RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
PDLIM1-205ENST00000493949 PPARGC1BQ86YN6 1023 aaKnown RBP16.17■□□□□ 0.18
PDLIM1-205ENST00000493949 TRIM52Q96A61 297 aa16.17■□□□□ 0.18
PDLIM1-205ENST00000493949 ARHGAP31Q2M1Z3 1444 aa16.17■□□□□ 0.18
PDLIM1-205ENST00000493949 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
PDLIM1-205ENST00000493949 PROSER2Q86WR7 435 aaPredicted RBP16.16■□□□□ 0.18
PDLIM1-205ENST00000493949 SLAIN2Q9P270 581 aa16.16■□□□□ 0.18
PDLIM1-205ENST00000493949 MSH6P52701 1360 aa16.15■□□□□ 0.18
PDLIM1-205ENST00000493949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.175e-10■□□□□ 9
PDLIM1-205ENST00000493949 RXRBP28702 533 aa16.13■□□□□ 0.17
PDLIM1-205ENST00000493949 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
PDLIM1-205ENST00000493949 AHDC1Q5TGY3 1603 aaPredicted RBP16.12■□□□□ 0.17
PDLIM1-205ENST00000493949 TSPY4P0CV99 314 aa16.12■□□□□ 0.17
PDLIM1-205ENST00000493949 TSPY10P0CW01 314 aa16.12■□□□□ 0.17
PDLIM1-205ENST00000493949 EFCAB6Q5THR3 1501 aa16.11■□□□□ 0.17
PDLIM1-205ENST00000493949 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
PDLIM1-205ENST00000493949 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
PDLIM1-205ENST00000493949 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
PDLIM1-205ENST00000493949 DIP2AQ14689 1571 aa16.08■□□□□ 0.16
PDLIM1-205ENST00000493949 SLC26A8Q96RN1 970 aa16.07■□□□□ 0.16
PDLIM1-205ENST00000493949 DUOX2Q9NRD8 1548 aa16.05■□□□□ 0.16
PDLIM1-205ENST00000493949 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.04■□□□□ 0.16
PDLIM1-205ENST00000493949 RGS12O14924 1447 aa16.03■□□□□ 0.16
PDLIM1-205ENST00000493949 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
PDLIM1-205ENST00000493949 ADGRB3O60242 1522 aa16.01■□□□□ 0.15
PDLIM1-205ENST00000493949 IDI1Q13907 227 aa16.01■□□□□ 0.15
PDLIM1-205ENST00000493949 AFF2P51816 1311 aa16■□□□□ 0.15
PDLIM1-205ENST00000493949 EP400Q96L91 3159 aa15.99■□□□□ 0.15
PDLIM1-205ENST00000493949 LMTK2Q8IWU2 1503 aa15.99■□□□□ 0.15
PDLIM1-205ENST00000493949 RBM6P78332 1123 aaKnown RBP15.98■□□□□ 0.15
PDLIM1-205ENST00000493949 CADPS2Q86UW7 1296 aa15.98■□□□□ 0.15
PDLIM1-205ENST00000493949 ERBINQ96RT1 1412 aa15.97■□□□□ 0.15
PDLIM1-205ENST00000493949 MYO5BQ9ULV0 1848 aa15.97■□□□□ 0.15
PDLIM1-205ENST00000493949 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.15
PDLIM1-205ENST00000493949 NOS1P29475 1434 aa15.96■□□□□ 0.15
PDLIM1-205ENST00000493949 SETD5Q9C0A6 1442 aa15.96■□□□□ 0.15
PDLIM1-205ENST00000493949 NHSL1Q5SYE7 1610 aa15.96■□□□□ 0.15
PDLIM1-205ENST00000493949 PLEKHG1Q9ULL1 1385 aa15.96■□□□□ 0.15
PDLIM1-205ENST00000493949 ZFYVE9O95405 1425 aa15.95■□□□□ 0.14
PDLIM1-205ENST00000493949 C19orf44Q9H6X5 657 aa15.95■□□□□ 0.14
PDLIM1-205ENST00000493949 ZRANB1Q9UGI0 708 aa15.95■□□□□ 0.14
PDLIM1-205ENST00000493949 ATAD2Q6PL18 1390 aa15.95■□□□□ 0.14
PDLIM1-205ENST00000493949 QTRT2Q9H974 415 aaKnown RBP15.94■□□□□ 0.14
PDLIM1-205ENST00000493949 BRINP3Q76B58 766 aa15.93■□□□□ 0.14
PDLIM1-205ENST00000493949 KIF15Q9NS87 1388 aa15.92■□□□□ 0.14
PDLIM1-205ENST00000493949 NUTM2BA6NNL0 878 aaPredicted RBP15.92■□□□□ 0.14
PDLIM1-205ENST00000493949 NUTM2EB1AL46 878 aaPredicted RBP15.92■□□□□ 0.14
PDLIM1-205ENST00000493949 NUTM2AQ8IVF1 878 aaPredicted RBP15.92■□□□□ 0.14
PDLIM1-205ENST00000493949 SLC52A1Q9NWF4 448 aa15.92■□□□□ 0.14
PDLIM1-205ENST00000493949 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
PDLIM1-205ENST00000493949 CROCC2H7BZ55 1655 aa15.92■□□□□ 0.14
PDLIM1-205ENST00000493949 KANK1Q14678 1352 aa15.91■□□□□ 0.14
PDLIM1-205ENST00000493949 ATF3P18847 181 aa15.91■□□□□ 0.14
PDLIM1-205ENST00000493949 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-205ENST00000493949 MYOM3Q5VTT5 1437 aa15.91■□□□□ 0.14
PDLIM1-205ENST00000493949 PIK3R4Q99570 1358 aa15.9■□□□□ 0.14
PDLIM1-205ENST00000493949 ASXL1Q8IXJ9 1541 aa15.9■□□□□ 0.14
PDLIM1-205ENST00000493949 DCCP43146 1447 aa15.9■□□□□ 0.14
PDLIM1-205ENST00000493949 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-205ENST00000493949 BCANQ96GW7 911 aa15.89■□□□□ 0.13
PDLIM1-205ENST00000493949 NGLY1Q96IV0 654 aa15.89■□□□□ 0.13
PDLIM1-205ENST00000493949 GCC2Q8IWJ2 1684 aa15.89■□□□□ 0.13
PDLIM1-205ENST00000493949 TMEM131LA2VDJ0 1609 aa15.88■□□□□ 0.13
PDLIM1-205ENST00000493949 C14orf37Q86TY3 774 aa15.88■□□□□ 0.13
PDLIM1-205ENST00000493949 ADAMTS13Q76LX8 1427 aa15.87■□□□□ 0.13
PDLIM1-205ENST00000493949 RIMS2Q9UQ26 1411 aa15.87■□□□□ 0.13
PDLIM1-205ENST00000493949 LRRC59Q96AG4 307 aaKnown RBP15.87■□□□□ 0.13
PDLIM1-205ENST00000493949 C8orf37Q96NL8 207 aa15.87■□□□□ 0.13
PDLIM1-205ENST00000493949 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
PDLIM1-205ENST00000493949 CCDC125Q86Z20 511 aa15.86■□□□□ 0.13
PDLIM1-205ENST00000493949 LRP5O75197 1615 aa15.86■□□□□ 0.13
PDLIM1-205ENST00000493949 PNPLA6Q8IY17 1366 aa15.86■□□□□ 0.13
PDLIM1-205ENST00000493949 RPRD2Q5VT52 1461 aaKnown RBP15.84■□□□□ 0.13
PDLIM1-205ENST00000493949 MST1RQ04912 1400 aa15.84■□□□□ 0.13
PDLIM1-205ENST00000493949 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
PDLIM1-205ENST00000493949 RRP7BPQ9NSQ0 103 aa15.82■□□□□ 0.12
PDLIM1-205ENST00000493949 ABCC5O15440 1437 aa15.82■□□□□ 0.12
PDLIM1-205ENST00000493949 TRPM2O94759 1503 aa15.82■□□□□ 0.12
PDLIM1-205ENST00000493949 LAMC1P11047 1609 aa15.82■□□□□ 0.12
PDLIM1-205ENST00000493949 XRN1Q8IZH2 1706 aaKnown RBP15.8■□□□□ 0.12
PDLIM1-205ENST00000493949 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.8■□□□□ 0.12
PDLIM1-205ENST00000493949 TRPC5Q9UL62 973 aaPredicted RBP15.8■□□□□ 0.12
PDLIM1-205ENST00000493949 ATRNO75882 1429 aa15.79■□□□□ 0.12
PDLIM1-205ENST00000493949 PTPRUQ92729 1446 aa15.79■□□□□ 0.12
PDLIM1-205ENST00000493949 MYT1Q01538 1121 aa15.79■□□□□ 0.12
PDLIM1-205ENST00000493949 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
PDLIM1-205ENST00000493949 FNBP4Q8N3X1 1017 aaPredicted RBP15.78■□□□□ 0.12
PDLIM1-205ENST00000493949 USP21Q9UK80 565 aa15.77■□□□□ 0.12
PDLIM1-205ENST00000493949 PTCH1Q13635 1447 aa15.77■□□□□ 0.11
PDLIM1-205ENST00000493949 UNC13BO14795 1591 aa15.76■□□□□ 0.11
PDLIM1-205ENST00000493949 AMOTL2Q9Y2J4 779 aa15.76■□□□□ 0.11
PDLIM1-205ENST00000493949 DAPK1P53355 1430 aa15.75■□□□□ 0.11
PDLIM1-205ENST00000493949 COL22A1Q8NFW1 1626 aaPredicted RBP15.75■□□□□ 0.11
PDLIM1-205ENST00000493949 MARF1Q9Y4F3 1742 aaKnown RBP15.74■□□□□ 0.11
PDLIM1-205ENST00000493949 ADAMTS2O95450 1211 aa15.74■□□□□ 0.11
PDLIM1-205ENST00000493949 PTPN23Q9H3S7 1636 aa15.74■□□□□ 0.11
PDLIM1-205ENST00000493949 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
PDLIM1-205ENST00000493949 BLMP54132 1417 aaPredicted RBP15.72■□□□□ 0.11
PDLIM1-205ENST00000493949 DDX17Q92841 729 aaKnown RBP15.72■□□□□ 0.11
PDLIM1-205ENST00000493949 ANKRD30AQ9BXX3 1397 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms