RNA–Protein interactions for RNA: ENST00000493213.1

CDK16-207, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-207ENST00000493213 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
CDK16-207ENST00000493213 TXNDC2Q86VQ3 553 aa16.24■□□□□ 0.19
CDK16-207ENST00000493213 SLC52A1Q9NWF4 448 aa16.24■□□□□ 0.19
CDK16-207ENST00000493213 SYNMO15061 1565 aa16.24■□□□□ 0.19
CDK16-207ENST00000493213 TMEM2Q9UHN6 1383 aa16.24■□□□□ 0.19
CDK16-207ENST00000493213 RPRD2Q5VT52 1461 aaKnown RBP16.23■□□□□ 0.19
CDK16-207ENST00000493213 NOS1P29475 1434 aa16.23■□□□□ 0.19
CDK16-207ENST00000493213 LTKP29376 864 aa16.23■□□□□ 0.19
CDK16-207ENST00000493213 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
CDK16-207ENST00000493213 LRRC7Q96NW7 1537 aa16.22■□□□□ 0.19
CDK16-207ENST00000493213 ANKRD50Q9ULJ7 1429 aa16.21■□□□□ 0.19
CDK16-207ENST00000493213 POLA2Q14181 598 aa16.21■□□□□ 0.19
CDK16-207ENST00000493213 EFCAB6Q5THR3 1501 aa16.2■□□□□ 0.18
CDK16-207ENST00000493213 IDI1Q13907 227 aa16.2■□□□□ 0.18
CDK16-207ENST00000493213 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
CDK16-207ENST00000493213 PIK3C2BO00750 1634 aa16.19■□□□□ 0.18
CDK16-207ENST00000493213 CFAP65Q6ZU64 1925 aaKnown RBP16.19■□□□□ 0.18
CDK16-207ENST00000493213 ROCK1Q13464 1354 aa16.18■□□□□ 0.18
CDK16-207ENST00000493213 HSPA1LP34931 641 aa16.18■□□□□ 0.18
CDK16-207ENST00000493213 FAM50AQ14320 339 aaKnown RBP16.18■□□□□ 0.18
CDK16-207ENST00000493213 PIP4K2BP78356 416 aa16.17■□□□□ 0.18
CDK16-207ENST00000493213 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
CDK16-207ENST00000493213 ALKQ9UM73 1620 aa16.16■□□□□ 0.18
CDK16-207ENST00000493213 STRCP1A6NGW2 1772 aa16.16■□□□□ 0.18
CDK16-207ENST00000493213 HDGFP51858 240 aaKnown RBP16.16■□□□□ 0.18
CDK16-207ENST00000493213 KCNA6P17658 529 aa16.14■□□□□ 0.17
CDK16-207ENST00000493213 TET3O43151 1660 aa16.14■□□□□ 0.17
CDK16-207ENST00000493213 ADGRB3O60242 1522 aa16.14■□□□□ 0.17
CDK16-207ENST00000493213 UNC13BO14795 1591 aa16.11■□□□□ 0.17
CDK16-207ENST00000493213 GCC2Q8IWJ2 1684 aa16.09■□□□□ 0.17
CDK16-207ENST00000493213 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDK16-207ENST00000493213 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
CDK16-207ENST00000493213 PLEKHG1Q9ULL1 1385 aa16.08■□□□□ 0.16
CDK16-207ENST00000493213 ZFYVE9O95405 1425 aa16.08■□□□□ 0.16
CDK16-207ENST00000493213 NKTRP30414 1462 aaKnown RBP16.08■□□□□ 0.16
CDK16-207ENST00000493213 NWD1Q149M9 1564 aa16.06■□□□□ 0.16
CDK16-207ENST00000493213 IQGAP3Q86VI3 1631 aa16.05■□□□□ 0.16
CDK16-207ENST00000493213 NCOA3Q9Y6Q9 1424 aa16.05■□□□□ 0.16
CDK16-207ENST00000493213 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
CDK16-207ENST00000493213 TBX22Q9Y458 520 aa16.05■□□□□ 0.16
CDK16-207ENST00000493213 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
CDK16-207ENST00000493213 TMEM131LA2VDJ0 1609 aa16.05■□□□□ 0.16
CDK16-207ENST00000493213 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
CDK16-207ENST00000493213 SLC26A8Q96RN1 970 aa16.04■□□□□ 0.16
CDK16-207ENST00000493213 RIMS2Q9UQ26 1411 aa16.03■□□□□ 0.16
CDK16-207ENST00000493213 PIK3R4Q99570 1358 aa16.02■□□□□ 0.16
CDK16-207ENST00000493213 NUP155O75694 1391 aa16.01■□□□□ 0.15
CDK16-207ENST00000493213 PPP1R15AO75807 674 aaPredicted RBP16.01■□□□□ 0.15
CDK16-207ENST00000493213 E9PCH4 1651 aa16.01■□□□□ 0.15
CDK16-207ENST00000493213 DIP2AQ14689 1571 aa16■□□□□ 0.15
CDK16-207ENST00000493213 BCANQ96GW7 911 aa15.99■□□□□ 0.15
CDK16-207ENST00000493213 MSH6P52701 1360 aa15.99■□□□□ 0.15
CDK16-207ENST00000493213 CHD2O14647 1828 aaKnown RBP15.98■□□□□ 0.15
CDK16-207ENST00000493213 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
CDK16-207ENST00000493213 RRBP1Q9P2E9 1410 aaKnown RBP15.96■□□□□ 0.15
CDK16-207ENST00000493213 ADAMTS13Q76LX8 1427 aa15.95■□□□□ 0.14
CDK16-207ENST00000493213 SLAIN2Q9P270 581 aa15.95■□□□□ 0.14
CDK16-207ENST00000493213 MYO5BQ9ULV0 1848 aa15.95■□□□□ 0.14
CDK16-207ENST00000493213 CHGAP10645 457 aaKnown RBP15.94■□□□□ 0.14
CDK16-207ENST00000493213 RGS17Q9UGC6 210 aaPredicted RBP15.94■□□□□ 0.14
CDK16-207ENST00000493213 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
CDK16-207ENST00000493213 C19orf44Q9H6X5 657 aa15.92■□□□□ 0.14
CDK16-207ENST00000493213 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
CDK16-207ENST00000493213 TRPM2O94759 1503 aa15.91■□□□□ 0.14
CDK16-207ENST00000493213 ITGAEP38570 1179 aa15.91■□□□□ 0.14
CDK16-207ENST00000493213 CADPS2Q86UW7 1296 aa15.91■□□□□ 0.14
CDK16-207ENST00000493213 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
CDK16-207ENST00000493213 SETBP1Q9Y6X0 1596 aa15.88■□□□□ 0.13
CDK16-207ENST00000493213 NAIPQ13075 1403 aa15.88■□□□□ 0.13
CDK16-207ENST00000493213 DCCP43146 1447 aa15.87■□□□□ 0.13
CDK16-207ENST00000493213 RBM33Q96EV2 1170 aaKnown RBP15.87■□□□□ 0.13
CDK16-207ENST00000493213 AMOTL2Q9Y2J4 779 aa15.87■□□□□ 0.13
CDK16-207ENST00000493213 JCADQ9P266 1359 aa15.87■□□□□ 0.13
CDK16-207ENST00000493213 ATF3P18847 181 aa15.86■□□□□ 0.13
CDK16-207ENST00000493213 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
CDK16-207ENST00000493213 C14orf37Q86TY3 774 aa15.84■□□□□ 0.13
CDK16-207ENST00000493213 PTPRUQ92729 1446 aa15.84■□□□□ 0.13
CDK16-207ENST00000493213 ZNF326Q5BKZ1 582 aaKnown RBP15.83■□□□□ 0.12
CDK16-207ENST00000493213 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.12
CDK16-207ENST00000493213 PPARGC1BQ86YN6 1023 aaKnown RBP15.83■□□□□ 0.12
CDK16-207ENST00000493213 RPGRIP1LQ68CZ1 1315 aa15.83■□□□□ 0.12
CDK16-207ENST00000493213 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.82■□□□□ 0.12
CDK16-207ENST00000493213 CHRDL2Q6WN34 429 aa15.82■□□□□ 0.12
CDK16-207ENST00000493213 SPATA31A6Q5VVP1 1343 aa15.82■□□□□ 0.12
CDK16-207ENST00000493213 ACIN1Q9UKV3 1341 aaKnown RBP15.82■□□□□ 0.12
CDK16-207ENST00000493213 AHDC1Q5TGY3 1603 aaPredicted RBP15.82■□□□□ 0.12
CDK16-207ENST00000493213 NRXN3Q9Y4C0 1643 aa15.82■□□□□ 0.12
CDK16-207ENST00000493213 PHLPP1O60346 1717 aa15.82■□□□□ 0.12
CDK16-207ENST00000493213 VGFO15240 615 aaPredicted RBP15.81■□□□□ 0.12
CDK16-207ENST00000493213 POTEAQ6S8J7 498 aa15.81■□□□□ 0.12
CDK16-207ENST00000493213 XRN1Q8IZH2 1706 aaKnown RBP15.81■□□□□ 0.12
CDK16-207ENST00000493213 NEXMIFQ5QGS0 1516 aa15.8■□□□□ 0.12
CDK16-207ENST00000493213 CLTCL1P53675 1640 aa15.79■□□□□ 0.12
CDK16-207ENST00000493213 COL16A1Q07092 1604 aaPredicted RBP15.79■□□□□ 0.12
CDK16-207ENST00000493213 METP08581 1390 aa15.78■□□□□ 0.12
CDK16-207ENST00000493213 KIF1BO60333 1816 aa15.78■□□□□ 0.12
CDK16-207ENST00000493213 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.12
CDK16-207ENST00000493213 SETD1AO15047 1707 aaKnown RBP15.77■□□□□ 0.12
CDK16-207ENST00000493213 BRINP3Q76B58 766 aa15.76■□□□□ 0.11
CDK16-207ENST00000493213 ADGRL3Q9HAR2 1447 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms