RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 MYOM2P54296 1465 aa19.45■□□□□ 0.7
PTPN7-216ENST00000492977 AGLP35573 1532 aa19.44■□□□□ 0.7
PTPN7-216ENST00000492977 DMRT2Q9Y5R5 561 aa19.44■□□□□ 0.7
PTPN7-216ENST00000492977 CFAP65Q6ZU64 1925 aaKnown RBP19.43■□□□□ 0.7
PTPN7-216ENST00000492977 KIAA1210Q9ULL0 1709 aa19.43■□□□□ 0.7
PTPN7-216ENST00000492977 ADGRB3O60242 1522 aa19.42■□□□□ 0.7
PTPN7-216ENST00000492977 IFT172Q9UG01 1749 aa19.42■□□□□ 0.7
PTPN7-216ENST00000492977 MROH2AA6NES4 1674 aa19.4■□□□□ 0.7
PTPN7-216ENST00000492977 SIGLEC1Q9BZZ2 1709 aa19.39■□□□□ 0.69
PTPN7-216ENST00000492977 RPGRIP1LQ68CZ1 1315 aa19.39■□□□□ 0.69
PTPN7-216ENST00000492977 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
PTPN7-216ENST00000492977 PIK3C2BO00750 1634 aa19.39■□□□□ 0.69
PTPN7-216ENST00000492977 COL17A1Q9UMD9 1497 aaPredicted RBP19.38■□□□□ 0.69
PTPN7-216ENST00000492977 NRXN1Q9ULB1 1477 aa19.38■□□□□ 0.69
PTPN7-216ENST00000492977 PRKRIP1Q9H875 184 aaPredicted RBP19.37■□□□□ 0.69
PTPN7-216ENST00000492977 IQGAP1P46940 1657 aa19.37■□□□□ 0.69
PTPN7-216ENST00000492977 TESK2Q96S53 571 aa19.36■□□□□ 0.69
PTPN7-216ENST00000492977 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
PTPN7-216ENST00000492977 SYNMO15061 1565 aa19.36■□□□□ 0.69
PTPN7-216ENST00000492977 ARHGEF40Q8TER5 1519 aa19.36■□□□□ 0.69
PTPN7-216ENST00000492977 SLC52A1Q9NWF4 448 aa19.36■□□□□ 0.69
PTPN7-216ENST00000492977 SCAF11Q99590 1463 aaKnown RBP19.36■□□□□ 0.69
PTPN7-216ENST00000492977 CHGAP10645 457 aaKnown RBP19.35■□□□□ 0.69
PTPN7-216ENST00000492977 ADGRF5Q8IZF2 1346 aa19.34■□□□□ 0.69
PTPN7-216ENST00000492977 PPLO60437 1756 aa19.34■□□□□ 0.69
PTPN7-216ENST00000492977 PREX1Q8TCU6 1659 aa19.32■□□□□ 0.68
PTPN7-216ENST00000492977 TMF1P82094 1093 aa19.32■□□□□ 0.68
PTPN7-216ENST00000492977 EIF3AQ14152 1382 aaKnown RBP19.31■□□□□ 0.68
PTPN7-216ENST00000492977 IDI1Q13907 227 aa19.3■□□□□ 0.68
PTPN7-216ENST00000492977 CFAP70Q5T0N1 1121 aa19.3■□□□□ 0.68
PTPN7-216ENST00000492977 SLC24A1O60721 1099 aa19.29■□□□□ 0.68
PTPN7-216ENST00000492977 SETBP1Q9Y6X0 1596 aa19.28■□□□□ 0.68
PTPN7-216ENST00000492977 DISP3Q9P2K9 1392 aa19.28■□□□□ 0.68
PTPN7-216ENST00000492977 PIK3C2GO75747 1445 aa19.27■□□□□ 0.68
PTPN7-216ENST00000492977 VGFO15240 615 aaPredicted RBP19.27■□□□□ 0.67
PTPN7-216ENST00000492977 ERVK-7P63135 1459 aa19.26■□□□□ 0.67
PTPN7-216ENST00000492977 CDCA8Q53HL2 280 aa19.26■□□□□ 0.67
PTPN7-216ENST00000492977 C14orf93Q9H972 538 aaKnown RBP19.26■□□□□ 0.67
PTPN7-216ENST00000492977 CLTCQ00610 1675 aaKnown RBP19.25■□□□□ 0.67
PTPN7-216ENST00000492977 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
PTPN7-216ENST00000492977 KTN1Q86UP2 1357 aaKnown RBP19.25■□□□□ 0.67
PTPN7-216ENST00000492977 ZFYVE9O95405 1425 aa19.24■□□□□ 0.67
PTPN7-216ENST00000492977 GTF3C3Q9Y5Q9 886 aa19.24■□□□□ 0.67
PTPN7-216ENST00000492977 TMEM131LA2VDJ0 1609 aa19.23■□□□□ 0.67
PTPN7-216ENST00000492977 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
PTPN7-216ENST00000492977 FBXO31Q5XUX0 539 aaPredicted RBP19.22■□□□□ 0.67
PTPN7-216ENST00000492977 SPATA31D1Q6ZQQ2 1576 aa19.2■□□□□ 0.66
PTPN7-216ENST00000492977 MLECQ14165 292 aa19.19■□□□□ 0.66
PTPN7-216ENST00000492977 RALBP1Q15311 655 aa19.19■□□□□ 0.66
PTPN7-216ENST00000492977 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
PTPN7-216ENST00000492977 MYO3AQ8NEV4 1616 aa19.19■□□□□ 0.66
PTPN7-216ENST00000492977 PER1O15534 1290 aaPredicted RBP19.19■□□□□ 0.66
PTPN7-216ENST00000492977 CCDC184Q52MB2 194 aa19.19■□□□□ 0.66
PTPN7-216ENST00000492977 ESF1Q9H501 851 aaKnown RBP19.19■□□□□ 0.66
PTPN7-216ENST00000492977 MYO5BQ9ULV0 1848 aa19.18■□□□□ 0.66
PTPN7-216ENST00000492977 ADGRB1O14514 1584 aa19.18■□□□□ 0.66
PTPN7-216ENST00000492977 SBNO2Q9Y2G9 1366 aa19.18■□□□□ 0.66
PTPN7-216ENST00000492977 PANK3Q9H999 370 aa19.15■□□□□ 0.66
PTPN7-216ENST00000492977 ZMYM3Q14202 1370 aa19.15■□□□□ 0.66
PTPN7-216ENST00000492977 DNAJC5Q9H3Z4 198 aa19.14■□□□□ 0.65
PTPN7-216ENST00000492977 CENPJQ9HC77 1338 aaPredicted RBP19.13■□□□□ 0.65
PTPN7-216ENST00000492977 STAG3Q9UJ98 1225 aa19.13■□□□□ 0.65
PTPN7-216ENST00000492977 KDM5AP29375 1690 aaKnown RBP19.13■□□□□ 0.65
PTPN7-216ENST00000492977 MYBBP1AQ9BQG0 1328 aaKnown RBP19.12■□□□□ 0.65
PTPN7-216ENST00000492977 NUTM2DQ5VT03 806 aaPredicted RBP19.11■□□□□ 0.65
PTPN7-216ENST00000492977 PARD3Q8TEW0 1356 aa19.11■□□□□ 0.65
PTPN7-216ENST00000492977 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
PTPN7-216ENST00000492977 TMEM132EQ6IEE7 984 aa19.1■□□□□ 0.65
PTPN7-216ENST00000492977 TRAK1Q9UPV9 953 aa19.1■□□□□ 0.65
PTPN7-216ENST00000492977 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
PTPN7-216ENST00000492977 FAM9BQ8IZU0 186 aa19.1■□□□□ 0.65
PTPN7-216ENST00000492977 BRD4O60885 1362 aaPredicted RBP19.1■□□□□ 0.65
PTPN7-216ENST00000492977 A2ML1A8K2U0 1454 aa19.1■□□□□ 0.65
PTPN7-216ENST00000492977 CNGB1Q14028 1251 aaPredicted RBP19.09■□□□□ 0.65
PTPN7-216ENST00000492977 TMC1Q8TDI8 760 aa19.07■□□□□ 0.64
PTPN7-216ENST00000492977 MYOM1P52179 1685 aa19.07■□□□□ 0.64
PTPN7-216ENST00000492977 QRICH2Q9H0J4 1663 aa19.07■□□□□ 0.64
PTPN7-216ENST00000492977 KNSTRNQ9Y448 316 aa19.06■□□□□ 0.64
PTPN7-216ENST00000492977 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
PTPN7-216ENST00000492977 PUS7Q96PZ0 661 aaKnown RBP19.05■□□□□ 0.64
PTPN7-216ENST00000492977 ARHGEF28Q8N1W1 1705 aaKnown RBP19.05■□□□□ 0.64
PTPN7-216ENST00000492977 TNRQ92752 1358 aa19.04■□□□□ 0.64
PTPN7-216ENST00000492977 RIMS2Q9UQ26 1411 aa19.04■□□□□ 0.64
PTPN7-216ENST00000492977 PNISRQ8TF01 805 aaKnown RBP19.03■□□□□ 0.64
PTPN7-216ENST00000492977 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.02■□□□□ 0.64
PTPN7-216ENST00000492977 ALKQ9UM73 1620 aa19.02■□□□□ 0.64
PTPN7-216ENST00000492977 NPC1L1Q9UHC9 1359 aa19.02■□□□□ 0.64
PTPN7-216ENST00000492977 ASXL1Q8IXJ9 1541 aa19.02■□□□□ 0.64
PTPN7-216ENST00000492977 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.63
PTPN7-216ENST00000492977 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
PTPN7-216ENST00000492977 AMER1Q5JTC6 1135 aaPredicted RBP19■□□□□ 0.63
PTPN7-216ENST00000492977 ZBED9Q6R2W3 1325 aa18.99■□□□□ 0.63
PTPN7-216ENST00000492977 EVC2Q86UK5 1308 aa18.99■□□□□ 0.63
PTPN7-216ENST00000492977 YTHDC2Q9H6S0 1430 aaKnown RBP18.99■□□□□ 0.63
PTPN7-216ENST00000492977 LRPPRCP42704 1394 aaKnown RBP18.98■□□□□ 0.63
PTPN7-216ENST00000492977 MYCNP04198 464 aaPredicted RBP18.98■□□□□ 0.63
PTPN7-216ENST00000492977 PTPRMP28827 1452 aa18.96■□□□□ 0.63
PTPN7-216ENST00000492977 NLRP1Q9C000 1473 aa18.96■□□□□ 0.63
PTPN7-216ENST00000492977 STK26Q9P289 416 aa18.95■□□□□ 0.62
PTPN7-216ENST00000492977 UBR1Q8IWV7 1749 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms