RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 REREQ9P2R6 1566 aa14.75□□□□□ -0.05
PHACTR4-204ENST00000493669 PIK3C2BO00750 1634 aa14.74□□□□□ -0.05
PHACTR4-204ENST00000493669 FAM69CQ0P6D2 419 aa14.74□□□□□ -0.05
PHACTR4-204ENST00000493669 SUPT16HQ9Y5B9 1047 aaKnown RBP14.74□□□□□ -0.05
PHACTR4-204ENST00000493669 RPGRIP1LQ68CZ1 1315 aa14.73□□□□□ -0.05
PHACTR4-204ENST00000493669 CDCA8Q53HL2 280 aa14.73□□□□□ -0.05
PHACTR4-204ENST00000493669 YEATS2Q9ULM3 1422 aa14.73□□□□□ -0.05
PHACTR4-204ENST00000493669 SETBP1Q9Y6X0 1596 aa14.73□□□□□ -0.05
PHACTR4-204ENST00000493669 PPLO60437 1756 aa14.72□□□□□ -0.05
PHACTR4-204ENST00000493669 BRD4O60885 1362 aaPredicted RBP14.72□□□□□ -0.05
PHACTR4-204ENST00000493669 MYBBP1AQ9BQG0 1328 aaKnown RBP14.71□□□□□ -0.05
PHACTR4-204ENST00000493669 ZBED9Q6R2W3 1325 aa14.71□□□□□ -0.06
PHACTR4-204ENST00000493669 PARD3Q8TEW0 1356 aa14.7□□□□□ -0.06
PHACTR4-204ENST00000493669 AGLP35573 1532 aa14.7□□□□□ -0.06
PHACTR4-204ENST00000493669 SIGLEC1Q9BZZ2 1709 aa14.7□□□□□ -0.06
PHACTR4-204ENST00000493669 SYNMO15061 1565 aa14.7□□□□□ -0.06
PHACTR4-204ENST00000493669 FAM9BQ8IZU0 186 aa14.69□□□□□ -0.06
PHACTR4-204ENST00000493669 MYO3AQ8NEV4 1616 aa14.69□□□□□ -0.06
PHACTR4-204ENST00000493669 PER1O15534 1290 aaPredicted RBP14.69□□□□□ -0.06
PHACTR4-204ENST00000493669 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
PHACTR4-204ENST00000493669 PIK3C2GO75747 1445 aa14.68□□□□□ -0.06
PHACTR4-204ENST00000493669 SBNO2Q9Y2G9 1366 aa14.67□□□□□ -0.06
PHACTR4-204ENST00000493669 NEFLP07196 543 aa14.67□□□□□ -0.06
PHACTR4-204ENST00000493669 PPP6R1Q9UPN7 881 aa14.67□□□□□ -0.06
PHACTR4-204ENST00000493669 TMC1Q8TDI8 760 aa14.66□□□□□ -0.06
PHACTR4-204ENST00000493669 CFAP70Q5T0N1 1121 aa14.65□□□□□ -0.06
PHACTR4-204ENST00000493669 SLC52A1Q9NWF4 448 aa14.65□□□□□ -0.06
PHACTR4-204ENST00000493669 TSPOAP1O95153 1857 aa14.65□□□□□ -0.06
PHACTR4-204ENST00000493669 KDM5AP29375 1690 aaKnown RBP14.65□□□□□ -0.06
PHACTR4-204ENST00000493669 NLRP13Q86W25 1043 aa14.65□□□□□ -0.06
PHACTR4-204ENST00000493669 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
PHACTR4-204ENST00000493669 LRPPRCP42704 1394 aaKnown RBP14.64□□□□□ -0.07
PHACTR4-204ENST00000493669 CFAP65Q6ZU64 1925 aaKnown RBP14.64□□□□□ -0.07
PHACTR4-204ENST00000493669 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
PHACTR4-204ENST00000493669 PANK3Q9H999 370 aa14.64□□□□□ -0.07
PHACTR4-204ENST00000493669 ZFYVE9O95405 1425 aa14.64□□□□□ -0.07
PHACTR4-204ENST00000493669 NEXMIFQ5QGS0 1516 aa14.63□□□□□ -0.07
PHACTR4-204ENST00000493669 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
PHACTR4-204ENST00000493669 C14orf93Q9H972 538 aaKnown RBP14.63□□□□□ -0.07
PHACTR4-204ENST00000493669 ADGRB1O14514 1584 aa14.63□□□□□ -0.07
PHACTR4-204ENST00000493669 KIF13AQ9H1H9 1805 aa14.63□□□□□ -0.07
PHACTR4-204ENST00000493669 INSRP06213 1382 aa14.63□□□□□ -0.07
PHACTR4-204ENST00000493669 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
PHACTR4-204ENST00000493669 MYOM1P52179 1685 aa14.62□□□□□ -0.07
PHACTR4-204ENST00000493669 NPC1L1Q9UHC9 1359 aa14.61□□□□□ -0.07
PHACTR4-204ENST00000493669 ARHGEF40Q8TER5 1519 aa14.61□□□□□ -0.07
PHACTR4-204ENST00000493669 VGFO15240 615 aaPredicted RBP14.61□□□□□ -0.07
PHACTR4-204ENST00000493669 ERVK-7P63135 1459 aa14.61□□□□□ -0.07
PHACTR4-204ENST00000493669 FKBP8Q14318 412 aa14.6□□□□□ -0.07
PHACTR4-204ENST00000493669 TMEM131LA2VDJ0 1609 aa14.58□□□□□ -0.07
PHACTR4-204ENST00000493669 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.07
PHACTR4-204ENST00000493669 ASXL1Q8IXJ9 1541 aa14.58□□□□□ -0.08
PHACTR4-204ENST00000493669 CENPJQ9HC77 1338 aaPredicted RBP14.58□□□□□ -0.08
PHACTR4-204ENST00000493669 KNSTRNQ9Y448 316 aa14.57□□□□□ -0.08
PHACTR4-204ENST00000493669 IDI1Q13907 227 aa14.57□□□□□ -0.08
PHACTR4-204ENST00000493669 SMG6Q86US8 1419 aaKnown RBP14.57□□□□□ -0.08
PHACTR4-204ENST00000493669 ERICH6BQ5W0A0 696 aa14.56□□□□□ -0.08
PHACTR4-204ENST00000493669 QRICH2Q9H0J4 1663 aa14.56□□□□□ -0.08
PHACTR4-204ENST00000493669 SPATA31D1Q6ZQQ2 1576 aa14.55□□□□□ -0.08
PHACTR4-204ENST00000493669 AMER1Q5JTC6 1135 aaPredicted RBP14.54□□□□□ -0.08
PHACTR4-204ENST00000493669 CC2D1BQ5T0F9 858 aaKnown RBP14.54□□□□□ -0.08
PHACTR4-204ENST00000493669 PUS7Q96PZ0 661 aaKnown RBP14.54□□□□□ -0.08
PHACTR4-204ENST00000493669 CLTCQ00610 1675 aaKnown RBP14.53□□□□□ -0.08
PHACTR4-204ENST00000493669 ARHGEF28Q8N1W1 1705 aaKnown RBP14.52□□□□□ -0.08
PHACTR4-204ENST00000493669 MYO5BQ9ULV0 1848 aa14.52□□□□□ -0.08
PHACTR4-204ENST00000493669 NUDCQ9Y266 331 aa14.51□□□□□ -0.09
PHACTR4-204ENST00000493669 BLMP54132 1417 aaPredicted RBP14.51□□□□□ -0.09
PHACTR4-204ENST00000493669 TRAK1Q9UPV9 953 aa14.5□□□□□ -0.09
PHACTR4-204ENST00000493669 PPP2R1AP30153 589 aa14.48□□□□□ -0.09
PHACTR4-204ENST00000493669 USP32Q8NFA0 1604 aa14.47□□□□□ -0.09
PHACTR4-204ENST00000493669 PDE3BQ13370 1112 aa14.47□□□□□ -0.09
PHACTR4-204ENST00000493669 FBXO31Q5XUX0 539 aaPredicted RBP14.47□□□□□ -0.09
PHACTR4-204ENST00000493669 TMEM132EQ6IEE7 984 aa14.47□□□□□ -0.09
PHACTR4-204ENST00000493669 EVC2Q86UK5 1308 aa14.46□□□□□ -0.09
PHACTR4-204ENST00000493669 A2ML1A8K2U0 1454 aa14.46□□□□□ -0.09
PHACTR4-204ENST00000493669 BCANQ96GW7 911 aa14.45□□□□□ -0.1
PHACTR4-204ENST00000493669 TULP4Q9NRJ4 1543 aa14.45□□□□□ -0.1
PHACTR4-204ENST00000493669 NINLQ9Y2I6 1382 aa14.44□□□□□ -0.1
PHACTR4-204ENST00000493669 RNF123Q5XPI4 1314 aa14.44□□□□□ -0.1
PHACTR4-204ENST00000493669 ALKQ9UM73 1620 aa14.44□□□□□ -0.1
PHACTR4-204ENST00000493669 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
PHACTR4-204ENST00000493669 PTPRMP28827 1452 aa14.43□□□□□ -0.1
PHACTR4-204ENST00000493669 NUTM2DQ5VT03 806 aaPredicted RBP14.43□□□□□ -0.1
PHACTR4-204ENST00000493669 CARD14Q9BXL6 1004 aa14.43□□□□□ -0.1
PHACTR4-204ENST00000493669 YTHDC2Q9H6S0 1430 aaKnown RBP14.43□□□□□ -0.1
PHACTR4-204ENST00000493669 ESF1Q9H501 851 aaKnown RBP14.42□□□□□ -0.1
PHACTR4-204ENST00000493669 DLC1Q96QB1 1528 aa14.41□□□□□ -0.1
PHACTR4-204ENST00000493669 RIMS2Q9UQ26 1411 aa14.41□□□□□ -0.1
PHACTR4-204ENST00000493669 ZMYM3Q14202 1370 aa14.41□□□□□ -0.1
PHACTR4-204ENST00000493669 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
PHACTR4-204ENST00000493669 WDR43Q15061 677 aaKnown RBP eCLIP14.4□□□□□ -0.1
PHACTR4-204ENST00000493669 NSD2O96028 1365 aa14.4□□□□□ -0.1
PHACTR4-204ENST00000493669 ANKRD36BQ8N2N9 1353 aa14.4□□□□□ -0.1
PHACTR4-204ENST00000493669 PPP4R2Q9NY27 417 aa14.4□□□□□ -0.1
PHACTR4-204ENST00000493669 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.39□□□□□ -0.11
PHACTR4-204ENST00000493669 MLECQ14165 292 aa14.39□□□□□ -0.11
PHACTR4-204ENST00000493669 SETD1AO15047 1707 aaKnown RBP14.39□□□□□ -0.11
PHACTR4-204ENST00000493669 ATAD2Q6PL18 1390 aa14.38□□□□□ -0.11
PHACTR4-204ENST00000493669 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
PHACTR4-204ENST00000493669 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms