RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 MROH1Q8NDA8 1641 aa12.91□□□□□ -0.34
NPHP3-209ENST00000493732 KIDINS220Q9ULH0 1771 aa12.91□□□□□ -0.34
NPHP3-209ENST00000493732 KNSTRNQ9Y448 316 aa12.91□□□□□ -0.34
NPHP3-209ENST00000493732 CD109Q6YHK3 1445 aa12.91□□□□□ -0.34
NPHP3-209ENST00000493732 SYNMO15061 1565 aa12.91□□□□□ -0.34
NPHP3-209ENST00000493732 KIF1BO60333 1816 aa12.9□□□□□ -0.34
NPHP3-209ENST00000493732 NPC1L1Q9UHC9 1359 aa12.9□□□□□ -0.34
NPHP3-209ENST00000493732 POGZQ7Z3K3 1410 aa12.9□□□□□ -0.35
NPHP3-209ENST00000493732 MAP3K4Q9Y6R4 1608 aa12.89□□□□□ -0.35
NPHP3-209ENST00000493732 NEO1Q92859 1461 aa12.88□□□□□ -0.35
NPHP3-209ENST00000493732 CC2D1BQ5T0F9 858 aaKnown RBP12.87□□□□□ -0.35
NPHP3-209ENST00000493732 BLMP54132 1417 aaPredicted RBP12.87□□□□□ -0.35
NPHP3-209ENST00000493732 HECW2Q9P2P5 1572 aa12.86□□□□□ -0.35
NPHP3-209ENST00000493732 RPGRIP1LQ68CZ1 1315 aa12.86□□□□□ -0.35
NPHP3-209ENST00000493732 SBNO2Q9Y2G9 1366 aa12.85□□□□□ -0.35
NPHP3-209ENST00000493732 NRXN1Q9ULB1 1477 aa12.85□□□□□ -0.35
NPHP3-209ENST00000493732 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
NPHP3-209ENST00000493732 PPRC1Q5VV67 1664 aaKnown RBP12.85□□□□□ -0.35
NPHP3-209ENST00000493732 FANCIQ9NVI1 1328 aa12.84□□□□□ -0.35
NPHP3-209ENST00000493732 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
NPHP3-209ENST00000493732 IFT172Q9UG01 1749 aa12.84□□□□□ -0.35
NPHP3-209ENST00000493732 SETBP1Q9Y6X0 1596 aa12.84□□□□□ -0.35
NPHP3-209ENST00000493732 ADGRB3O60242 1522 aa12.83□□□□□ -0.36
NPHP3-209ENST00000493732 PIK3C2GO75747 1445 aa12.83□□□□□ -0.36
NPHP3-209ENST00000493732 B4GALNT3Q6L9W6 998 aa12.83□□□□□ -0.36
NPHP3-209ENST00000493732 CCDC136Q96JN2 1154 aa12.83□□□□□ -0.36
NPHP3-209ENST00000493732 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
NPHP3-209ENST00000493732 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
NPHP3-209ENST00000493732 ABCA6Q8N139 1617 aa12.82□□□□□ -0.36
NPHP3-209ENST00000493732 WDR43Q15061 677 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPHP3-209ENST00000493732 MYO3AQ8NEV4 1616 aa12.81□□□□□ -0.36
NPHP3-209ENST00000493732 PPP2R1AP30153 589 aa12.81□□□□□ -0.36
NPHP3-209ENST00000493732 RRP1P56182 461 aaKnown RBP12.81□□□□□ -0.36
NPHP3-209ENST00000493732 CFAP70Q5T0N1 1121 aa12.8□□□□□ -0.36
NPHP3-209ENST00000493732 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
NPHP3-209ENST00000493732 ADGRF5Q8IZF2 1346 aa12.8□□□□□ -0.36
NPHP3-209ENST00000493732 ANP32EQ9BTT0 268 aa12.8□□□□□ -0.36
NPHP3-209ENST00000493732 NPATQ14207 1427 aa12.79□□□□□ -0.36
NPHP3-209ENST00000493732 FRMPD1Q5SYB0 1578 aa12.79□□□□□ -0.36
NPHP3-209ENST00000493732 UGGT1Q9NYU2 1555 aa12.79□□□□□ -0.36
NPHP3-209ENST00000493732 ABCC3O15438 1527 aa12.78□□□□□ -0.36
NPHP3-209ENST00000493732 MYOM1P52179 1685 aa12.78□□□□□ -0.36
NPHP3-209ENST00000493732 ERVK-7P63135 1459 aa12.78□□□□□ -0.36
NPHP3-209ENST00000493732 ARHGAP31Q2M1Z3 1444 aa12.78□□□□□ -0.36
NPHP3-209ENST00000493732 GGT6Q6P531 493 aa12.78□□□□□ -0.36
NPHP3-209ENST00000493732 PUS7Q96PZ0 661 aaKnown RBP12.78□□□□□ -0.36
NPHP3-209ENST00000493732 C14orf93Q9H972 538 aaKnown RBP12.78□□□□□ -0.36
NPHP3-209ENST00000493732 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.36
NPHP3-209ENST00000493732 NOS1P29475 1434 aa12.77□□□□□ -0.37
NPHP3-209ENST00000493732 MROH2AA6NES4 1674 aa12.77□□□□□ -0.37
NPHP3-209ENST00000493732 ZC3H13Q5T200 1668 aaKnown RBP12.77□□□□□ -0.37
NPHP3-209ENST00000493732 PPLO60437 1756 aa12.76□□□□□ -0.37
NPHP3-209ENST00000493732 VGFO15240 615 aaPredicted RBP12.76□□□□□ -0.37
NPHP3-209ENST00000493732 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
NPHP3-209ENST00000493732 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
NPHP3-209ENST00000493732 CAMSAP1Q5T5Y3 1602 aa12.75□□□□□ -0.37
NPHP3-209ENST00000493732 SLC52A1Q9NWF4 448 aa12.74□□□□□ -0.37
NPHP3-209ENST00000493732 GLI2P10070 1586 aa12.73□□□□□ -0.37
NPHP3-209ENST00000493732 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
NPHP3-209ENST00000493732 DIP2CQ9Y2E4 1556 aa12.73□□□□□ -0.37
NPHP3-209ENST00000493732 PIK3C2BO00750 1634 aa12.72□□□□□ -0.37
NPHP3-209ENST00000493732 ZFYVE9O95405 1425 aa12.72□□□□□ -0.37
NPHP3-209ENST00000493732 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
NPHP3-209ENST00000493732 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.37
NPHP3-209ENST00000493732 ADGRB1O14514 1584 aa12.71□□□□□ -0.38
NPHP3-209ENST00000493732 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
NPHP3-209ENST00000493732 RICTORQ6R327 1708 aa12.7□□□□□ -0.38
NPHP3-209ENST00000493732 RAPGEF3O95398 923 aa12.7□□□□□ -0.38
NPHP3-209ENST00000493732 POLR3AO14802 1390 aaPredicted RBP12.69□□□□□ -0.38
NPHP3-209ENST00000493732 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
NPHP3-209ENST00000493732 ZNF521Q96K83 1311 aa12.69□□□□□ -0.38
NPHP3-209ENST00000493732 QRICH2Q9H0J4 1663 aa12.68□□□□□ -0.38
NPHP3-209ENST00000493732 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
NPHP3-209ENST00000493732 TRAK1Q9UPV9 953 aa12.68□□□□□ -0.38
NPHP3-209ENST00000493732 EVC2Q86UK5 1308 aa12.68□□□□□ -0.38
NPHP3-209ENST00000493732 TCERG1O14776 1098 aaKnown RBP12.68□□□□□ -0.38
NPHP3-209ENST00000493732 ERICH6Q7L0X2 663 aa12.68□□□□□ -0.38
NPHP3-209ENST00000493732 EXOC6Q8TAG9 804 aa12.68□□□□□ -0.38
NPHP3-209ENST00000493732 USP32Q8NFA0 1604 aa12.68□□□□□ -0.38
NPHP3-209ENST00000493732 CARD14Q9BXL6 1004 aa12.67□□□□□ -0.38
NPHP3-209ENST00000493732 NSD2O96028 1365 aa12.67□□□□□ -0.38
NPHP3-209ENST00000493732 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
NPHP3-209ENST00000493732 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
NPHP3-209ENST00000493732 MS4A1P11836 297 aa12.66□□□□□ -0.38
NPHP3-209ENST00000493732 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
NPHP3-209ENST00000493732 CFAP65Q6ZU64 1925 aaKnown RBP12.65□□□□□ -0.38
NPHP3-209ENST00000493732 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
NPHP3-209ENST00000493732 CGNL1Q0VF96 1302 aa12.65□□□□□ -0.38
NPHP3-209ENST00000493732 SLFN5Q08AF3 891 aa12.65□□□□□ -0.38
NPHP3-209ENST00000493732 MORC1Q86VD1 984 aa12.65□□□□□ -0.38
NPHP3-209ENST00000493732 E9PSI1 815 aa12.64□□□□□ -0.39
NPHP3-209ENST00000493732 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
NPHP3-209ENST00000493732 NSD3Q9BZ95 1437 aa12.64□□□□□ -0.39
NPHP3-209ENST00000493732 SIGLEC1Q9BZZ2 1709 aa12.64□□□□□ -0.39
NPHP3-209ENST00000493732 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
NPHP3-209ENST00000493732 CFAP53Q96M91 514 aa12.64□□□□□ -0.39
NPHP3-209ENST00000493732 IDI1Q13907 227 aa12.63□□□□□ -0.39
NPHP3-209ENST00000493732 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
NPHP3-209ENST00000493732 REREQ9P2R6 1566 aa12.63□□□□□ -0.39
NPHP3-209ENST00000493732 ANP32AP39687 249 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms