RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
CAB39-206ENST00000493540 MED1Q15648 1581 aaPredicted RBP11.4□□□□□ -0.58
CAB39-206ENST00000493540 ZNF335Q9H4Z2 1342 aaPredicted RBP11.39□□□□□ -0.59
CAB39-206ENST00000493540 ERVK-7P63135 1459 aa11.39□□□□□ -0.59
CAB39-206ENST00000493540 PRKAR2AP13861 404 aaKnown RBP11.39□□□□□ -0.59
CAB39-206ENST00000493540 ZNF777Q9ULD5 760 aaPredicted RBP11.39□□□□□ -0.59
CAB39-206ENST00000493540 SLIT1O75093 1534 aa11.39□□□□□ -0.59
CAB39-206ENST00000493540 TNRQ92752 1358 aa11.39□□□□□ -0.59
CAB39-206ENST00000493540 ARHGAP23Q9P227 1491 aa11.38□□□□□ -0.59
CAB39-206ENST00000493540 MIA2Q96PC5 1412 aa11.38□□□□□ -0.59
CAB39-206ENST00000493540 MYO5BQ9ULV0 1848 aa11.38□□□□□ -0.59
CAB39-206ENST00000493540 ESF1Q9H501 851 aaKnown RBP11.38□□□□□ -0.59
CAB39-206ENST00000493540 DUOX2Q9NRD8 1548 aa11.38□□□□□ -0.59
CAB39-206ENST00000493540 PIK3C2BO00750 1634 aa11.38□□□□□ -0.59
CAB39-206ENST00000493540 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
CAB39-206ENST00000493540 PTPN23Q9H3S7 1636 aa11.37□□□□□ -0.59
CAB39-206ENST00000493540 ARHGAP31Q2M1Z3 1444 aa11.36□□□□□ -0.59
CAB39-206ENST00000493540 MYOM3Q5VTT5 1437 aa11.36□□□□□ -0.59
CAB39-206ENST00000493540 ILDR2Q71H61 639 aa11.36□□□□□ -0.59
CAB39-206ENST00000493540 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
CAB39-206ENST00000493540 LMTK2Q8IWU2 1503 aa11.35□□□□□ -0.59
CAB39-206ENST00000493540 RSPH4AQ5TD94 716 aa11.35□□□□□ -0.59
CAB39-206ENST00000493540 DISP3Q9P2K9 1392 aa11.34□□□□□ -0.59
CAB39-206ENST00000493540 NUBP1P53384 320 aa11.34□□□□□ -0.59
CAB39-206ENST00000493540 FARP1Q9Y4F1 1045 aaPredicted RBP11.34□□□□□ -0.59
CAB39-206ENST00000493540 ERBINQ96RT1 1412 aa11.34□□□□□ -0.59
CAB39-206ENST00000493540 NWD1Q149M9 1564 aa11.33□□□□□ -0.6
CAB39-206ENST00000493540 GGT6Q6P531 493 aa11.33□□□□□ -0.6
CAB39-206ENST00000493540 NPHP4O75161 1426 aaPredicted RBP11.33□□□□□ -0.6
CAB39-206ENST00000493540 GCC2Q8IWJ2 1684 aa11.33□□□□□ -0.6
CAB39-206ENST00000493540 EFCAB6Q5THR3 1501 aa11.32□□□□□ -0.6
CAB39-206ENST00000493540 LRRC7Q96NW7 1537 aa11.32□□□□□ -0.6
CAB39-206ENST00000493540 SOCS7O14512 581 aa11.32□□□□□ -0.6
CAB39-206ENST00000493540 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
CAB39-206ENST00000493540 CHD2O14647 1828 aaKnown RBP11.3□□□□□ -0.6
CAB39-206ENST00000493540 TET3O43151 1660 aa11.3□□□□□ -0.6
CAB39-206ENST00000493540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.29□□□□□ -0.6
CAB39-206ENST00000493540 KIF3BO15066 747 aa11.29□□□□□ -0.6
CAB39-206ENST00000493540 GSE1Q14687 1217 aa11.29□□□□□ -0.6
CAB39-206ENST00000493540 FBXO31Q5XUX0 539 aaPredicted RBP11.29□□□□□ -0.6
CAB39-206ENST00000493540 ADGRL2O95490 1459 aa11.29□□□□□ -0.6
CAB39-206ENST00000493540 SCAF11Q99590 1463 aaKnown RBP11.29□□□□□ -0.6
CAB39-206ENST00000493540 UNC13BO14795 1591 aa11.28□□□□□ -0.6
CAB39-206ENST00000493540 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
CAB39-206ENST00000493540 LHX8Q68G74 356 aa11.28□□□□□ -0.6
CAB39-206ENST00000493540 ADGRB3O60242 1522 aa11.28□□□□□ -0.6
CAB39-206ENST00000493540 ABCC5O15440 1437 aa11.27□□□□□ -0.6
CAB39-206ENST00000493540 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.61
CAB39-206ENST00000493540 DAPK1P53355 1430 aa11.26□□□□□ -0.61
CAB39-206ENST00000493540 GABBR2O75899 941 aa11.26□□□□□ -0.61
CAB39-206ENST00000493540 FAM212AQ96EL1 285 aa11.26□□□□□ -0.61
CAB39-206ENST00000493540 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
CAB39-206ENST00000493540 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
CAB39-206ENST00000493540 WASHC2CQ9Y4E1 1318 aa11.25□□□□□ -0.61
CAB39-206ENST00000493540 FGD6Q6ZV73 1430 aa11.25□□□□□ -0.61
CAB39-206ENST00000493540 KIF15Q9NS87 1388 aa11.24□□□□□ -0.61
CAB39-206ENST00000493540 NOS1P29475 1434 aa11.24□□□□□ -0.61
CAB39-206ENST00000493540 TMEM131LA2VDJ0 1609 aa11.24□□□□□ -0.61
CAB39-206ENST00000493540 E9PCH4 1651 aa11.24□□□□□ -0.61
CAB39-206ENST00000493540 UBAP1LF5GYI3 381 aa11.23□□□□□ -0.61
CAB39-206ENST00000493540 KANK4Q5T7N3 995 aaPredicted RBP11.23□□□□□ -0.61
CAB39-206ENST00000493540 RPRD2Q5VT52 1461 aaKnown RBP11.23□□□□□ -0.61
CAB39-206ENST00000493540 IQGAP3Q86VI3 1631 aa11.23□□□□□ -0.61
CAB39-206ENST00000493540 ROBO1Q9Y6N7 1651 aa11.23□□□□□ -0.61
CAB39-206ENST00000493540 NKTRP30414 1462 aaKnown RBP11.22□□□□□ -0.61
CAB39-206ENST00000493540 THEMISQ8N1K5 641 aaPredicted RBP11.22□□□□□ -0.61
CAB39-206ENST00000493540 ANKLE2Q86XL3 938 aa11.21□□□□□ -0.61
CAB39-206ENST00000493540 TSPY4P0CV99 314 aa11.19□□□□□ -0.62
CAB39-206ENST00000493540 TSPY10P0CW01 314 aa11.19□□□□□ -0.62
CAB39-206ENST00000493540 ZFYVE9O95405 1425 aa11.18□□□□□ -0.62
CAB39-206ENST00000493540 TMEM2Q9UHN6 1383 aa11.18□□□□□ -0.62
CAB39-206ENST00000493540 HSPA1LP34931 641 aa11.18□□□□□ -0.62
CAB39-206ENST00000493540 DIP2AQ14689 1571 aa11.18□□□□□ -0.62
CAB39-206ENST00000493540 SPHKAPQ2M3C7 1700 aa11.18□□□□□ -0.62
CAB39-206ENST00000493540 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
CAB39-206ENST00000493540 NRXN3Q9Y4C0 1643 aa11.17□□□□□ -0.62
CAB39-206ENST00000493540 XRN1Q8IZH2 1706 aaKnown RBP11.17□□□□□ -0.62
CAB39-206ENST00000493540 SETD1AO15047 1707 aaKnown RBP11.16□□□□□ -0.62
CAB39-206ENST00000493540 PHLPP1O60346 1717 aa11.16□□□□□ -0.62
CAB39-206ENST00000493540 TOM1O60784 492 aa11.16□□□□□ -0.62
CAB39-206ENST00000493540 TSPYL2Q9H2G4 693 aaPredicted RBP11.16□□□□□ -0.62
CAB39-206ENST00000493540 SHPRHQ149N8 1683 aa11.15□□□□□ -0.62
CAB39-206ENST00000493540 LTKP29376 864 aa11.14□□□□□ -0.63
CAB39-206ENST00000493540 FAM135BQ49AJ0 1406 aa11.14□□□□□ -0.63
CAB39-206ENST00000493540 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.14□□□□□ -0.63
CAB39-206ENST00000493540 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
CAB39-206ENST00000493540 ANKRD30AQ9BXX3 1397 aa11.13□□□□□ -0.63
CAB39-206ENST00000493540 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
CAB39-206ENST00000493540 NHSL1Q5SYE7 1610 aa11.12□□□□□ -0.63
CAB39-206ENST00000493540 AHDC1Q5TGY3 1603 aaPredicted RBP11.12□□□□□ -0.63
CAB39-206ENST00000493540 LAMC1P11047 1609 aa11.11□□□□□ -0.63
CAB39-206ENST00000493540 RGL2O15211 777 aa11.11□□□□□ -0.63
CAB39-206ENST00000493540 SETBP1Q9Y6X0 1596 aa11.1□□□□□ -0.63
CAB39-206ENST00000493540 ANKRD50Q9ULJ7 1429 aa11.09□□□□□ -0.63
CAB39-206ENST00000493540 KANK1Q14678 1352 aa11.09□□□□□ -0.63
CAB39-206ENST00000493540 NALCNQ8IZF0 1738 aa11.09□□□□□ -0.63
CAB39-206ENST00000493540 PLEKHG1Q9ULL1 1385 aa11.08□□□□□ -0.64
CAB39-206ENST00000493540 KIF1BO60333 1816 aa11.08□□□□□ -0.64
CAB39-206ENST00000493540 LOC105371045A0A1W2PR82 267 aa11.08□□□□□ -0.64
CAB39-206ENST00000493540 PYGBP11216 843 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms