RNA–Protein interactions for RNA: ENST00000496106.5

ARHGEF3-213, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene ARHGEF3, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-213ENST00000496106 NRXN1Q9ULB1 1477 aa18.45■□□□□ 0.54
ARHGEF3-213ENST00000496106 IQGAP1P46940 1657 aa18.43■□□□□ 0.54
ARHGEF3-213ENST00000496106 ST20-MTHFSA0A0A6YYL1 179 aa18.43■□□□□ 0.54
ARHGEF3-213ENST00000496106 PRKRIP1Q9H875 184 aaPredicted RBP18.43■□□□□ 0.54
ARHGEF3-213ENST00000496106 MYO5BQ9ULV0 1848 aa18.42■□□□□ 0.54
ARHGEF3-213ENST00000496106 ERVK-7P63135 1459 aa18.41■□□□□ 0.54
ARHGEF3-213ENST00000496106 ADGRF5Q8IZF2 1346 aa18.41■□□□□ 0.54
ARHGEF3-213ENST00000496106 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
ARHGEF3-213ENST00000496106 IDI1Q13907 227 aa18.4■□□□□ 0.54
ARHGEF3-213ENST00000496106 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF3-213ENST00000496106 SLC52A1Q9NWF4 448 aa18.39■□□□□ 0.53
ARHGEF3-213ENST00000496106 TMEM131LA2VDJ0 1609 aa18.39■□□□□ 0.53
ARHGEF3-213ENST00000496106 SPATA31D1Q6ZQQ2 1576 aa18.39■□□□□ 0.53
ARHGEF3-213ENST00000496106 RPGRIP1LQ68CZ1 1315 aa18.38■□□□□ 0.53
ARHGEF3-213ENST00000496106 NEXMIFQ5QGS0 1516 aa18.38■□□□□ 0.53
ARHGEF3-213ENST00000496106 MLECQ14165 292 aa18.37■□□□□ 0.53
ARHGEF3-213ENST00000496106 CHGAP10645 457 aaKnown RBP18.37■□□□□ 0.53
ARHGEF3-213ENST00000496106 TESK2Q96S53 571 aa18.35■□□□□ 0.53
ARHGEF3-213ENST00000496106 PIK3C2GO75747 1445 aa18.35■□□□□ 0.53
ARHGEF3-213ENST00000496106 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
ARHGEF3-213ENST00000496106 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.53
ARHGEF3-213ENST00000496106 SETBP1Q9Y6X0 1596 aa18.33■□□□□ 0.52
ARHGEF3-213ENST00000496106 ZMYM3Q14202 1370 aa18.32■□□□□ 0.52
ARHGEF3-213ENST00000496106 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
ARHGEF3-213ENST00000496106 ZFYVE9O95405 1425 aa18.3■□□□□ 0.52
ARHGEF3-213ENST00000496106 POLR3GLQ9BT43 218 aa18.3■□□□□ 0.52
ARHGEF3-213ENST00000496106 ADGRB1O14514 1584 aa18.29■□□□□ 0.52
ARHGEF3-213ENST00000496106 C14orf93Q9H972 538 aaKnown RBP18.29■□□□□ 0.52
ARHGEF3-213ENST00000496106 MRS2Q9HD23 443 aa18.29■□□□□ 0.52
ARHGEF3-213ENST00000496106 KTN1Q86UP2 1357 aaKnown RBP18.29■□□□□ 0.52
ARHGEF3-213ENST00000496106 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
ARHGEF3-213ENST00000496106 CCDC184Q52MB2 194 aa18.28■□□□□ 0.52
ARHGEF3-213ENST00000496106 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
ARHGEF3-213ENST00000496106 MYO3AQ8NEV4 1616 aa18.27■□□□□ 0.51
ARHGEF3-213ENST00000496106 VGFO15240 615 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF3-213ENST00000496106 A2ML1A8K2U0 1454 aa18.25■□□□□ 0.51
ARHGEF3-213ENST00000496106 ESF1Q9H501 851 aaKnown RBP18.24■□□□□ 0.51
ARHGEF3-213ENST00000496106 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
ARHGEF3-213ENST00000496106 TMF1P82094 1093 aa18.22■□□□□ 0.51
ARHGEF3-213ENST00000496106 EIF3AQ14152 1382 aaKnown RBP18.22■□□□□ 0.51
ARHGEF3-213ENST00000496106 FER1L4A9Z1Z3 1794 aa18.21■□□□□ 0.51
ARHGEF3-213ENST00000496106 C3P01024 1663 aa18.21■□□□□ 0.51
ARHGEF3-213ENST00000496106 KDM5AP29375 1690 aaKnown RBP18.21■□□□□ 0.51
ARHGEF3-213ENST00000496106 ASXL1Q8IXJ9 1541 aa18.19■□□□□ 0.5
ARHGEF3-213ENST00000496106 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
ARHGEF3-213ENST00000496106 TNRQ92752 1358 aa18.18■□□□□ 0.5
ARHGEF3-213ENST00000496106 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
ARHGEF3-213ENST00000496106 RALBP1Q15311 655 aa18.18■□□□□ 0.5
ARHGEF3-213ENST00000496106 TMEM132EQ6IEE7 984 aa18.18■□□□□ 0.5
ARHGEF3-213ENST00000496106 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
ARHGEF3-213ENST00000496106 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
ARHGEF3-213ENST00000496106 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
ARHGEF3-213ENST00000496106 SBNO2Q9Y2G9 1366 aa18.17■□□□□ 0.5
ARHGEF3-213ENST00000496106 NEFLP07196 543 aa18.17■□□□□ 0.5
ARHGEF3-213ENST00000496106 BRD4O60885 1362 aaPredicted RBP18.16■□□□□ 0.5
ARHGEF3-213ENST00000496106 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
ARHGEF3-213ENST00000496106 MYBBP1AQ9BQG0 1328 aaKnown RBP18.16■□□□□ 0.5
ARHGEF3-213ENST00000496106 MYOM1P52179 1685 aa18.16■□□□□ 0.5
ARHGEF3-213ENST00000496106 QRICH2Q9H0J4 1663 aa18.16■□□□□ 0.5
ARHGEF3-213ENST00000496106 PARD3Q8TEW0 1356 aa18.16■□□□□ 0.5
ARHGEF3-213ENST00000496106 SETD1AO15047 1707 aaKnown RBP18.16■□□□□ 0.5
ARHGEF3-213ENST00000496106 RIMS2Q9UQ26 1411 aa18.15■□□□□ 0.5
ARHGEF3-213ENST00000496106 ALKQ9UM73 1620 aa18.15■□□□□ 0.5
ARHGEF3-213ENST00000496106 PER1O15534 1290 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF3-213ENST00000496106 TRAK1Q9UPV9 953 aa18.13■□□□□ 0.49
ARHGEF3-213ENST00000496106 CEBPAP49715 358 aaPredicted RBP18.13■□□□□ 0.49
ARHGEF3-213ENST00000496106 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
ARHGEF3-213ENST00000496106 CENPJQ9HC77 1338 aaPredicted RBP18.12■□□□□ 0.49
ARHGEF3-213ENST00000496106 SLC24A1O60721 1099 aa18.11■□□□□ 0.49
ARHGEF3-213ENST00000496106 FKBP8Q14318 412 aa18.11■□□□□ 0.49
ARHGEF3-213ENST00000496106 CDCA8Q53HL2 280 aa18.11■□□□□ 0.49
ARHGEF3-213ENST00000496106 NLRP1Q9C000 1473 aa18.11■□□□□ 0.49
ARHGEF3-213ENST00000496106 PTPRMP28827 1452 aa18.1■□□□□ 0.49
ARHGEF3-213ENST00000496106 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
ARHGEF3-213ENST00000496106 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
ARHGEF3-213ENST00000496106 PANK3Q9H999 370 aa18.09■□□□□ 0.49
ARHGEF3-213ENST00000496106 PNISRQ8TF01 805 aaKnown RBP18.08■□□□□ 0.49
ARHGEF3-213ENST00000496106 ADAMTSL3P82987 1691 aa18.07■□□□□ 0.48
ARHGEF3-213ENST00000496106 CNGB1Q14028 1251 aaPredicted RBP18.07■□□□□ 0.48
ARHGEF3-213ENST00000496106 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
ARHGEF3-213ENST00000496106 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
ARHGEF3-213ENST00000496106 TMEM2Q9UHN6 1383 aa18.07■□□□□ 0.48
ARHGEF3-213ENST00000496106 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.06■□□□□ 0.48
ARHGEF3-213ENST00000496106 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
ARHGEF3-213ENST00000496106 RIMS1Q86UR5 1692 aaKnown RBP18.05■□□□□ 0.48
ARHGEF3-213ENST00000496106 TULP4Q9NRJ4 1543 aa18.04■□□□□ 0.48
ARHGEF3-213ENST00000496106 SMG6Q86US8 1419 aaKnown RBP18.02■□□□□ 0.48
ARHGEF3-213ENST00000496106 DLC1Q96QB1 1528 aa18.02■□□□□ 0.47
ARHGEF3-213ENST00000496106 ARHGAP23Q9P227 1491 aa18.01■□□□□ 0.47
ARHGEF3-213ENST00000496106 INSRP06213 1382 aa18.01■□□□□ 0.47
ARHGEF3-213ENST00000496106 STK26Q9P289 416 aa18.01■□□□□ 0.47
ARHGEF3-213ENST00000496106 SLIT1O75093 1534 aa18.01■□□□□ 0.47
ARHGEF3-213ENST00000496106 HDGFP51858 240 aaKnown RBP18■□□□□ 0.47
ARHGEF3-213ENST00000496106 PUS7Q96PZ0 661 aaKnown RBP18■□□□□ 0.47
ARHGEF3-213ENST00000496106 LTKP29376 864 aa17.99■□□□□ 0.47
ARHGEF3-213ENST00000496106 NPC1L1Q9UHC9 1359 aa17.99■□□□□ 0.47
ARHGEF3-213ENST00000496106 KNDC1Q76NI1 1749 aa17.98■□□□□ 0.47
ARHGEF3-213ENST00000496106 METP08581 1390 aa17.98■□□□□ 0.47
ARHGEF3-213ENST00000496106 BCANQ96GW7 911 aa17.98■□□□□ 0.47
ARHGEF3-213ENST00000496106 ABCC11Q96J66 1382 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms