RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 PPLO60437 1756 aa16.37■□□□□ 0.21
SLC13A3-211ENST00000495082 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
SLC13A3-211ENST00000495082 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
SLC13A3-211ENST00000495082 MYO5BQ9ULV0 1848 aa16.34■□□□□ 0.21
SLC13A3-211ENST00000495082 TRPM1Q7Z4N2 1603 aa16.34■□□□□ 0.21
SLC13A3-211ENST00000495082 MYO3AQ8NEV4 1616 aa16.34■□□□□ 0.21
SLC13A3-211ENST00000495082 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
SLC13A3-211ENST00000495082 PIK3C2GO75747 1445 aa16.34■□□□□ 0.21
SLC13A3-211ENST00000495082 UBR1Q8IWV7 1749 aa16.33■□□□□ 0.21
SLC13A3-211ENST00000495082 ROCK2O75116 1388 aaKnown RBP16.32■□□□□ 0.2
SLC13A3-211ENST00000495082 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
SLC13A3-211ENST00000495082 RIMS2Q9UQ26 1411 aa16.32■□□□□ 0.2
SLC13A3-211ENST00000495082 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
SLC13A3-211ENST00000495082 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.31■□□□□ 0.2
SLC13A3-211ENST00000495082 ZNF316A6NFI3 1004 aaPredicted RBP16.3■□□□□ 0.2
SLC13A3-211ENST00000495082 HDGFP51858 240 aaKnown RBP16.3■□□□□ 0.2
SLC13A3-211ENST00000495082 SETD1BQ9UPS6 1966 aaKnown RBP16.3■□□□□ 0.2
SLC13A3-211ENST00000495082 CEP170BQ9Y4F5 1589 aaPredicted RBP16.3■□□□□ 0.2
SLC13A3-211ENST00000495082 LAMC1P11047 1609 aa16.29■□□□□ 0.2
SLC13A3-211ENST00000495082 ZNF142P52746 1687 aaPredicted RBP16.29■□□□□ 0.2
SLC13A3-211ENST00000495082 SLIT1O75093 1534 aa16.29■□□□□ 0.2
SLC13A3-211ENST00000495082 KDM4FA0A1W2PPD8 638 aa16.29■□□□□ 0.2
SLC13A3-211ENST00000495082 EIF4G2P78344 907 aaKnown RBP eCLIP16.29■□□□□ 0.2
SLC13A3-211ENST00000495082 THEMISQ8N1K5 641 aaPredicted RBP16.29■□□□□ 0.2
SLC13A3-211ENST00000495082 CARD11Q9BXL7 1154 aa16.29■□□□□ 0.2
SLC13A3-211ENST00000495082 ARHGAP23Q9P227 1491 aa16.28■□□□□ 0.2
SLC13A3-211ENST00000495082 NBPF1Q3BBV0 1214 aa16.28■□□□□ 0.2
SLC13A3-211ENST00000495082 C14orf93Q9H972 538 aaKnown RBP16.28■□□□□ 0.2
SLC13A3-211ENST00000495082 NUTM2DQ5VT03 806 aaPredicted RBP16.27■□□□□ 0.19
SLC13A3-211ENST00000495082 USP47Q96K76 1375 aa16.26■□□□□ 0.19
SLC13A3-211ENST00000495082 CFAP70Q5T0N1 1121 aa16.26■□□□□ 0.19
SLC13A3-211ENST00000495082 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
SLC13A3-211ENST00000495082 HSPA5P11021 654 aaKnown RBP16.25■□□□□ 0.19
SLC13A3-211ENST00000495082 ADGRB1O14514 1584 aa16.23■□□□□ 0.19
SLC13A3-211ENST00000495082 EID1Q9Y6B2 187 aa16.22■□□□□ 0.19
SLC13A3-211ENST00000495082 SCAF11Q99590 1463 aaKnown RBP16.22■□□□□ 0.19
SLC13A3-211ENST00000495082 PLEKHG1Q9ULL1 1385 aa16.21■□□□□ 0.19
SLC13A3-211ENST00000495082 LTKP29376 864 aa16.21■□□□□ 0.19
SLC13A3-211ENST00000495082 TXNDC2Q86VQ3 553 aa16.21■□□□□ 0.19
SLC13A3-211ENST00000495082 ALKQ9UM73 1620 aa16.2■□□□□ 0.18
SLC13A3-211ENST00000495082 IQGAP1P46940 1657 aa16.19■□□□□ 0.18
SLC13A3-211ENST00000495082 NRXN3Q9Y4C0 1643 aa16.19■□□□□ 0.18
SLC13A3-211ENST00000495082 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
SLC13A3-211ENST00000495082 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
SLC13A3-211ENST00000495082 ASXL1Q8IXJ9 1541 aa16.17■□□□□ 0.18
SLC13A3-211ENST00000495082 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
SLC13A3-211ENST00000495082 ADAMTS13Q76LX8 1427 aa16.16■□□□□ 0.18
SLC13A3-211ENST00000495082 ANKLE2Q86XL3 938 aa16.16■□□□□ 0.18
SLC13A3-211ENST00000495082 SETD1AO15047 1707 aaKnown RBP16.15■□□□□ 0.18
SLC13A3-211ENST00000495082 TMEM132EQ6IEE7 984 aa16.15■□□□□ 0.18
SLC13A3-211ENST00000495082 MED14O60244 1454 aa16.15■□□□□ 0.18
SLC13A3-211ENST00000495082 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
SLC13A3-211ENST00000495082 YTHDC2Q9H6S0 1430 aaKnown RBP16.13■□□□□ 0.17
SLC13A3-211ENST00000495082 DIP2AQ14689 1571 aa16.12■□□□□ 0.17
SLC13A3-211ENST00000495082 TESK2Q96S53 571 aa16.12■□□□□ 0.17
SLC13A3-211ENST00000495082 LRPPRCP42704 1394 aaKnown RBP16.12■□□□□ 0.17
SLC13A3-211ENST00000495082 BCANQ96GW7 911 aa16.12■□□□□ 0.17
SLC13A3-211ENST00000495082 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
SLC13A3-211ENST00000495082 METP08581 1390 aa16.11■□□□□ 0.17
SLC13A3-211ENST00000495082 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
SLC13A3-211ENST00000495082 ABCC11Q96J66 1382 aa16.1■□□□□ 0.17
SLC13A3-211ENST00000495082 SBNO2Q9Y2G9 1366 aa16.1■□□□□ 0.17
SLC13A3-211ENST00000495082 SLC24A1O60721 1099 aa16.1■□□□□ 0.17
SLC13A3-211ENST00000495082 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
SLC13A3-211ENST00000495082 DLC1Q96QB1 1528 aa16.09■□□□□ 0.17
SLC13A3-211ENST00000495082 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.17
SLC13A3-211ENST00000495082 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.17
SLC13A3-211ENST00000495082 TECPR2O15040 1411 aa16.08■□□□□ 0.16
SLC13A3-211ENST00000495082 CCDC7Q96M83 1385 aa16.08■□□□□ 0.16
SLC13A3-211ENST00000495082 CENPJQ9HC77 1338 aaPredicted RBP16.08■□□□□ 0.16
SLC13A3-211ENST00000495082 NPHP4O75161 1426 aaPredicted RBP16.07■□□□□ 0.16
SLC13A3-211ENST00000495082 ARHGEF28Q8N1W1 1705 aaKnown RBP16.07■□□□□ 0.16
SLC13A3-211ENST00000495082 SLC26A8Q96RN1 970 aa16.07■□□□□ 0.16
SLC13A3-211ENST00000495082 PIK3R4Q99570 1358 aa16.07■□□□□ 0.16
SLC13A3-211ENST00000495082 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
SLC13A3-211ENST00000495082 POLR1AO95602 1720 aaPredicted RBP16.06■□□□□ 0.16
SLC13A3-211ENST00000495082 SIRT1Q96EB6 747 aa16.06■□□□□ 0.16
SLC13A3-211ENST00000495082 STK26Q9P289 416 aa16.06■□□□□ 0.16
SLC13A3-211ENST00000495082 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
SLC13A3-211ENST00000495082 TMF1P82094 1093 aa16.05■□□□□ 0.16
SLC13A3-211ENST00000495082 CPS1P31327 1500 aa16.04■□□□□ 0.16
SLC13A3-211ENST00000495082 FAM135BQ49AJ0 1406 aa16.04■□□□□ 0.16
SLC13A3-211ENST00000495082 NCKAP5LQ9HCH0 1330 aa16.04■□□□□ 0.16
SLC13A3-211ENST00000495082 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
SLC13A3-211ENST00000495082 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
SLC13A3-211ENST00000495082 CDCA8Q53HL2 280 aa16.02■□□□□ 0.16
SLC13A3-211ENST00000495082 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.16
SLC13A3-211ENST00000495082 PRAM1Q96QH2 718 aa16.02■□□□□ 0.16
SLC13A3-211ENST00000495082 QRICH2Q9H0J4 1663 aa16.01■□□□□ 0.15
SLC13A3-211ENST00000495082 HSPA2P54652 639 aa16.01■□□□□ 0.15
SLC13A3-211ENST00000495082 PTCH1Q13635 1447 aa16.01■□□□□ 0.15
SLC13A3-211ENST00000495082 POGKQ9P215 609 aa16.01■□□□□ 0.15
SLC13A3-211ENST00000495082 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
SLC13A3-211ENST00000495082 AMOTL2Q9Y2J4 779 aa15.99■□□□□ 0.15
SLC13A3-211ENST00000495082 XRN1Q8IZH2 1706 aaKnown RBP15.99■□□□□ 0.15
SLC13A3-211ENST00000495082 ROBO2Q9HCK4 1378 aa15.99■□□□□ 0.15
SLC13A3-211ENST00000495082 PUS7Q96PZ0 661 aaKnown RBP15.98■□□□□ 0.15
SLC13A3-211ENST00000495082 WAPLQ7Z5K2 1190 aa15.97■□□□□ 0.15
SLC13A3-211ENST00000495082 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
SLC13A3-211ENST00000495082 EVC2Q86UK5 1308 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms