aaPredicted RBP16.13■□□□□ 0.17
PDE6B-212ENST00000496514 EVC2Q86UK5 1308 aa16.13■□□□□ 0.17
PDE6B-212ENST00000496514 U2SURPO15042 1029 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms