RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 DAXXQ9UER7 740 aaPredicted RBP16.28■□□□□ 0.2
HMGB3P14-201ENST00000494195 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
HMGB3P14-201ENST00000494195 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
HMGB3P14-201ENST00000494195 LRCH3Q96II8 777 aa16.26■□□□□ 0.19
HMGB3P14-201ENST00000494195 TMUB1Q9BVT8 246 aa16.25■□□□□ 0.19
HMGB3P14-201ENST00000494195 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.25■□□□□ 0.19
HMGB3P14-201ENST00000494195 PARP9Q8IXQ6 854 aa16.24■□□□□ 0.19
HMGB3P14-201ENST00000494195 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
HMGB3P14-201ENST00000494195 KCTD12Q96CX2 325 aaKnown RBP16.23■□□□□ 0.19
HMGB3P14-201ENST00000494195 SOWAHBA6NEL2 793 aa16.22■□□□□ 0.19
HMGB3P14-201ENST00000494195 SLF2Q8IX21 1173 aa16.22■□□□□ 0.19
HMGB3P14-201ENST00000494195 REPIN1Q9BWE0 567 aaKnown RBP16.22■□□□□ 0.19
HMGB3P14-201ENST00000494195 BCAMP50895 628 aa16.2■□□□□ 0.18
HMGB3P14-201ENST00000494195 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
HMGB3P14-201ENST00000494195 THSD4Q6ZMP0 1018 aa16.19■□□□□ 0.18
HMGB3P14-201ENST00000494195 SULF1Q8IWU6 871 aa16.18■□□□□ 0.18
HMGB3P14-201ENST00000494195 RNF166Q96A37 237 aaPredicted RBP16.18■□□□□ 0.18
HMGB3P14-201ENST00000494195 RNF40O75150 1001 aa16.17■□□□□ 0.18
HMGB3P14-201ENST00000494195 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
HMGB3P14-201ENST00000494195 DDX11L8A8MPP1 907 aa16.15■□□□□ 0.18
HMGB3P14-201ENST00000494195 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
HMGB3P14-201ENST00000494195 NECTIN2Q92692 538 aa16.15■□□□□ 0.18
HMGB3P14-201ENST00000494195 HPS5Q9UPZ3 1129 aa16.15■□□□□ 0.18
HMGB3P14-201ENST00000494195 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
HMGB3P14-201ENST00000494195 MMRN1Q13201 1228 aa16.14■□□□□ 0.17
HMGB3P14-201ENST00000494195 RSPH4AQ5TD94 716 aa16.14■□□□□ 0.17
HMGB3P14-201ENST00000494195 TSR3Q9UJK0 312 aaKnown RBP16.14■□□□□ 0.17
HMGB3P14-201ENST00000494195 GPBP1L1Q9HC44 474 aaPredicted RBP16.13■□□□□ 0.17
HMGB3P14-201ENST00000494195 SSTR3P32745 418 aaPredicted RBP16.12■□□□□ 0.17
HMGB3P14-201ENST00000494195 PPP4CP60510 307 aa16.11■□□□□ 0.17
HMGB3P14-201ENST00000494195 RDH13Q8NBN7 331 aa16.11■□□□□ 0.17
HMGB3P14-201ENST00000494195 KDM4CQ9H3R0 1056 aa16.11■□□□□ 0.17
HMGB3P14-201ENST00000494195 SLC10A3P09131 477 aa16.1■□□□□ 0.17
HMGB3P14-201ENST00000494195 CD46P15529 392 aa16.09■□□□□ 0.17
HMGB3P14-201ENST00000494195 MS4A1P11836 297 aa16.08■□□□□ 0.16
HMGB3P14-201ENST00000494195 WBP1LQ9NX94 342 aa16.07■□□□□ 0.16
HMGB3P14-201ENST00000494195 PTPN5P54829 565 aa16.06■□□□□ 0.16
HMGB3P14-201ENST00000494195 CFHP08603 1231 aa16.04■□□□□ 0.16
HMGB3P14-201ENST00000494195 NYAP1Q6ZVC0 841 aa16.03■□□□□ 0.16
HMGB3P14-201ENST00000494195 KMT5BQ4FZB7 885 aa16.02■□□□□ 0.16
HMGB3P14-201ENST00000494195 PRR14Q9BWN1 585 aa16.02■□□□□ 0.16
HMGB3P14-201ENST00000494195 HCSTQ9UBK5 93 aa16.02■□□□□ 0.16
HMGB3P14-201ENST00000494195 GCGRP47871 477 aa16.01■□□□□ 0.15
HMGB3P14-201ENST00000494195 BEGAINQ9BUH8 593 aa16.01■□□□□ 0.15
HMGB3P14-201ENST00000494195 APLP1P51693 650 aa15.98■□□□□ 0.15
HMGB3P14-201ENST00000494195 DDRGK1Q96HY6 314 aa15.97■□□□□ 0.15
HMGB3P14-201ENST00000494195 FAM117AQ9C073 453 aa15.97■□□□□ 0.15
HMGB3P14-201ENST00000494195 ACTN4O43707 911 aaKnown RBP15.95■□□□□ 0.14
HMGB3P14-201ENST00000494195 KDM4AO75164 1064 aa15.93■□□□□ 0.14
HMGB3P14-201ENST00000494195 NUTM1Q86Y26 1132 aa15.93■□□□□ 0.14
HMGB3P14-201ENST00000494195 USP46P62068 366 aa15.91■□□□□ 0.14
HMGB3P14-201ENST00000494195 DIXDC1Q155Q3 683 aa15.91■□□□□ 0.14
HMGB3P14-201ENST00000494195 SPIRE2Q8WWL2 714 aa15.9■□□□□ 0.14
HMGB3P14-201ENST00000494195 FUT2Q10981 343 aa15.89■□□□□ 0.13
HMGB3P14-201ENST00000494195 PLEKHG3A1L390 1219 aa15.88■□□□□ 0.13
HMGB3P14-201ENST00000494195 PCDHB3Q9Y5E6 796 aa15.88■□□□□ 0.13
HMGB3P14-201ENST00000494195 ATP6V1AP38606 617 aa15.87■□□□□ 0.13
HMGB3P14-201ENST00000494195 GRIPAP1Q4V328 841 aa15.87■□□□□ 0.13
HMGB3P14-201ENST00000494195 IL27Q8NEV9 243 aa15.87■□□□□ 0.13
HMGB3P14-201ENST00000494195 TBC1D2Q9BYX2 928 aa15.87■□□□□ 0.13
HMGB3P14-201ENST00000494195 HOXA2O43364 376 aa15.84■□□□□ 0.13
HMGB3P14-201ENST00000494195 RSPH6AQ9H0K4 717 aa15.84■□□□□ 0.13
HMGB3P14-201ENST00000494195 PLSCR2Q9NRY7 297 aa15.84■□□□□ 0.13
HMGB3P14-201ENST00000494195 PUS10Q3MIT2 529 aaKnown RBP15.82■□□□□ 0.12
HMGB3P14-201ENST00000494195 MORN1Q5T089 497 aa15.81■□□□□ 0.12
HMGB3P14-201ENST00000494195 MYSM1Q5VVJ2 828 aa15.8■□□□□ 0.12
HMGB3P14-201ENST00000494195 BLOC1S3Q6QNY0 202 aa15.8■□□□□ 0.12
HMGB3P14-201ENST00000494195 MTRQ99707 1265 aa15.8■□□□□ 0.12
HMGB3P14-201ENST00000494195 MOXD2PA6NHM9 499 aa15.79■□□□□ 0.12
HMGB3P14-201ENST00000494195 NR1I2O75469 434 aa15.78■□□□□ 0.12
HMGB3P14-201ENST00000494195 COPS2P61201 443 aa15.78■□□□□ 0.12
HMGB3P14-201ENST00000494195 SH3D19Q5HYK7 790 aa15.78■□□□□ 0.12
HMGB3P14-201ENST00000494195 TJAP1Q5JTD0 557 aa15.77■□□□□ 0.12
HMGB3P14-201ENST00000494195 HLA-CQ95604 372 aa15.77■□□□□ 0.12
HMGB3P14-201ENST00000494195 NDUFV2P19404 249 aa15.76■□□□□ 0.11
HMGB3P14-201ENST00000494195 GJA5P36382 358 aa15.76■□□□□ 0.11
HMGB3P14-201ENST00000494195 IL21Q9HBE4 155 aa15.76■□□□□ 0.11
HMGB3P14-201ENST00000494195 SPTLC1O15269 473 aa15.75■□□□□ 0.11
HMGB3P14-201ENST00000494195 RSBN1LQ6PCB5 846 aaPredicted RBP15.75■□□□□ 0.11
HMGB3P14-201ENST00000494195 SLC27A5Q9Y2P5 690 aa15.75■□□□□ 0.11
HMGB3P14-201ENST00000494195 FDX1P10109 184 aa15.74■□□□□ 0.11
HMGB3P14-201ENST00000494195 SKIV2LQ15477 1246 aaKnown RBP15.74■□□□□ 0.11
HMGB3P14-201ENST00000494195 RIC3Q7Z5B4 369 aa15.74■□□□□ 0.11
HMGB3P14-201ENST00000494195 SCUBE3Q8IX30 993 aa15.74■□□□□ 0.11
HMGB3P14-201ENST00000494195 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
HMGB3P14-201ENST00000494195 ITGBL1O95965 494 aaPredicted RBP15.73■□□□□ 0.11
HMGB3P14-201ENST00000494195 GUCA2AQ02747 115 aa15.73■□□□□ 0.11
HMGB3P14-201ENST00000494195 CLK2P49760 499 aaKnown RBP15.72■□□□□ 0.11
HMGB3P14-201ENST00000494195 POLR3EQ9NVU0 708 aa15.72■□□□□ 0.11
HMGB3P14-201ENST00000494195 ZPR1O75312 459 aa15.7■□□□□ 0.1
HMGB3P14-201ENST00000494195 Q3C1V9 767 aa15.7■□□□□ 0.1
HMGB3P14-201ENST00000494195 LIMD1Q9UGP4 676 aa15.7■□□□□ 0.1
HMGB3P14-201ENST00000494195 KCNC4Q03721 635 aa15.69■□□□□ 0.1
HMGB3P14-201ENST00000494195 TUSC1Q2TAM9 212 aa15.69■□□□□ 0.1
HMGB3P14-201ENST00000494195 ZNF516Q92618 1163 aa15.69■□□□□ 0.1
HMGB3P14-201ENST00000494195 PCDHGC3Q9UN70 934 aa15.69■□□□□ 0.1
HMGB3P14-201ENST00000494195 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
HMGB3P14-201ENST00000494195 TMEM132AQ24JP5 1023 aa15.67■□□□□ 0.1
HMGB3P14-201ENST00000494195 THAP11Q96EK4 314 aa15.66■□□□□ 0.1
HMGB3P14-201ENST00000494195 PCMTD1Q96MG8 357 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms