RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
SMC2-205ENST00000493955 BCL2L12Q9HB09 334 aa11.57□□□□□ -0.56
SMC2-205ENST00000493955 LHX6Q9UPM6 363 aa11.57□□□□□ -0.56
SMC2-205ENST00000493955 COL9A1P20849 921 aa11.55□□□□□ -0.56
SMC2-205ENST00000493955 FAM198AQ9UFP1 575 aa11.55□□□□□ -0.56
SMC2-205ENST00000493955 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
SMC2-205ENST00000493955 PPP1R3GB7ZBB8 358 aa11.54□□□□□ -0.56
SMC2-205ENST00000493955 TRAK2O60296 914 aa11.54□□□□□ -0.56
SMC2-205ENST00000493955 EYA1Q99502 592 aa11.53□□□□□ -0.56
SMC2-205ENST00000493955 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.56
SMC2-205ENST00000493955 PTPREP23469 700 aa11.52□□□□□ -0.57
SMC2-205ENST00000493955 SULF1Q8IWU6 871 aa11.52□□□□□ -0.57
SMC2-205ENST00000493955 TSKSQ9UJT2 592 aa11.52□□□□□ -0.57
SMC2-205ENST00000493955 SPDYE5A6NIY4 337 aa11.51□□□□□ -0.57
SMC2-205ENST00000493955 NBPF26B4DH59 902 aa11.51□□□□□ -0.57
SMC2-205ENST00000493955 CD46P15529 392 aa11.5□□□□□ -0.57
SMC2-205ENST00000493955 PROSER2Q86WR7 435 aaPredicted RBP11.5□□□□□ -0.57
SMC2-205ENST00000493955 RAD21O60216 631 aa11.49□□□□□ -0.57
SMC2-205ENST00000493955 DNAJB2P25686 324 aa11.49□□□□□ -0.57
SMC2-205ENST00000493955 RFC5P40937 340 aa11.49□□□□□ -0.57
SMC2-205ENST00000493955 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
SMC2-205ENST00000493955 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
SMC2-205ENST00000493955 LIMD1Q9UGP4 676 aa11.49□□□□□ -0.57
SMC2-205ENST00000493955 BANK1Q8NDB2 785 aa11.48□□□□□ -0.57
SMC2-205ENST00000493955 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
SMC2-205ENST00000493955 RIC3Q7Z5B4 369 aa11.47□□□□□ -0.57
SMC2-205ENST00000493955 PPP2R2DQ66LE6 453 aa11.46□□□□□ -0.57
SMC2-205ENST00000493955 PACS2Q86VP3 889 aa11.46□□□□□ -0.57
SMC2-205ENST00000493955 TATDN2Q93075 761 aa11.46□□□□□ -0.57
SMC2-205ENST00000493955 POM121Q96HA1 1249 aa11.46□□□□□ -0.57
SMC2-205ENST00000493955 TMEM134Q9H6X4 195 aa11.46□□□□□ -0.57
SMC2-205ENST00000493955 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
SMC2-205ENST00000493955 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
SMC2-205ENST00000493955 TUSC1Q2TAM9 212 aa11.45□□□□□ -0.58
SMC2-205ENST00000493955 NUTM1Q86Y26 1132 aa11.45□□□□□ -0.58
SMC2-205ENST00000493955 CCDC82Q8N4S0 544 aa11.45□□□□□ -0.58
SMC2-205ENST00000493955 C3orf80F5H4A9 247 aa11.44□□□□□ -0.58
SMC2-205ENST00000493955 TMEM259Q4ZIN3 620 aa11.44□□□□□ -0.58
SMC2-205ENST00000493955 SPTLC1O15269 473 aa11.43□□□□□ -0.58
SMC2-205ENST00000493955 RSBN1LQ6PCB5 846 aaPredicted RBP11.43□□□□□ -0.58
SMC2-205ENST00000493955 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
SMC2-205ENST00000493955 FBXO31Q5XUX0 539 aaPredicted RBP11.43□□□□□ -0.58
SMC2-205ENST00000493955 LSM11P83369 360 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMC2-205ENST00000493955 SNRKQ9NRH2 765 aa11.42□□□□□ -0.58
SMC2-205ENST00000493955 COG6Q9Y2V7 657 aa11.42□□□□□ -0.58
SMC2-205ENST00000493955 GJA5P36382 358 aa11.41□□□□□ -0.58
SMC2-205ENST00000493955 MOXD2PA6NHM9 499 aa11.4□□□□□ -0.58
SMC2-205ENST00000493955 PROX2Q3B8N5 592 aa11.39□□□□□ -0.59
SMC2-205ENST00000493955 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
SMC2-205ENST00000493955 KCNK17Q96T54 332 aa11.39□□□□□ -0.59
SMC2-205ENST00000493955 ZNF777Q9ULD5 760 aaPredicted RBP11.39□□□□□ -0.59
SMC2-205ENST00000493955 SMAPO00193 183 aa11.38□□□□□ -0.59
SMC2-205ENST00000493955 RDH13Q8NBN7 331 aa11.38□□□□□ -0.59
SMC2-205ENST00000493955 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
SMC2-205ENST00000493955 SOCS7O14512 581 aa11.35□□□□□ -0.59
SMC2-205ENST00000493955 LILRB3O75022 631 aa11.35□□□□□ -0.59
SMC2-205ENST00000493955 NDUFV2P19404 249 aa11.35□□□□□ -0.59
SMC2-205ENST00000493955 QPCTQ16769 361 aa11.35□□□□□ -0.59
SMC2-205ENST00000493955 MTMR14Q8NCE2 650 aa11.35□□□□□ -0.59
SMC2-205ENST00000493955 KDM4AO75164 1064 aa11.35□□□□□ -0.59
SMC2-205ENST00000493955 USP46P62068 366 aa11.34□□□□□ -0.59
SMC2-205ENST00000493955 RSPH4AQ5TD94 716 aa11.34□□□□□ -0.59
SMC2-205ENST00000493955 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
SMC2-205ENST00000493955 ZBED2Q9BTP6 218 aa11.33□□□□□ -0.6
SMC2-205ENST00000493955 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
SMC2-205ENST00000493955 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
SMC2-205ENST00000493955 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
SMC2-205ENST00000493955 PRPF38BQ5VTL8 546 aaKnown RBP11.32□□□□□ -0.6
SMC2-205ENST00000493955 ZNF330Q9Y3S2 320 aaPredicted RBP11.32□□□□□ -0.6
SMC2-205ENST00000493955 NUTM2BA6NNL0 878 aaPredicted RBP11.31□□□□□ -0.6
SMC2-205ENST00000493955 NUTM2EB1AL46 878 aaPredicted RBP11.31□□□□□ -0.6
SMC2-205ENST00000493955 AP1G2O75843 785 aa11.31□□□□□ -0.6
SMC2-205ENST00000493955 GCGRP47871 477 aa11.31□□□□□ -0.6
SMC2-205ENST00000493955 NUTM2DQ5VT03 806 aaPredicted RBP11.31□□□□□ -0.6
SMC2-205ENST00000493955 NUTM2AQ8IVF1 878 aaPredicted RBP11.31□□□□□ -0.6
SMC2-205ENST00000493955 GDPD2Q9HCC8 539 aa11.31□□□□□ -0.6
SMC2-205ENST00000493955 PODXL2Q9NZ53 605 aa11.31□□□□□ -0.6
SMC2-205ENST00000493955 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
SMC2-205ENST00000493955 AXIN2Q9Y2T1 843 aa11.31□□□□□ -0.6
SMC2-205ENST00000493955 HOXA2O43364 376 aa11.3□□□□□ -0.6
SMC2-205ENST00000493955 PBX2P40425 430 aa11.3□□□□□ -0.6
SMC2-205ENST00000493955 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
SMC2-205ENST00000493955 WWC1Q8IX03 1113 aa11.3□□□□□ -0.6
SMC2-205ENST00000493955 PRM3Q9NNZ6 103 aa11.3□□□□□ -0.6
SMC2-205ENST00000493955 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
SMC2-205ENST00000493955 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
SMC2-205ENST00000493955 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
SMC2-205ENST00000493955 CABLES1Q8TDN4 633 aa11.28□□□□□ -0.6
SMC2-205ENST00000493955 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
SMC2-205ENST00000493955 FDX1P10109 184 aa11.27□□□□□ -0.6
SMC2-205ENST00000493955 SWT1Q5T5J6 900 aaKnown RBP11.27□□□□□ -0.6
SMC2-205ENST00000493955 HRCP23327 699 aa11.26□□□□□ -0.61
SMC2-205ENST00000493955 PSEN2P49810 448 aa11.26□□□□□ -0.61
SMC2-205ENST00000493955 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
SMC2-205ENST00000493955 SLC10A3P09131 477 aa11.26□□□□□ -0.61
SMC2-205ENST00000493955 ABL2P42684 1182 aa11.26□□□□□ -0.61
SMC2-205ENST00000493955 HCSTQ9UBK5 93 aa11.26□□□□□ -0.61
SMC2-205ENST00000493955 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
SMC2-205ENST00000493955 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
SMC2-205ENST00000493955 SEPT9Q9UHD8 586 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms