RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 PIAS4Q8N2W9 510 aaPredicted RBP18.8■□□□□ 0.6
ATG3-209ENST00000496423 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
ATG3-209ENST00000496423 TET3O43151 1660 aa18.79■□□□□ 0.6
ATG3-209ENST00000496423 ATF3P18847 181 aa18.79■□□□□ 0.6
ATG3-209ENST00000496423 NGLY1Q96IV0 654 aa18.79■□□□□ 0.6
ATG3-209ENST00000496423 QTRT2Q9H974 415 aaKnown RBP18.79■□□□□ 0.6
ATG3-209ENST00000496423 NCOA3Q9Y6Q9 1424 aa18.79■□□□□ 0.6
ATG3-209ENST00000496423 NWD1Q149M9 1564 aa18.79■□□□□ 0.6
ATG3-209ENST00000496423 HDGFP51858 240 aaKnown RBP18.78■□□□□ 0.6
ATG3-209ENST00000496423 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
ATG3-209ENST00000496423 AHDC1Q5TGY3 1603 aaPredicted RBP18.75■□□□□ 0.59
ATG3-209ENST00000496423 IDI1Q13907 227 aa18.74■□□□□ 0.59
ATG3-209ENST00000496423 C19orf44Q9H6X5 657 aa18.74■□□□□ 0.59
ATG3-209ENST00000496423 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
ATG3-209ENST00000496423 KANK1Q14678 1352 aa18.73■□□□□ 0.59
ATG3-209ENST00000496423 MROH1Q8NDA8 1641 aa18.73■□□□□ 0.59
ATG3-209ENST00000496423 CHD2O14647 1828 aaKnown RBP18.72■□□□□ 0.59
ATG3-209ENST00000496423 CCDC125Q86Z20 511 aa18.72■□□□□ 0.59
ATG3-209ENST00000496423 RGS12O14924 1447 aa18.72■□□□□ 0.59
ATG3-209ENST00000496423 DUOX2Q9NRD8 1548 aa18.71■□□□□ 0.59
ATG3-209ENST00000496423 C8orf37Q96NL8 207 aa18.71■□□□□ 0.59
ATG3-209ENST00000496423 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
ATG3-209ENST00000496423 LRRC59Q96AG4 307 aaKnown RBP18.7■□□□□ 0.58
ATG3-209ENST00000496423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.58
ATG3-209ENST00000496423 SRCAPQ6ZRS2 3230 aa18.69■□□□□ 0.58
ATG3-209ENST00000496423 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
ATG3-209ENST00000496423 TBX22Q9Y458 520 aa18.67■□□□□ 0.58
ATG3-209ENST00000496423 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
ATG3-209ENST00000496423 PLEKHG1Q9ULL1 1385 aa18.65■□□□□ 0.58
ATG3-209ENST00000496423 BRINP3Q76B58 766 aa18.64■□□□□ 0.57
ATG3-209ENST00000496423 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
ATG3-209ENST00000496423 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
ATG3-209ENST00000496423 SETBP1Q9Y6X0 1596 aa18.63■□□□□ 0.57
ATG3-209ENST00000496423 ERBINQ96RT1 1412 aa18.62■□□□□ 0.57
ATG3-209ENST00000496423 ADGRB3O60242 1522 aa18.62■□□□□ 0.57
ATG3-209ENST00000496423 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.61■□□□□ 0.57
ATG3-209ENST00000496423 TRPC5Q9UL62 973 aaPredicted RBP18.6■□□□□ 0.57
ATG3-209ENST00000496423 PIK3R4Q99570 1358 aa18.58■□□□□ 0.57
ATG3-209ENST00000496423 KIF15Q9NS87 1388 aa18.58■□□□□ 0.57
ATG3-209ENST00000496423 USP21Q9UK80 565 aa18.58■□□□□ 0.56
ATG3-209ENST00000496423 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
ATG3-209ENST00000496423 RRP7BPQ9NSQ0 103 aa18.57■□□□□ 0.56
ATG3-209ENST00000496423 ADAMTS2O95450 1211 aa18.56■□□□□ 0.56
ATG3-209ENST00000496423 DCCP43146 1447 aa18.55■□□□□ 0.56
ATG3-209ENST00000496423 RIMS2Q9UQ26 1411 aa18.55■□□□□ 0.56
ATG3-209ENST00000496423 LMTK2Q8IWU2 1503 aa18.54■□□□□ 0.56
ATG3-209ENST00000496423 NOS1P29475 1434 aa18.54■□□□□ 0.56
ATG3-209ENST00000496423 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
ATG3-209ENST00000496423 NHSL1Q5SYE7 1610 aa18.52■□□□□ 0.56
ATG3-209ENST00000496423 ZFYVE9O95405 1425 aa18.52■□□□□ 0.56
ATG3-209ENST00000496423 AMOTL2Q9Y2J4 779 aa18.52■□□□□ 0.56
ATG3-209ENST00000496423 PNPLA6Q8IY17 1366 aa18.52■□□□□ 0.55
ATG3-209ENST00000496423 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
ATG3-209ENST00000496423 CHGAP10645 457 aaKnown RBP18.49■□□□□ 0.55
ATG3-209ENST00000496423 FNBP4Q8N3X1 1017 aaPredicted RBP18.48■□□□□ 0.55
ATG3-209ENST00000496423 MYO5BQ9ULV0 1848 aa18.48■□□□□ 0.55
ATG3-209ENST00000496423 TRPM2O94759 1503 aa18.47■□□□□ 0.55
ATG3-209ENST00000496423 LRP5O75197 1615 aa18.46■□□□□ 0.55
ATG3-209ENST00000496423 RPRD2Q5VT52 1461 aaKnown RBP18.46■□□□□ 0.54
ATG3-209ENST00000496423 GCC2Q8IWJ2 1684 aa18.45■□□□□ 0.54
ATG3-209ENST00000496423 MST1RQ04912 1400 aa18.45■□□□□ 0.54
ATG3-209ENST00000496423 PTCH1Q13635 1447 aa18.45■□□□□ 0.54
ATG3-209ENST00000496423 BLMP54132 1417 aaPredicted RBP18.44■□□□□ 0.54
ATG3-209ENST00000496423 ADAMTS13Q76LX8 1427 aa18.44■□□□□ 0.54
ATG3-209ENST00000496423 ATRNO75882 1429 aa18.43■□□□□ 0.54
ATG3-209ENST00000496423 ANKRD30AQ9BXX3 1397 aa18.42■□□□□ 0.54
ATG3-209ENST00000496423 TMEM131LA2VDJ0 1609 aa18.42■□□□□ 0.54
ATG3-209ENST00000496423 DDX17Q92841 729 aaKnown RBP18.42■□□□□ 0.54
ATG3-209ENST00000496423 CROCC2H7BZ55 1655 aa18.41■□□□□ 0.54
ATG3-209ENST00000496423 GJD4Q96KN9 370 aaPredicted RBP18.4■□□□□ 0.54
ATG3-209ENST00000496423 ABCC5O15440 1437 aa18.39■□□□□ 0.53
ATG3-209ENST00000496423 DEFB132Q7Z7B7 95 aa18.36■□□□□ 0.53
ATG3-209ENST00000496423 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
ATG3-209ENST00000496423 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
ATG3-209ENST00000496423 DAPK1P53355 1430 aa18.34■□□□□ 0.53
ATG3-209ENST00000496423 SOS2Q07890 1332 aaPredicted RBP18.34■□□□□ 0.53
ATG3-209ENST00000496423 EP400Q96L91 3159 aa18.34■□□□□ 0.53
ATG3-209ENST00000496423 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
ATG3-209ENST00000496423 YY1P25490 414 aa18.32■□□□□ 0.52
ATG3-209ENST00000496423 HRCP23327 699 aa18.31■□□□□ 0.52
ATG3-209ENST00000496423 XRN1Q8IZH2 1706 aaKnown RBP18.3■□□□□ 0.52
ATG3-209ENST00000496423 BAG6P46379 1132 aa18.3■□□□□ 0.52
ATG3-209ENST00000496423 C1orf167Q5SNV9 1468 aa18.3■□□□□ 0.52
ATG3-209ENST00000496423 BCL9LQ86UU0 1499 aa18.3■□□□□ 0.52
ATG3-209ENST00000496423 LAMC1P11047 1609 aa18.3■□□□□ 0.52
ATG3-209ENST00000496423 PTPN23Q9H3S7 1636 aa18.3■□□□□ 0.52
ATG3-209ENST00000496423 UNC13BO14795 1591 aa18.3■□□□□ 0.52
ATG3-209ENST00000496423 PSDA5PKW4 1024 aaPredicted RBP18.29■□□□□ 0.52
ATG3-209ENST00000496423 COL22A1Q8NFW1 1626 aaPredicted RBP18.28■□□□□ 0.52
ATG3-209ENST00000496423 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
ATG3-209ENST00000496423 SPHKAPQ2M3C7 1700 aa18.27■□□□□ 0.52
ATG3-209ENST00000496423 MARF1Q9Y4F3 1742 aaKnown RBP18.27■□□□□ 0.52
ATG3-209ENST00000496423 KANK4Q5T7N3 995 aaPredicted RBP18.27■□□□□ 0.52
ATG3-209ENST00000496423 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.52
ATG3-209ENST00000496423 ORAI2Q96SN7 254 aa18.26■□□□□ 0.51
ATG3-209ENST00000496423 NPHP3Q7Z494 1330 aa18.24■□□□□ 0.51
ATG3-209ENST00000496423 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.24■□□□□ 0.51
ATG3-209ENST00000496423 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
ATG3-209ENST00000496423 ZNF326Q5BKZ1 582 aaKnown RBP18.23■□□□□ 0.51
ATG3-209ENST00000496423 SEPT12Q8IYM1 358 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms