RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 ATP10AO60312 1499 aa26.66■■□□□ 1.86
LYSMD4-209ENST00000496108 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.66■■□□□ 1.86
LYSMD4-209ENST00000496108 WDR7Q9Y4E6 1490 aa26.65■■□□□ 1.86
LYSMD4-209ENST00000496108 RGL3Q3MIN7 710 aa26.65■■□□□ 1.86
LYSMD4-209ENST00000496108 SAMD9LQ8IVG5 1584 aa26.65■■□□□ 1.86
LYSMD4-209ENST00000496108 MAST1Q9Y2H9 1570 aa26.65■■□□□ 1.86
LYSMD4-209ENST00000496108 PPP2R1AP30153 589 aa26.64■■□□□ 1.86
LYSMD4-209ENST00000496108 IQGAP3Q86VI3 1631 aa26.63■■□□□ 1.85
LYSMD4-209ENST00000496108 MAGI2Q86UL8 1455 aa26.63■■□□□ 1.85
LYSMD4-209ENST00000496108 FRAT2O75474 233 aaPredicted RBP26.62■■□□□ 1.85
LYSMD4-209ENST00000496108 PIK3C2GO75747 1445 aa26.62■■□□□ 1.85
LYSMD4-209ENST00000496108 SLFN5Q08AF3 891 aa26.62■■□□□ 1.85
LYSMD4-209ENST00000496108 TRMT2AQ8IZ69 625 aaKnown RBP26.62■■□□□ 1.85
LYSMD4-209ENST00000496108 PREX2Q70Z35 1606 aa26.61■■□□□ 1.85
LYSMD4-209ENST00000496108 VIRMAQ69YN4 1812 aaKnown RBP26.59■■□□□ 1.85
LYSMD4-209ENST00000496108 KNSTRNQ9Y448 316 aa26.59■■□□□ 1.85
LYSMD4-209ENST00000496108 SYNMO15061 1565 aa26.59■■□□□ 1.85
LYSMD4-209ENST00000496108 FAM43AQ8N2R8 423 aa26.58■■□□□ 1.85
LYSMD4-209ENST00000496108 ABCC2Q92887 1545 aa26.58■■□□□ 1.84
LYSMD4-209ENST00000496108 AMER1Q5JTC6 1135 aaPredicted RBP26.57■■□□□ 1.84
LYSMD4-209ENST00000496108 NKTRP30414 1462 aaKnown RBP26.56■■□□□ 1.84
LYSMD4-209ENST00000496108 RGS3P49796 1198 aa26.56■■□□□ 1.84
LYSMD4-209ENST00000496108 NPC1L1Q9UHC9 1359 aa26.56■■□□□ 1.84
LYSMD4-209ENST00000496108 CDC42BPBQ9Y5S2 1711 aa26.56■■□□□ 1.84
LYSMD4-209ENST00000496108 PLXNC1O60486 1568 aa26.54■■□□□ 1.84
LYSMD4-209ENST00000496108 ASXL1Q8IXJ9 1541 aa26.54■■□□□ 1.84
LYSMD4-209ENST00000496108 IQGAP1P46940 1657 aa26.53■■□□□ 1.84
LYSMD4-209ENST00000496108 CDCA8Q53HL2 280 aa26.52■■□□□ 1.84
LYSMD4-209ENST00000496108 NINLQ9Y2I6 1382 aa26.51■■□□□ 1.83
LYSMD4-209ENST00000496108 USP19O94966 1318 aa26.51■■□□□ 1.83
LYSMD4-209ENST00000496108 UBE2Q2Q8WVN8 375 aa26.5■■□□□ 1.83
LYSMD4-209ENST00000496108 RSPH6AQ9H0K4 717 aa26.5■■□□□ 1.83
LYSMD4-209ENST00000496108 NGEFQ8N5V2 710 aa26.49■■□□□ 1.83
LYSMD4-209ENST00000496108 SYCP2Q9BX26 1530 aa26.49■■□□□ 1.83
LYSMD4-209ENST00000496108 MAPK8IP3Q9UPT6 1336 aa26.48■■□□□ 1.83
LYSMD4-209ENST00000496108 CGNL1Q0VF96 1302 aa26.48■■□□□ 1.83
LYSMD4-209ENST00000496108 MADDQ8WXG6 1647 aa26.47■■□□□ 1.83
LYSMD4-209ENST00000496108 E9PSI1 815 aa26.46■■□□□ 1.83
LYSMD4-209ENST00000496108 PDE3AQ14432 1141 aa26.46■■□□□ 1.83
LYSMD4-209ENST00000496108 BECN1Q14457 450 aa26.46■■□□□ 1.83
LYSMD4-209ENST00000496108 DUOX2Q9NRD8 1548 aa26.45■■□□□ 1.82
LYSMD4-209ENST00000496108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.43■■□□□ 1.82
LYSMD4-209ENST00000496108 SCAF11Q99590 1463 aaKnown RBP26.43■■□□□ 1.82
LYSMD4-209ENST00000496108 ZMYM3Q14202 1370 aa26.42■■□□□ 1.82
LYSMD4-209ENST00000496108 SCAPERQ9BY12 1400 aa26.42■■□□□ 1.82
LYSMD4-209ENST00000496108 MYOM1P52179 1685 aa26.41■■□□□ 1.82
LYSMD4-209ENST00000496108 IGHDP01880 384 aa26.41■■□□□ 1.82
LYSMD4-209ENST00000496108 SPINK5Q9NQ38 1064 aaPredicted RBP26.41■■□□□ 1.82
LYSMD4-209ENST00000496108 NLRP1Q9C000 1473 aa26.41■■□□□ 1.82
LYSMD4-209ENST00000496108 BCAR3O75815 825 aa26.41■■□□□ 1.82
LYSMD4-209ENST00000496108 STAC3Q96MF2 364 aa26.4■■□□□ 1.82
LYSMD4-209ENST00000496108 APAF1O14727 1248 aa26.38■■□□□ 1.81
LYSMD4-209ENST00000496108 CLUAP1Q96AJ1 413 aa26.38■■□□□ 1.81
LYSMD4-209ENST00000496108 L1TD1Q5T7N2 865 aaKnown RBP26.37■■□□□ 1.81
LYSMD4-209ENST00000496108 ARHGAP5Q13017 1502 aa26.37■■□□□ 1.81
LYSMD4-209ENST00000496108 CCDC146Q8IYE0 955 aa26.37■■□□□ 1.81
LYSMD4-209ENST00000496108 AAMPQ13685 434 aa26.36■■□□□ 1.81
LYSMD4-209ENST00000496108 POGKQ9P215 609 aa26.35■■□□□ 1.81
LYSMD4-209ENST00000496108 SPHKAPQ2M3C7 1700 aa26.35■■□□□ 1.81
LYSMD4-209ENST00000496108 EIF5BO60841 1220 aaKnown RBP26.34■■□□□ 1.81
LYSMD4-209ENST00000496108 ANTXR1Q9H6X2 564 aa26.33■■□□□ 1.81
LYSMD4-209ENST00000496108 TTC37Q6PGP7 1564 aa26.33■■□□□ 1.8
LYSMD4-209ENST00000496108 NPM1P06748 294 aaKnown RBP eCLIP26.33■■□□□ 1.8
LYSMD4-209ENST00000496108 SEC24BO95487 1268 aa26.32■■□□□ 1.8
LYSMD4-209ENST00000496108 CENPJQ9HC77 1338 aaPredicted RBP26.32■■□□□ 1.8
LYSMD4-209ENST00000496108 UHRF1BP1LA0JNW5 1464 aa26.32■■□□□ 1.8
LYSMD4-209ENST00000496108 KDM5AP29375 1690 aaKnown RBP26.31■■□□□ 1.8
LYSMD4-209ENST00000496108 TRPM2O94759 1503 aa26.3■■□□□ 1.8
LYSMD4-209ENST00000496108 TRHP20396 242 aaPredicted RBP26.3■■□□□ 1.8
LYSMD4-209ENST00000496108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.8
LYSMD4-209ENST00000496108 SLC24A1O60721 1099 aa26.28■■□□□ 1.8
LYSMD4-209ENST00000496108 PMFBP1Q8TBY8 1022 aa26.28■■□□□ 1.8
LYSMD4-209ENST00000496108 UPF2Q9HAU5 1272 aaKnown RBP26.27■■□□□ 1.8
LYSMD4-209ENST00000496108 KIAA1210Q9ULL0 1709 aa26.26■■□□□ 1.79
LYSMD4-209ENST00000496108 TBC1D32Q96NH3 1257 aa26.26■■□□□ 1.79
LYSMD4-209ENST00000496108 DMRT2Q9Y5R5 561 aa26.26■■□□□ 1.79
LYSMD4-209ENST00000496108 CEP152O94986 1710 aa26.26■■□□□ 1.79
LYSMD4-209ENST00000496108 SLKQ9H2G2 1235 aaPredicted RBP26.25■■□□□ 1.79
LYSMD4-209ENST00000496108 CANXP27824 592 aaKnown RBP26.24■■□□□ 1.79
LYSMD4-209ENST00000496108 COG6Q9Y2V7 657 aa26.24■■□□□ 1.79
LYSMD4-209ENST00000496108 POLR3AO14802 1390 aaPredicted RBP26.24■■□□□ 1.79
LYSMD4-209ENST00000496108 PANK1Q8TE04 598 aa26.23■■□□□ 1.79
LYSMD4-209ENST00000496108 PTPRTO14522 1441 aa26.23■■□□□ 1.79
LYSMD4-209ENST00000496108 WWC1Q8IX03 1113 aa26.22■■□□□ 1.79
LYSMD4-209ENST00000496108 ZCCHC11Q5TAX3 1644 aaKnown RBP26.21■■□□□ 1.79
LYSMD4-209ENST00000496108 RRAGDQ9NQL2 400 aaPredicted RBP26.2■■□□□ 1.78
LYSMD4-209ENST00000496108 TBC1D2Q9BYX2 928 aa26.19■■□□□ 1.78
LYSMD4-209ENST00000496108 NEURL4Q96JN8 1562 aa26.19■■□□□ 1.78
LYSMD4-209ENST00000496108 ERVK-7P63135 1459 aa26.17■■□□□ 1.78
LYSMD4-209ENST00000496108 CLTCL1P53675 1640 aa26.17■■□□□ 1.78
LYSMD4-209ENST00000496108 FSD2A1L4K1 749 aa26.16■■□□□ 1.78
LYSMD4-209ENST00000496108 KIF13AQ9H1H9 1805 aa26.16■■□□□ 1.78
LYSMD4-209ENST00000496108 RARSP54136 660 aaKnown RBP26.16■■□□□ 1.78
LYSMD4-209ENST00000496108 IQSEC2Q5JU85 1478 aa26.13■■□□□ 1.77
LYSMD4-209ENST00000496108 GOLGA6L3A6NEY3 463 aa26.13■■□□□ 1.77
LYSMD4-209ENST00000496108 PCDHB15Q9Y5E8 787 aa26.13■■□□□ 1.77
LYSMD4-209ENST00000496108 PHF23Q9BUL5 403 aaPredicted RBP26.12■■□□□ 1.77
LYSMD4-209ENST00000496108 CARD14Q9BXL6 1004 aa26.12■■□□□ 1.77
LYSMD4-209ENST00000496108 PDZRN3Q9UPQ7 1066 aa26.12■■□□□ 1.77
LYSMD4-209ENST00000496108 RWDD1Q9H446 243 aaPredicted RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms