RNA–Protein interactions for RNA: ENST00000494444.2

PTP4A2-207, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 678 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-207ENST00000494444 PXYLP1Q8TE99 480 aa9.71□□□□□ -0.86
PTP4A2-207ENST00000494444 GFRA3O60609 400 aa9.7□□□□□ -0.86
PTP4A2-207ENST00000494444 OATP04181 439 aa9.7□□□□□ -0.86
PTP4A2-207ENST00000494444 APLP1P51693 650 aa9.7□□□□□ -0.86
PTP4A2-207ENST00000494444 SLF2Q8IX21 1173 aa9.7□□□□□ -0.86
PTP4A2-207ENST00000494444 TMEM134Q9H6X4 195 aa9.7□□□□□ -0.86
PTP4A2-207ENST00000494444 METTL3Q86U44 580 aaKnown RBP9.69□□□□□ -0.86
PTP4A2-207ENST00000494444 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.68□□□□□ -0.86
PTP4A2-207ENST00000494444 NLRP7Q8WX94 980 aa9.67□□□□□ -0.86
PTP4A2-207ENST00000494444 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.66□□□□□ -0.86
PTP4A2-207ENST00000494444 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
PTP4A2-207ENST00000494444 PHOX2BQ99453 314 aa9.66□□□□□ -0.86
PTP4A2-207ENST00000494444 TJAP1Q5JTD0 557 aa9.65□□□□□ -0.86
PTP4A2-207ENST00000494444 MTRQ99707 1265 aa9.64□□□□□ -0.87
PTP4A2-207ENST00000494444 SLC10A3P09131 477 aa9.63□□□□□ -0.87
PTP4A2-207ENST00000494444 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
PTP4A2-207ENST00000494444 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
PTP4A2-207ENST00000494444 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
PTP4A2-207ENST00000494444 COPS2P61201 443 aa9.61□□□□□ -0.87
PTP4A2-207ENST00000494444 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
PTP4A2-207ENST00000494444 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
PTP4A2-207ENST00000494444 IL21Q9HBE4 155 aa9.6□□□□□ -0.87
PTP4A2-207ENST00000494444 IRF6O14896 467 aa9.59□□□□□ -0.87
PTP4A2-207ENST00000494444 MAP2K5Q13163 448 aa9.59□□□□□ -0.87
PTP4A2-207ENST00000494444 CFHP08603 1231 aa9.58□□□□□ -0.88
PTP4A2-207ENST00000494444 DAXXQ9UER7 740 aaPredicted RBP9.58□□□□□ -0.88
PTP4A2-207ENST00000494444 NKX2-3Q8TAU0 364 aa9.57□□□□□ -0.88
PTP4A2-207ENST00000494444 PCDHB3Q9Y5E6 796 aa9.57□□□□□ -0.88
PTP4A2-207ENST00000494444 MINK1Q8N4C8 1332 aaPredicted RBP9.56□□□□□ -0.88
PTP4A2-207ENST00000494444 DDX11L8A8MPP1 907 aa9.56□□□□□ -0.88
PTP4A2-207ENST00000494444 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
PTP4A2-207ENST00000494444 PRR14Q9BWN1 585 aa9.56□□□□□ -0.88
PTP4A2-207ENST00000494444 ACTN4O43707 911 aaKnown RBP9.55□□□□□ -0.88
PTP4A2-207ENST00000494444 KMT5BQ4FZB7 885 aa9.55□□□□□ -0.88
PTP4A2-207ENST00000494444 RDH13Q8NBN7 331 aa9.54□□□□□ -0.88
PTP4A2-207ENST00000494444 ZC3H15Q8WU90 426 aaKnown RBP9.54□□□□□ -0.88
PTP4A2-207ENST00000494444 CCDC102AQ96A19 550 aa9.54□□□□□ -0.88
PTP4A2-207ENST00000494444 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
PTP4A2-207ENST00000494444 RSPH4AQ5TD94 716 aa9.53□□□□□ -0.88
PTP4A2-207ENST00000494444 ZNF787Q6DD87 383 aa9.53□□□□□ -0.88
PTP4A2-207ENST00000494444 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
PTP4A2-207ENST00000494444 ZPR1O75312 459 aa9.52□□□□□ -0.89
PTP4A2-207ENST00000494444 KRI1Q8N9T8 703 aaKnown RBP9.52□□□□□ -0.89
PTP4A2-207ENST00000494444 SLC24A1O60721 1099 aa9.51□□□□□ -0.89
PTP4A2-207ENST00000494444 MDM2Q00987 491 aaPredicted RBP9.51□□□□□ -0.89
PTP4A2-207ENST00000494444 PUS10Q3MIT2 529 aaKnown RBP9.51□□□□□ -0.89
PTP4A2-207ENST00000494444 ZMYND10O75800 440 aa9.5□□□□□ -0.89
PTP4A2-207ENST00000494444 BARGINQ6ZT62 677 aa9.5□□□□□ -0.89
PTP4A2-207ENST00000494444 TLL1O43897 1013 aa9.49□□□□□ -0.89
PTP4A2-207ENST00000494444 SULF1Q8IWU6 871 aa9.49□□□□□ -0.89
PTP4A2-207ENST00000494444 GCGRP47871 477 aa9.48□□□□□ -0.89
PTP4A2-207ENST00000494444 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.48□□□□□ -0.89
PTP4A2-207ENST00000494444 FUT2Q10981 343 aa9.47□□□□□ -0.89
PTP4A2-207ENST00000494444 SCUBE3Q8IX30 993 aa9.47□□□□□ -0.89
PTP4A2-207ENST00000494444 ZNF775Q96BV0 537 aaPredicted RBP9.47□□□□□ -0.89
PTP4A2-207ENST00000494444 PDZRN3Q9UPQ7 1066 aa9.47□□□□□ -0.89
PTP4A2-207ENST00000494444 NR1I2O75469 434 aa9.44□□□□□ -0.9
PTP4A2-207ENST00000494444 CD46P15529 392 aa9.44□□□□□ -0.9
PTP4A2-207ENST00000494444 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
PTP4A2-207ENST00000494444 MORN1Q5T089 497 aa9.43□□□□□ -0.9
PTP4A2-207ENST00000494444 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
PTP4A2-207ENST00000494444 CLCN1P35523 988 aa9.42□□□□□ -0.9
PTP4A2-207ENST00000494444 ATP6V1AP38606 617 aa9.42□□□□□ -0.9
PTP4A2-207ENST00000494444 TMUB1Q9BVT8 246 aa9.42□□□□□ -0.9
PTP4A2-207ENST00000494444 SLC27A5Q9Y2P5 690 aa9.41□□□□□ -0.9
PTP4A2-207ENST00000494444 PPEF1O14829 653 aaPredicted RBP9.4□□□□□ -0.9
PTP4A2-207ENST00000494444 S1PR4O95977 384 aa9.4□□□□□ -0.9
PTP4A2-207ENST00000494444 GGCXP38435 758 aa9.4□□□□□ -0.9
PTP4A2-207ENST00000494444 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.9
PTP4A2-207ENST00000494444 RNF223E7ERA6 249 aa9.39□□□□□ -0.91
PTP4A2-207ENST00000494444 ADH1BP00325 375 aa9.39□□□□□ -0.91
PTP4A2-207ENST00000494444 SPSB2Q99619 263 aa9.39□□□□□ -0.91
PTP4A2-207ENST00000494444 KDM4AO75164 1064 aa9.38□□□□□ -0.91
PTP4A2-207ENST00000494444 SSTR3P32745 418 aaPredicted RBP9.37□□□□□ -0.91
PTP4A2-207ENST00000494444 TTLL12Q14166 644 aaPredicted RBP9.37□□□□□ -0.91
PTP4A2-207ENST00000494444 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
PTP4A2-207ENST00000494444 SLC6A16Q9GZN6 736 aa9.37□□□□□ -0.91
PTP4A2-207ENST00000494444 TRIM66O15016 1216 aa9.36□□□□□ -0.91
PTP4A2-207ENST00000494444 AMHR2Q16671 573 aa9.36□□□□□ -0.91
PTP4A2-207ENST00000494444 HLA-CQ95604 372 aa9.36□□□□□ -0.91
PTP4A2-207ENST00000494444 BCANQ96GW7 911 aa9.36□□□□□ -0.91
PTP4A2-207ENST00000494444 GRIPAP1Q4V328 841 aa9.35□□□□□ -0.91
PTP4A2-207ENST00000494444 AK7Q96M32 723 aa9.35□□□□□ -0.91
PTP4A2-207ENST00000494444 FMNL1O95466 1100 aaPredicted RBP9.34□□□□□ -0.91
PTP4A2-207ENST00000494444 BRICD5Q6PL45 260 aa9.34□□□□□ -0.91
PTP4A2-207ENST00000494444 RNF19BQ6ZMZ0 732 aa9.34□□□□□ -0.91
PTP4A2-207ENST00000494444 FAM160A2Q8N612 972 aaPredicted RBP9.34□□□□□ -0.91
PTP4A2-207ENST00000494444 EMID1Q96A84 441 aaPredicted RBP9.34□□□□□ -0.91
PTP4A2-207ENST00000494444 SLC24A3Q9HC58 644 aa9.34□□□□□ -0.91
PTP4A2-207ENST00000494444 GIGYF2Q6Y7W6 1299 aaKnown RBP9.33□□□□□ -0.92
PTP4A2-207ENST00000494444 GUCA2AQ02747 115 aa9.32□□□□□ -0.92
PTP4A2-207ENST00000494444 TRIM67Q6ZTA4 783 aa9.32□□□□□ -0.92
PTP4A2-207ENST00000494444 ANKLE1Q8NAG6 615 aa9.32□□□□□ -0.92
PTP4A2-207ENST00000494444 HOXA2O43364 376 aa9.31□□□□□ -0.92
PTP4A2-207ENST00000494444 USP46P62068 366 aa9.31□□□□□ -0.92
PTP4A2-207ENST00000494444 NUTM1Q86Y26 1132 aa9.31□□□□□ -0.92
PTP4A2-207ENST00000494444 PARP9Q8IXQ6 854 aa9.31□□□□□ -0.92
PTP4A2-207ENST00000494444 PRDM9Q9NQV7 894 aa9.31□□□□□ -0.92
PTP4A2-207ENST00000494444 SALL2Q9Y467 1007 aaPredicted RBP9.31□□□□□ -0.92
PTP4A2-207ENST00000494444 SLC19A1P41440 591 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms