RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ARHGEF40Q8TER5 1519 aa7.27□□□□□ -1.25
VPS52-222ENST00000495981 PTPRTO14522 1441 aa7.27□□□□□ -1.25
VPS52-222ENST00000495981 GOLGA2Q08379 1002 aa7.26□□□□□ -1.25
VPS52-222ENST00000495981 DCBLD2Q96PD2 775 aa7.26□□□□□ -1.25
VPS52-222ENST00000495981 DPY19L2Q6NUT2 758 aa7.25□□□□□ -1.25
VPS52-222ENST00000495981 PODXL2Q9NZ53 605 aa7.25□□□□□ -1.25
VPS52-222ENST00000495981 MED1Q15648 1581 aaPredicted RBP7.25□□□□□ -1.25
VPS52-222ENST00000495981 RICTORQ6R327 1708 aa7.24□□□□□ -1.25
VPS52-222ENST00000495981 PHLDB1Q86UU1 1377 aa7.24□□□□□ -1.25
VPS52-222ENST00000495981 FOXK1P85037 733 aa7.24□□□□□ -1.25
VPS52-222ENST00000495981 ATP10BO94823 1461 aa7.24□□□□□ -1.25
VPS52-222ENST00000495981 NUP153P49790 1475 aaKnown RBP7.24□□□□□ -1.25
VPS52-222ENST00000495981 ZNF316A6NFI3 1004 aaPredicted RBP7.23□□□□□ -1.25
VPS52-222ENST00000495981 TTLL13PA6NNM8 815 aa7.23□□□□□ -1.25
VPS52-222ENST00000495981 AMHR2Q16671 573 aa7.23□□□□□ -1.25
VPS52-222ENST00000495981 PARP9Q8IXQ6 854 aa7.23□□□□□ -1.25
VPS52-222ENST00000495981 CCDC102AQ96A19 550 aa7.23□□□□□ -1.25
VPS52-222ENST00000495981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.23□□□□□ -1.252e-8■■■■□ 19.8
VPS52-222ENST00000495981 TTC37Q6PGP7 1564 aa7.23□□□□□ -1.25
VPS52-222ENST00000495981 MINK1Q8N4C8 1332 aaPredicted RBP7.23□□□□□ -1.25
VPS52-222ENST00000495981 FHOD3Q2V2M9 1422 aa7.22□□□□□ -1.25
VPS52-222ENST00000495981 ONECUT3O60422 494 aaPredicted RBP7.22□□□□□ -1.25
VPS52-222ENST00000495981 TIE1P35590 1138 aa7.22□□□□□ -1.25
VPS52-222ENST00000495981 PIP4K2BP78356 416 aa7.22□□□□□ -1.25
VPS52-222ENST00000495981 TRIM26Q12899 539 aaPredicted RBP7.22□□□□□ -1.25
VPS52-222ENST00000495981 MAP2K5Q13163 448 aa7.22□□□□□ -1.25
VPS52-222ENST00000495981 MICALL2Q8IY33 904 aa7.22□□□□□ -1.25
VPS52-222ENST00000495981 ZMYM4Q5VZL5 1548 aa7.22□□□□□ -1.25
VPS52-222ENST00000495981 CFAP74Q9C0B2 1584 aa7.21□□□□□ -1.25
VPS52-222ENST00000495981 IRF6O14896 467 aa7.21□□□□□ -1.26
VPS52-222ENST00000495981 POTEIP0CG38 1075 aa7.21□□□□□ -1.26
VPS52-222ENST00000495981 FECHP22830 423 aa7.21□□□□□ -1.26
VPS52-222ENST00000495981 IQSEC2Q5JU85 1478 aa7.21□□□□□ -1.26
VPS52-222ENST00000495981 NEO1Q92859 1461 aa7.21□□□□□ -1.26
VPS52-222ENST00000495981 EFCAB5A4FU69 1503 aa7.21□□□□□ -1.26
VPS52-222ENST00000495981 AKNAQ7Z591 1439 aa7.2□□□□□ -1.26
VPS52-222ENST00000495981 DENND4BO75064 1496 aaPredicted RBP7.2□□□□□ -1.26
VPS52-222ENST00000495981 KIF3CO14782 793 aa7.2□□□□□ -1.26
VPS52-222ENST00000495981 OSBPP22059 807 aa7.2□□□□□ -1.26
VPS52-222ENST00000495981 HRCP23327 699 aa7.2□□□□□ -1.26
VPS52-222ENST00000495981 ASTLQ6HA08 431 aaPredicted RBP7.2□□□□□ -1.26
VPS52-222ENST00000495981 BMP2KQ9NSY1 1161 aaPredicted RBP7.2□□□□□ -1.26
VPS52-222ENST00000495981 NCOA1Q15788 1441 aa7.19□□□□□ -1.26
VPS52-222ENST00000495981 UHRF1BP1Q6BDS2 1440 aa7.19□□□□□ -1.26
VPS52-222ENST00000495981 POGZQ7Z3K3 1410 aa7.19□□□□□ -1.26
VPS52-222ENST00000495981 ARHGEF12Q9NZN5 1544 aa7.19□□□□□ -1.26
VPS52-222ENST00000495981 ATMINO43313 823 aaPredicted RBP7.19□□□□□ -1.26
VPS52-222ENST00000495981 PRIM1P49642 420 aaKnown RBP7.19□□□□□ -1.26
VPS52-222ENST00000495981 PDCD7Q8N8D1 485 aaKnown RBP7.19□□□□□ -1.26
VPS52-222ENST00000495981 DDRGK1Q96HY6 314 aa7.19□□□□□ -1.26
VPS52-222ENST00000495981 FANCAO15360 1455 aa7.18□□□□□ -1.26
VPS52-222ENST00000495981 POTEAQ6S8J7 498 aa7.18□□□□□ -1.26
VPS52-222ENST00000495981 PLPP6Q8IY26 295 aa7.18□□□□□ -1.26
VPS52-222ENST00000495981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS52-222ENST00000495981 C2orf72A6NCS6 295 aa7.17□□□□□ -1.26
VPS52-222ENST00000495981 GRXCR2A6NFK2 248 aa7.17□□□□□ -1.26
VPS52-222ENST00000495981 ATN1P54259 1190 aaPredicted RBP7.17□□□□□ -1.26
VPS52-222ENST00000495981 TMEM121BQ9BXQ6 578 aaPredicted RBP7.17□□□□□ -1.26
VPS52-222ENST00000495981 LRRIQ1Q96JM4 1722 aa7.17□□□□□ -1.26
VPS52-222ENST00000495981 EEA1Q15075 1411 aa7.17□□□□□ -1.26
VPS52-222ENST00000495981 NUTM2FA1L443 756 aa7.16□□□□□ -1.26
VPS52-222ENST00000495981 GNPATO15228 680 aa7.16□□□□□ -1.26
VPS52-222ENST00000495981 TMC2Q8TDI7 906 aa7.16□□□□□ -1.26
VPS52-222ENST00000495981 ARID3AQ99856 593 aa7.16□□□□□ -1.26
VPS52-222ENST00000495981 TRIM35Q9UPQ4 493 aa7.16□□□□□ -1.26
VPS52-222ENST00000495981 CDK13Q14004 1512 aaKnown RBP7.16□□□□□ -1.26
VPS52-222ENST00000495981 GOPCQ9HD26 462 aa7.15□□□□□ -1.26
VPS52-222ENST00000495981 KIF14Q15058 1648 aa7.15□□□□□ -1.27
VPS52-222ENST00000495981 HECW1Q76N89 1606 aa7.15□□□□□ -1.27
VPS52-222ENST00000495981 PTGER2P43116 358 aa7.14□□□□□ -1.27
VPS52-222ENST00000495981 HIC1Q14526 733 aa7.14□□□□□ -1.27
VPS52-222ENST00000495981 ZFYVE16Q7Z3T8 1539 aa7.14□□□□□ -1.27
VPS52-222ENST00000495981 PELP1Q8IZL8 1130 aaKnown RBP7.14□□□□□ -1.27
VPS52-222ENST00000495981 REPIN1Q9BWE0 567 aaKnown RBP7.14□□□□□ -1.27
VPS52-222ENST00000495981 MYO5CQ9NQX4 1742 aa7.14□□□□□ -1.27
VPS52-222ENST00000495981 FER1L4A9Z1Z3 1794 aa7.13□□□□□ -1.27
VPS52-222ENST00000495981 PREX1Q8TCU6 1659 aa7.13□□□□□ -1.27
VPS52-222ENST00000495981 APBB1O00213 710 aa7.13□□□□□ -1.27
VPS52-222ENST00000495981 MS4A1P11836 297 aa7.13□□□□□ -1.27
VPS52-222ENST00000495981 FLIIQ13045 1269 aa7.13□□□□□ -1.27
VPS52-222ENST00000495981 ALKQ9UM73 1620 aa7.12□□□□□ -1.27
VPS52-222ENST00000495981 KDM5CP41229 1560 aa7.12□□□□□ -1.27
VPS52-222ENST00000495981 ATP10AO60312 1499 aa7.12□□□□□ -1.27
VPS52-222ENST00000495981 TRAPPC8Q9Y2L5 1435 aa7.12□□□□□ -1.27
VPS52-222ENST00000495981 FCHSD2O94868 740 aa7.12□□□□□ -1.27
VPS52-222ENST00000495981 OXER1Q8TDS5 423 aa7.12□□□□□ -1.27
VPS52-222ENST00000495981 SCAPERQ9BY12 1400 aa7.11□□□□□ -1.27
VPS52-222ENST00000495981 IRX5P78411 483 aaPredicted RBP7.11□□□□□ -1.27
VPS52-222ENST00000495981 MAP3K9P80192 1104 aa7.11□□□□□ -1.27
VPS52-222ENST00000495981 PTGDRQ13258 359 aa7.11□□□□□ -1.27
VPS52-222ENST00000495981 TMEM92Q6UXU6 159 aa7.11□□□□□ -1.27
VPS52-222ENST00000495981 AFAP1Q8N556 730 aa7.11□□□□□ -1.27
VPS52-222ENST00000495981 SLC39A7Q92504 469 aa7.11□□□□□ -1.27
VPS52-222ENST00000495981 TMUB1Q9BVT8 246 aa7.11□□□□□ -1.27
VPS52-222ENST00000495981 PREX2Q70Z35 1606 aa7.11□□□□□ -1.27
VPS52-222ENST00000495981 ABCA6Q8N139 1617 aa7.1□□□□□ -1.27
VPS52-222ENST00000495981 TOM1O60784 492 aa7.1□□□□□ -1.27
VPS52-222ENST00000495981 C7P10643 843 aa7.1□□□□□ -1.27
VPS52-222ENST00000495981 GIGYF2Q6Y7W6 1299 aaKnown RBP7.1□□□□□ -1.27
VPS52-222ENST00000495981 DDX12PQ92771 950 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms