RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
GPNMB-214ENST00000492858 FGD6Q6ZV73 1430 aa19.1■□□□□ 0.65
GPNMB-214ENST00000492858 ABCC5O15440 1437 aa19.09■□□□□ 0.65
GPNMB-214ENST00000492858 LMTK2Q8IWU2 1503 aa19.09■□□□□ 0.65
GPNMB-214ENST00000492858 NOS1P29475 1434 aa19.08■□□□□ 0.65
GPNMB-214ENST00000492858 RXRBP28702 533 aa19.07■□□□□ 0.64
GPNMB-214ENST00000492858 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
GPNMB-214ENST00000492858 SLC52A1Q9NWF4 448 aa19.06■□□□□ 0.64
GPNMB-214ENST00000492858 VPS8Q8N3P4 1428 aa19.06■□□□□ 0.64
GPNMB-214ENST00000492858 PLEKHG1Q9ULL1 1385 aa19.06■□□□□ 0.64
GPNMB-214ENST00000492858 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
GPNMB-214ENST00000492858 CROCC2H7BZ55 1655 aa19.05■□□□□ 0.64
GPNMB-214ENST00000492858 ZFYVE9O95405 1425 aa19.03■□□□□ 0.64
GPNMB-214ENST00000492858 NCOA3Q9Y6Q9 1424 aa19.03■□□□□ 0.64
GPNMB-214ENST00000492858 AHDC1Q5TGY3 1603 aaPredicted RBP19.03■□□□□ 0.64
GPNMB-214ENST00000492858 DAPK1P53355 1430 aa19.02■□□□□ 0.64
GPNMB-214ENST00000492858 NUTM2BA6NNL0 878 aaPredicted RBP19.02■□□□□ 0.64
GPNMB-214ENST00000492858 NUTM2EB1AL46 878 aaPredicted RBP19.02■□□□□ 0.64
GPNMB-214ENST00000492858 CADPS2Q86UW7 1296 aa19.02■□□□□ 0.64
GPNMB-214ENST00000492858 NUTM2AQ8IVF1 878 aaPredicted RBP19.02■□□□□ 0.64
GPNMB-214ENST00000492858 CHD2O14647 1828 aaKnown RBP19.02■□□□□ 0.63
GPNMB-214ENST00000492858 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
GPNMB-214ENST00000492858 RIMS2Q9UQ26 1411 aa19.01■□□□□ 0.63
GPNMB-214ENST00000492858 ATF3P18847 181 aa19.01■□□□□ 0.63
GPNMB-214ENST00000492858 CHIC2Q9UKJ5 165 aa19.01■□□□□ 0.63
GPNMB-214ENST00000492858 CDK12Q9NYV4 1490 aaPredicted RBP19.01■□□□□ 0.63
GPNMB-214ENST00000492858 C19orf44Q9H6X5 657 aa19■□□□□ 0.63
GPNMB-214ENST00000492858 TBX22Q9Y458 520 aa19■□□□□ 0.63
GPNMB-214ENST00000492858 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
GPNMB-214ENST00000492858 HDGFP51858 240 aaKnown RBP18.99■□□□□ 0.63
GPNMB-214ENST00000492858 PTPN23Q9H3S7 1636 aa18.99■□□□□ 0.63
GPNMB-214ENST00000492858 AFF2P51816 1311 aa18.98■□□□□ 0.63
GPNMB-214ENST00000492858 BRINP3Q76B58 766 aa18.96■□□□□ 0.63
GPNMB-214ENST00000492858 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.96■□□□□ 0.63
GPNMB-214ENST00000492858 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
GPNMB-214ENST00000492858 RPRD2Q5VT52 1461 aaKnown RBP18.94■□□□□ 0.62
GPNMB-214ENST00000492858 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
GPNMB-214ENST00000492858 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
GPNMB-214ENST00000492858 NUTM2DQ5VT03 806 aaPredicted RBP18.93■□□□□ 0.62
GPNMB-214ENST00000492858 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
GPNMB-214ENST00000492858 TMEM131LA2VDJ0 1609 aa18.92■□□□□ 0.62
GPNMB-214ENST00000492858 RGS12O14924 1447 aa18.92■□□□□ 0.62
GPNMB-214ENST00000492858 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
GPNMB-214ENST00000492858 MYO5BQ9ULV0 1848 aa18.92■□□□□ 0.62
GPNMB-214ENST00000492858 PIK3R4Q99570 1358 aa18.92■□□□□ 0.62
GPNMB-214ENST00000492858 C8orf37Q96NL8 207 aa18.9■□□□□ 0.62
GPNMB-214ENST00000492858 RBM6P78332 1123 aaKnown RBP18.89■□□□□ 0.61
GPNMB-214ENST00000492858 QTRT2Q9H974 415 aaKnown RBP18.89■□□□□ 0.61
GPNMB-214ENST00000492858 SETD5Q9C0A6 1442 aa18.89■□□□□ 0.61
GPNMB-214ENST00000492858 ASXL1Q8IXJ9 1541 aa18.89■□□□□ 0.61
GPNMB-214ENST00000492858 AMOTL2Q9Y2J4 779 aa18.88■□□□□ 0.61
GPNMB-214ENST00000492858 DCCP43146 1447 aa18.86■□□□□ 0.61
GPNMB-214ENST00000492858 PTPRUQ92729 1446 aa18.86■□□□□ 0.61
GPNMB-214ENST00000492858 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
GPNMB-214ENST00000492858 ADGRL2O95490 1459 aa18.85■□□□□ 0.61
GPNMB-214ENST00000492858 ANKRD50Q9ULJ7 1429 aa18.85■□□□□ 0.61
GPNMB-214ENST00000492858 TRPM2O94759 1503 aa18.84■□□□□ 0.61
GPNMB-214ENST00000492858 APLP2Q06481 763 aa18.83■□□□□ 0.6
GPNMB-214ENST00000492858 MST1RQ04912 1400 aa18.83■□□□□ 0.6
GPNMB-214ENST00000492858 PNPLA6Q8IY17 1366 aa18.82■□□□□ 0.6
GPNMB-214ENST00000492858 EP400Q96L91 3159 aa18.82■□□□□ 0.6
GPNMB-214ENST00000492858 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
GPNMB-214ENST00000492858 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
GPNMB-214ENST00000492858 NGLY1Q96IV0 654 aa18.81■□□□□ 0.6
GPNMB-214ENST00000492858 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
GPNMB-214ENST00000492858 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
GPNMB-214ENST00000492858 ADAMTS2O95450 1211 aa18.8■□□□□ 0.6
GPNMB-214ENST00000492858 UNC13BO14795 1591 aa18.78■□□□□ 0.6
GPNMB-214ENST00000492858 ZRANB1Q9UGI0 708 aa18.78■□□□□ 0.6
GPNMB-214ENST00000492858 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
GPNMB-214ENST00000492858 FOXD1Q16676 465 aa18.76■□□□□ 0.59
GPNMB-214ENST00000492858 XRN1Q8IZH2 1706 aaKnown RBP18.76■□□□□ 0.59
GPNMB-214ENST00000492858 E9PCH4 1651 aa18.74■□□□□ 0.59
GPNMB-214ENST00000492858 USP21Q9UK80 565 aa18.74■□□□□ 0.59
GPNMB-214ENST00000492858 ADGRL3Q9HAR2 1447 aa18.73■□□□□ 0.59
GPNMB-214ENST00000492858 METP08581 1390 aa18.72■□□□□ 0.59
GPNMB-214ENST00000492858 TRPC5Q9UL62 973 aaPredicted RBP18.72■□□□□ 0.59
GPNMB-214ENST00000492858 SETBP1Q9Y6X0 1596 aa18.72■□□□□ 0.59
GPNMB-214ENST00000492858 NRXN3Q9Y4C0 1643 aa18.71■□□□□ 0.58
GPNMB-214ENST00000492858 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
GPNMB-214ENST00000492858 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
GPNMB-214ENST00000492858 ATRNO75882 1429 aa18.67■□□□□ 0.58
GPNMB-214ENST00000492858 ZNF326Q5BKZ1 582 aaKnown RBP18.67■□□□□ 0.58
GPNMB-214ENST00000492858 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
GPNMB-214ENST00000492858 NALCNQ8IZF0 1738 aa18.66■□□□□ 0.58
GPNMB-214ENST00000492858 SOS2Q07890 1332 aaPredicted RBP18.66■□□□□ 0.58
GPNMB-214ENST00000492858 IQGAP3Q86VI3 1631 aa18.66■□□□□ 0.58
GPNMB-214ENST00000492858 CCDC125Q86Z20 511 aa18.65■□□□□ 0.58
GPNMB-214ENST00000492858 ORAI2Q96SN7 254 aa18.65■□□□□ 0.58
GPNMB-214ENST00000492858 NUP155O75694 1391 aa18.65■□□□□ 0.58
GPNMB-214ENST00000492858 LAMC1P11047 1609 aa18.62■□□□□ 0.57
GPNMB-214ENST00000492858 BCL9LQ86UU0 1499 aa18.58■□□□□ 0.57
GPNMB-214ENST00000492858 ROCK1Q13464 1354 aa18.58■□□□□ 0.57
GPNMB-214ENST00000492858 MYOM2P54296 1465 aa18.58■□□□□ 0.56
GPNMB-214ENST00000492858 GJD4Q96KN9 370 aaPredicted RBP18.57■□□□□ 0.56
GPNMB-214ENST00000492858 COL22A1Q8NFW1 1626 aaPredicted RBP18.56■□□□□ 0.56
GPNMB-214ENST00000492858 ROBO2Q9HCK4 1378 aa18.56■□□□□ 0.56
GPNMB-214ENST00000492858 NEXMIFQ5QGS0 1516 aa18.55■□□□□ 0.56
GPNMB-214ENST00000492858 BLMP54132 1417 aaPredicted RBP18.54■□□□□ 0.56
GPNMB-214ENST00000492858 SPHKAPQ2M3C7 1700 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms