RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 ADGRF5Q8IZF2 1346 aa29.13■■■□□ 2.25
KPNA1-210ENST00000494339 ADAMTSL3P82987 1691 aa29.13■■■□□ 2.25
KPNA1-210ENST00000494339 CARD11Q9BXL7 1154 aa29.12■■■□□ 2.25
KPNA1-210ENST00000494339 NBPF1Q3BBV0 1214 aa29.12■■■□□ 2.25
KPNA1-210ENST00000494339 NEXMIFQ5QGS0 1516 aa29.11■■■□□ 2.25
KPNA1-210ENST00000494339 NUTM2DQ5VT03 806 aaPredicted RBP29.09■■■□□ 2.25
KPNA1-210ENST00000494339 USP47Q96K76 1375 aa29.07■■■□□ 2.24
KPNA1-210ENST00000494339 A2ML1A8K2U0 1454 aa29.07■■■□□ 2.24
KPNA1-210ENST00000494339 NRXN1Q9ULB1 1477 aa29.07■■■□□ 2.24
KPNA1-210ENST00000494339 GPRASP1Q5JY77 1395 aa29.04■■■□□ 2.24
KPNA1-210ENST00000494339 DIEXFQ68CQ4 756 aaKnown RBP29.04■■■□□ 2.24
KPNA1-210ENST00000494339 VGFO15240 615 aaPredicted RBP29.02■■■□□ 2.24
KPNA1-210ENST00000494339 KIAA1210Q9ULL0 1709 aa29.01■■■□□ 2.23
KPNA1-210ENST00000494339 KDM4FA0A1W2PPD8 638 aa29.01■■■□□ 2.23
KPNA1-210ENST00000494339 CFAP70Q5T0N1 1121 aa29.01■■■□□ 2.23
KPNA1-210ENST00000494339 NLRP1Q9C000 1473 aa29.01■■■□□ 2.23
KPNA1-210ENST00000494339 PIK3C2GO75747 1445 aa29.01■■■□□ 2.23
KPNA1-210ENST00000494339 LAMC1P11047 1609 aa29■■■□□ 2.23
KPNA1-210ENST00000494339 UBR1Q8IWV7 1749 aa28.99■■■□□ 2.23
KPNA1-210ENST00000494339 KDM5AP29375 1690 aaKnown RBP28.97■■■□□ 2.23
KPNA1-210ENST00000494339 ZFYVE9O95405 1425 aa28.97■■■□□ 2.23
KPNA1-210ENST00000494339 RIMS2Q9UQ26 1411 aa28.96■■■□□ 2.23
KPNA1-210ENST00000494339 SENP3Q9H4L4 574 aaPredicted RBP28.95■■■□□ 2.23
KPNA1-210ENST00000494339 MYO3AQ8NEV4 1616 aa28.94■■■□□ 2.22
KPNA1-210ENST00000494339 C14orf93Q9H972 538 aaKnown RBP28.92■■■□□ 2.22
KPNA1-210ENST00000494339 ST20-MTHFSA0A0A6YYL1 179 aa28.92■■■□□ 2.22
KPNA1-210ENST00000494339 IQGAP1P46940 1657 aa28.89■■■□□ 2.22
KPNA1-210ENST00000494339 PTPRMP28827 1452 aa28.88■■■□□ 2.21
KPNA1-210ENST00000494339 TMEM2Q9UHN6 1383 aa28.88■■■□□ 2.21
KPNA1-210ENST00000494339 SCAF11Q99590 1463 aaKnown RBP28.87■■■□□ 2.21
KPNA1-210ENST00000494339 C11orf95C9JLR9 678 aaPredicted RBP28.86■■■□□ 2.21
KPNA1-210ENST00000494339 SETBP1Q9Y6X0 1596 aa28.86■■■□□ 2.21
KPNA1-210ENST00000494339 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.85■■■□□ 2.21
KPNA1-210ENST00000494339 WASHC2AQ641Q2 1341 aa28.85■■■□□ 2.21
KPNA1-210ENST00000494339 TMEM132EQ6IEE7 984 aa28.84■■■□□ 2.21
KPNA1-210ENST00000494339 SETD1BQ9UPS6 1966 aaKnown RBP28.84■■■□□ 2.21
KPNA1-210ENST00000494339 ADGRB1O14514 1584 aa28.84■■■□□ 2.21
KPNA1-210ENST00000494339 CEP170BQ9Y4F5 1589 aaPredicted RBP28.84■■■□□ 2.21
KPNA1-210ENST00000494339 HDGFP51858 240 aaKnown RBP28.83■■■□□ 2.21
KPNA1-210ENST00000494339 DDX10Q13206 875 aaKnown RBP28.83■■■□□ 2.21
KPNA1-210ENST00000494339 POLR1AO95602 1720 aaPredicted RBP28.81■■■□□ 2.2
KPNA1-210ENST00000494339 THEMISQ8N1K5 641 aaPredicted RBP28.8■■■□□ 2.2
KPNA1-210ENST00000494339 ALKQ9UM73 1620 aa28.79■■■□□ 2.2
KPNA1-210ENST00000494339 CCDC7Q96M83 1385 aa28.79■■■□□ 2.2
KPNA1-210ENST00000494339 KIF7Q2M1P5 1343 aa28.78■■■□□ 2.2
KPNA1-210ENST00000494339 EIF3AQ14152 1382 aaKnown RBP28.77■■■□□ 2.2
KPNA1-210ENST00000494339 SLIT1O75093 1534 aa28.77■■■□□ 2.2
KPNA1-210ENST00000494339 LTKP29376 864 aa28.77■■■□□ 2.2
KPNA1-210ENST00000494339 TXNDC2Q86VQ3 553 aa28.76■■■□□ 2.19
KPNA1-210ENST00000494339 ZNF142P52746 1687 aaPredicted RBP28.76■■■□□ 2.19
KPNA1-210ENST00000494339 ASXL1Q8IXJ9 1541 aa28.76■■■□□ 2.19
KPNA1-210ENST00000494339 ARHGAP23Q9P227 1491 aa28.75■■■□□ 2.19
KPNA1-210ENST00000494339 TESK2Q96S53 571 aa28.75■■■□□ 2.19
KPNA1-210ENST00000494339 TRAK1Q9UPV9 953 aa28.75■■■□□ 2.19
KPNA1-210ENST00000494339 NRXN3Q9Y4C0 1643 aa28.75■■■□□ 2.19
KPNA1-210ENST00000494339 EID1Q9Y6B2 187 aa28.74■■■□□ 2.19
KPNA1-210ENST00000494339 BCANQ96GW7 911 aa28.73■■■□□ 2.19
KPNA1-210ENST00000494339 POLR3GLQ9BT43 218 aa28.73■■■□□ 2.19
KPNA1-210ENST00000494339 SETD1AO15047 1707 aaKnown RBP28.71■■■□□ 2.19
KPNA1-210ENST00000494339 STK26Q9P289 416 aa28.69■■■□□ 2.18
KPNA1-210ENST00000494339 PLEKHG1Q9ULL1 1385 aa28.68■■■□□ 2.18
KPNA1-210ENST00000494339 DISP3Q9P2K9 1392 aa28.67■■■□□ 2.18
KPNA1-210ENST00000494339 YTHDC2Q9H6S0 1430 aaKnown RBP28.66■■■□□ 2.18
KPNA1-210ENST00000494339 ARHGEF28Q8N1W1 1705 aaKnown RBP28.66■■■□□ 2.18
KPNA1-210ENST00000494339 TMF1P82094 1093 aa28.65■■■□□ 2.18
KPNA1-210ENST00000494339 CENPJQ9HC77 1338 aaPredicted RBP28.64■■■□□ 2.18
KPNA1-210ENST00000494339 ADAMTS13Q76LX8 1427 aa28.63■■■□□ 2.17
KPNA1-210ENST00000494339 METP08581 1390 aa28.63■■■□□ 2.17
KPNA1-210ENST00000494339 QRICH2Q9H0J4 1663 aa28.61■■■□□ 2.17
KPNA1-210ENST00000494339 MIER1Q8N108 512 aa28.59■■■□□ 2.17
KPNA1-210ENST00000494339 SLC26A8Q96RN1 970 aa28.59■■■□□ 2.17
KPNA1-210ENST00000494339 ANKLE2Q86XL3 938 aa28.57■■■□□ 2.16
KPNA1-210ENST00000494339 LRPPRCP42704 1394 aaKnown RBP28.57■■■□□ 2.16
KPNA1-210ENST00000494339 SBNO2Q9Y2G9 1366 aa28.56■■■□□ 2.16
KPNA1-210ENST00000494339 SAFB2Q14151 953 aaKnown RBP eCLIP28.55■■■□□ 2.16
KPNA1-210ENST00000494339 MED14O60244 1454 aa28.55■■■□□ 2.16
KPNA1-210ENST00000494339 PRAM1Q96QH2 718 aa28.54■■■□□ 2.16
KPNA1-210ENST00000494339 SLC24A1O60721 1099 aa28.53■■■□□ 2.16
KPNA1-210ENST00000494339 ABCC11Q96J66 1382 aa28.52■■■□□ 2.16
KPNA1-210ENST00000494339 POGKQ9P215 609 aa28.52■■■□□ 2.16
KPNA1-210ENST00000494339 CDCA8Q53HL2 280 aa28.51■■■□□ 2.15
KPNA1-210ENST00000494339 DLC1Q96QB1 1528 aa28.5■■■□□ 2.15
KPNA1-210ENST00000494339 TBX22Q9Y458 520 aa28.5■■■□□ 2.15
KPNA1-210ENST00000494339 DIP2AQ14689 1571 aa28.49■■■□□ 2.15
KPNA1-210ENST00000494339 KNDC1Q76NI1 1749 aa28.48■■■□□ 2.15
KPNA1-210ENST00000494339 WAPLQ7Z5K2 1190 aa28.47■■■□□ 2.15
KPNA1-210ENST00000494339 PLEKHH1Q9ULM0 1364 aa28.45■■■□□ 2.14
KPNA1-210ENST00000494339 TECPR2O15040 1411 aa28.45■■■□□ 2.14
KPNA1-210ENST00000494339 MINK1Q8N4C8 1332 aaPredicted RBP28.44■■■□□ 2.14
KPNA1-210ENST00000494339 PTPRUQ92729 1446 aa28.44■■■□□ 2.14
KPNA1-210ENST00000494339 NCKAP5LQ9HCH0 1330 aa28.44■■■□□ 2.14
KPNA1-210ENST00000494339 HSPA2P54652 639 aa28.43■■■□□ 2.14
KPNA1-210ENST00000494339 CPS1P31327 1500 aa28.43■■■□□ 2.14
KPNA1-210ENST00000494339 TULP4Q9NRJ4 1543 aa28.42■■■□□ 2.14
KPNA1-210ENST00000494339 ANP32CO43423 234 aa28.42■■■□□ 2.14
KPNA1-210ENST00000494339 NPHP4O75161 1426 aaPredicted RBP28.42■■■□□ 2.14
KPNA1-210ENST00000494339 EVC2Q86UK5 1308 aa28.41■■■□□ 2.14
KPNA1-210ENST00000494339 LMTK3Q96Q04 1460 aa28.4■■■□□ 2.14
KPNA1-210ENST00000494339 AMOTL2Q9Y2J4 779 aa28.4■■■□□ 2.14
KPNA1-210ENST00000494339 ROBO2Q9HCK4 1378 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms