RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 CHD2O14647 1828 aaKnown RBP23.94■■□□□ 1.42
CHMP2B-205ENST00000494980 LRP5O75197 1615 aa23.94■■□□□ 1.42
CHMP2B-205ENST00000494980 C8orf37Q96NL8 207 aa23.93■■□□□ 1.42
CHMP2B-205ENST00000494980 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.92■■□□□ 1.42
CHMP2B-205ENST00000494980 MAST1Q9Y2H9 1570 aa23.91■■□□□ 1.42
CHMP2B-205ENST00000494980 STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
CHMP2B-205ENST00000494980 NGLY1Q96IV0 654 aa23.87■■□□□ 1.41
CHMP2B-205ENST00000494980 ARHGEF5Q12774 1597 aa23.86■■□□□ 1.41
CHMP2B-205ENST00000494980 C14orf37Q86TY3 774 aa23.86■■□□□ 1.41
CHMP2B-205ENST00000494980 ARHGAP31Q2M1Z3 1444 aa23.85■■□□□ 1.41
CHMP2B-205ENST00000494980 EHBP1L1Q8N3D4 1523 aa23.85■■□□□ 1.41
CHMP2B-205ENST00000494980 RSPH4AQ5TD94 716 aa23.84■■□□□ 1.41
CHMP2B-205ENST00000494980 BCANQ96GW7 911 aa23.84■■□□□ 1.41
CHMP2B-205ENST00000494980 CADPS2Q86UW7 1296 aa23.82■■□□□ 1.4
CHMP2B-205ENST00000494980 NCOA3Q9Y6Q9 1424 aa23.82■■□□□ 1.4
CHMP2B-205ENST00000494980 BRINP3Q76B58 766 aa23.81■■□□□ 1.4
CHMP2B-205ENST00000494980 SETD5Q9C0A6 1442 aa23.81■■□□□ 1.4
CHMP2B-205ENST00000494980 TSPY4P0CV99 314 aa23.8■■□□□ 1.4
CHMP2B-205ENST00000494980 TSPY10P0CW01 314 aa23.8■■□□□ 1.4
CHMP2B-205ENST00000494980 ATF3P18847 181 aa23.8■■□□□ 1.4
CHMP2B-205ENST00000494980 CEP162Q5TB80 1403 aa23.8■■□□□ 1.4
CHMP2B-205ENST00000494980 NHSL1Q5SYE7 1610 aa23.8■■□□□ 1.4
CHMP2B-205ENST00000494980 ADGRB3O60242 1522 aa23.79■■□□□ 1.4
CHMP2B-205ENST00000494980 ASXL1Q8IXJ9 1541 aa23.79■■□□□ 1.4
CHMP2B-205ENST00000494980 CCDC125Q86Z20 511 aa23.78■■□□□ 1.4
CHMP2B-205ENST00000494980 IDI1Q13907 227 aa23.75■■□□□ 1.39
CHMP2B-205ENST00000494980 C19orf44Q9H6X5 657 aa23.75■■□□□ 1.39
CHMP2B-205ENST00000494980 PNPLA6Q8IY17 1366 aa23.74■■□□□ 1.39
CHMP2B-205ENST00000494980 ADAMTS2O95450 1211 aa23.72■■□□□ 1.39
CHMP2B-205ENST00000494980 MYO5BQ9ULV0 1848 aa23.7■■□□□ 1.39
CHMP2B-205ENST00000494980 LRRC59Q96AG4 307 aaKnown RBP23.7■■□□□ 1.38
CHMP2B-205ENST00000494980 PLEKHG1Q9ULL1 1385 aa23.69■■□□□ 1.38
CHMP2B-205ENST00000494980 USP21Q9UK80 565 aa23.69■■□□□ 1.38
CHMP2B-205ENST00000494980 TRPC5Q9UL62 973 aaPredicted RBP23.69■■□□□ 1.38
CHMP2B-205ENST00000494980 DUOX2Q9NRD8 1548 aa23.68■■□□□ 1.38
CHMP2B-205ENST00000494980 ATRNO75882 1429 aa23.67■■□□□ 1.38
CHMP2B-205ENST00000494980 ZFYVE9O95405 1425 aa23.66■■□□□ 1.38
CHMP2B-205ENST00000494980 BLMP54132 1417 aaPredicted RBP23.64■■□□□ 1.37
CHMP2B-205ENST00000494980 DCCP43146 1447 aa23.62■■□□□ 1.37
CHMP2B-205ENST00000494980 PPP1R15AO75807 674 aaPredicted RBP23.62■■□□□ 1.37
CHMP2B-205ENST00000494980 DEFB132Q7Z7B7 95 aa23.62■■□□□ 1.37
CHMP2B-205ENST00000494980 DDX17Q92841 729 aaKnown RBP23.62■■□□□ 1.37
CHMP2B-205ENST00000494980 MST1RQ04912 1400 aa23.61■■□□□ 1.37
CHMP2B-205ENST00000494980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.61■■□□□ 1.37
CHMP2B-205ENST00000494980 TBX22Q9Y458 520 aa23.6■■□□□ 1.37
CHMP2B-205ENST00000494980 GCC2Q8IWJ2 1684 aa23.59■■□□□ 1.37
CHMP2B-205ENST00000494980 RIMS2Q9UQ26 1411 aa23.59■■□□□ 1.37
CHMP2B-205ENST00000494980 YY1P25490 414 aa23.58■■□□□ 1.37
CHMP2B-205ENST00000494980 NOS1P29475 1434 aa23.58■■□□□ 1.36
CHMP2B-205ENST00000494980 PSDA5PKW4 1024 aaPredicted RBP23.57■■□□□ 1.36
CHMP2B-205ENST00000494980 FNBP4Q8N3X1 1017 aaPredicted RBP23.56■■□□□ 1.36
CHMP2B-205ENST00000494980 ADAMTS13Q76LX8 1427 aa23.56■■□□□ 1.36
CHMP2B-205ENST00000494980 KANK1Q14678 1352 aa23.55■■□□□ 1.36
CHMP2B-205ENST00000494980 LMTK2Q8IWU2 1503 aa23.55■■□□□ 1.36
CHMP2B-205ENST00000494980 HRCP23327 699 aa23.55■■□□□ 1.36
CHMP2B-205ENST00000494980 ERBINQ96RT1 1412 aa23.55■■□□□ 1.36
CHMP2B-205ENST00000494980 BCL9LQ86UU0 1499 aa23.55■■□□□ 1.36
CHMP2B-205ENST00000494980 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
CHMP2B-205ENST00000494980 PTCH1Q13635 1447 aa23.53■■□□□ 1.36
CHMP2B-205ENST00000494980 IFFO2Q5TF58 517 aa23.53■■□□□ 1.36
CHMP2B-205ENST00000494980 BRWD3Q6RI45 1802 aa23.53■■□□□ 1.36
CHMP2B-205ENST00000494980 PIK3R4Q99570 1358 aa23.52■■□□□ 1.36
CHMP2B-205ENST00000494980 TRPM2O94759 1503 aa23.52■■□□□ 1.36
CHMP2B-205ENST00000494980 UNC13BO14795 1591 aa23.51■■□□□ 1.35
CHMP2B-205ENST00000494980 SLC52A1Q9NWF4 448 aa23.5■■□□□ 1.35
CHMP2B-205ENST00000494980 TMEM131LA2VDJ0 1609 aa23.5■■□□□ 1.35
CHMP2B-205ENST00000494980 SF3B2Q13435 895 aaKnown RBP23.49■■□□□ 1.35
CHMP2B-205ENST00000494980 PTPRUQ92729 1446 aa23.49■■□□□ 1.35
CHMP2B-205ENST00000494980 MARF1Q9Y4F3 1742 aaKnown RBP23.47■■□□□ 1.35
CHMP2B-205ENST00000494980 HDGFP51858 240 aaKnown RBP23.47■■□□□ 1.35
CHMP2B-205ENST00000494980 AMOTL2Q9Y2J4 779 aa23.47■■□□□ 1.35
CHMP2B-205ENST00000494980 LAMC1P11047 1609 aa23.47■■□□□ 1.35
CHMP2B-205ENST00000494980 SPHKAPQ2M3C7 1700 aa23.47■■□□□ 1.35
CHMP2B-205ENST00000494980 XRN1Q8IZH2 1706 aaKnown RBP23.46■■□□□ 1.35
CHMP2B-205ENST00000494980 COL22A1Q8NFW1 1626 aaPredicted RBP23.45■■□□□ 1.34
CHMP2B-205ENST00000494980 GJD4Q96KN9 370 aaPredicted RBP23.45■■□□□ 1.34
CHMP2B-205ENST00000494980 CROCC2H7BZ55 1655 aa23.44■■□□□ 1.34
CHMP2B-205ENST00000494980 GLI3P10071 1580 aa23.44■■□□□ 1.34
CHMP2B-205ENST00000494980 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
CHMP2B-205ENST00000494980 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
CHMP2B-205ENST00000494980 RRP7BPQ9NSQ0 103 aa23.41■■□□□ 1.34
CHMP2B-205ENST00000494980 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.4■■□□□ 1.34
CHMP2B-205ENST00000494980 RALGAPBQ86X10 1494 aa23.38■■□□□ 1.33
CHMP2B-205ENST00000494980 ADGRL3Q9HAR2 1447 aa23.38■■□□□ 1.33
CHMP2B-205ENST00000494980 MYOM2P54296 1465 aa23.37■■□□□ 1.33
CHMP2B-205ENST00000494980 MYOM3Q5VTT5 1437 aa23.37■■□□□ 1.33
CHMP2B-205ENST00000494980 SOS2Q07890 1332 aaPredicted RBP23.36■■□□□ 1.33
CHMP2B-205ENST00000494980 C1orf167Q5SNV9 1468 aa23.34■■□□□ 1.33
CHMP2B-205ENST00000494980 RPRD2Q5VT52 1461 aaKnown RBP23.34■■□□□ 1.33
CHMP2B-205ENST00000494980 CHGAP10645 457 aaKnown RBP23.32■■□□□ 1.32
CHMP2B-205ENST00000494980 NRXN3Q9Y4C0 1643 aa23.31■■□□□ 1.32
CHMP2B-205ENST00000494980 BAG6P46379 1132 aa23.31■■□□□ 1.32
CHMP2B-205ENST00000494980 R3HDM1Q15032 1099 aaKnown RBP23.31■■□□□ 1.32
CHMP2B-205ENST00000494980 ABCC5O15440 1437 aa23.27■■□□□ 1.32
CHMP2B-205ENST00000494980 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
CHMP2B-205ENST00000494980 SEPT12Q8IYM1 358 aa23.27■■□□□ 1.32
CHMP2B-205ENST00000494980 UNC5CLQ8IV45 518 aa23.25■■□□□ 1.31
CHMP2B-205ENST00000494980 ORAI2Q96SN7 254 aa23.25■■□□□ 1.31
CHMP2B-205ENST00000494980 SLIT2O94813 1529 aa23.23■■□□□ 1.31
CHMP2B-205ENST00000494980 CEP350Q5VT06 3117 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms