RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 MYOM3Q5VTT5 1437 aa13.93□□□□□ -0.18
CSMD3-206ENST00000492692 SUPT6HQ7KZ85 1726 aaKnown RBP13.93□□□□□ -0.18
CSMD3-206ENST00000492692 HSP90AB3PQ58FF7 597 aa13.93□□□□□ -0.18
CSMD3-206ENST00000492692 RRP1P56182 461 aaKnown RBP13.92□□□□□ -0.18
CSMD3-206ENST00000492692 CERS3Q8IU89 383 aa13.92□□□□□ -0.18
CSMD3-206ENST00000492692 FAM9BQ8IZU0 186 aa13.92□□□□□ -0.18
CSMD3-206ENST00000492692 GTF2F1P35269 517 aaKnown RBP eCLIP13.92□□□□□ -0.18
CSMD3-206ENST00000492692 AEBP1Q8IUX7 1158 aa13.92□□□□□ -0.18
CSMD3-206ENST00000492692 KTN1Q86UP2 1357 aaKnown RBP13.92□□□□□ -0.18
CSMD3-206ENST00000492692 CBX1P83916 185 aa13.91□□□□□ -0.18
CSMD3-206ENST00000492692 ZNF592Q92610 1267 aa13.91□□□□□ -0.18
CSMD3-206ENST00000492692 TCOF1Q13428 1488 aaKnown RBP13.91□□□□□ -0.18
CSMD3-206ENST00000492692 TRAK2O60296 914 aa13.9□□□□□ -0.18
CSMD3-206ENST00000492692 C8orf34Q49A92 452 aa13.9□□□□□ -0.18
CSMD3-206ENST00000492692 MYRIPQ8NFW9 859 aa13.9□□□□□ -0.18
CSMD3-206ENST00000492692 CALCOCO1Q9P1Z2 691 aa13.9□□□□□ -0.18
CSMD3-206ENST00000492692 NOL7Q9UMY1 257 aaKnown RBP13.9□□□□□ -0.18
CSMD3-206ENST00000492692 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
CSMD3-206ENST00000492692 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
CSMD3-206ENST00000492692 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.18
CSMD3-206ENST00000492692 LMOD3Q0VAK6 560 aa13.9□□□□□ -0.18
CSMD3-206ENST00000492692 CUL7Q14999 1698 aa13.9□□□□□ -0.18
CSMD3-206ENST00000492692 IBTKQ9P2D0 1353 aaPredicted RBP13.9□□□□□ -0.18
CSMD3-206ENST00000492692 FHOD3Q2V2M9 1422 aa13.89□□□□□ -0.19
CSMD3-206ENST00000492692 SPATA31E1Q6ZUB1 1445 aa13.89□□□□□ -0.19
CSMD3-206ENST00000492692 MFAP1P55081 439 aaKnown RBP13.89□□□□□ -0.19
CSMD3-206ENST00000492692 CTR9Q6PD62 1173 aa13.89□□□□□ -0.19
CSMD3-206ENST00000492692 ZNF771Q7L3S4 317 aaPredicted RBP13.89□□□□□ -0.19
CSMD3-206ENST00000492692 ARHGEF11O15085 1522 aa13.88□□□□□ -0.19
CSMD3-206ENST00000492692 DDX11L8A8MPP1 907 aa13.88□□□□□ -0.19
CSMD3-206ENST00000492692 SATB1Q01826 763 aa13.88□□□□□ -0.19
CSMD3-206ENST00000492692 BANK1Q8NDB2 785 aa13.88□□□□□ -0.19
CSMD3-206ENST00000492692 MYCBPQ99417 103 aaPredicted RBP13.88□□□□□ -0.19
CSMD3-206ENST00000492692 FEZ1Q99689 392 aa13.88□□□□□ -0.19
CSMD3-206ENST00000492692 CREBRFQ8IUR6 639 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 EXOC6Q8TAG9 804 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 PUS7Q96PZ0 661 aaKnown RBP13.87□□□□□ -0.19
CSMD3-206ENST00000492692 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
CSMD3-206ENST00000492692 MIA2Q96PC5 1412 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 MTUS2Q5JR59 1369 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 TRIM6-TRIM34B2RNG4 842 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 CAPN2P17655 700 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
CSMD3-206ENST00000492692 ATP2B3Q16720 1220 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 PRIMPOLQ96LW4 560 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 TRIM34Q9BYJ4 488 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 SENP3Q9H4L4 574 aaPredicted RBP13.87□□□□□ -0.19
CSMD3-206ENST00000492692 RAI14Q9P0K7 980 aa13.87□□□□□ -0.19
CSMD3-206ENST00000492692 NBPF11Q86T75 865 aa13.86□□□□□ -0.19
CSMD3-206ENST00000492692 P3H3Q8IVL6 736 aa13.86□□□□□ -0.19
CSMD3-206ENST00000492692 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
CSMD3-206ENST00000492692 BRPF1P55201 1214 aaPredicted RBP13.85□□□□□ -0.19
CSMD3-206ENST00000492692 CEP83Q9Y592 693 aa13.85□□□□□ -0.19
CSMD3-206ENST00000492692 CFAP65Q6ZU64 1925 aaKnown RBP13.85□□□□□ -0.19
CSMD3-206ENST00000492692 HMGN5P82970 282 aaKnown RBP13.85□□□□□ -0.19
CSMD3-206ENST00000492692 NCAPGQ9BPX3 1015 aa13.85□□□□□ -0.19
CSMD3-206ENST00000492692 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
CSMD3-206ENST00000492692 ZNF710Q8N1W2 664 aa13.84□□□□□ -0.19
CSMD3-206ENST00000492692 SAMD9Q5K651 1589 aa13.83□□□□□ -0.19
CSMD3-206ENST00000492692 RPRD2Q5VT52 1461 aaKnown RBP13.83□□□□□ -0.2
CSMD3-206ENST00000492692 LRRIQ1Q96JM4 1722 aa13.83□□□□□ -0.2
CSMD3-206ENST00000492692 KIF7Q2M1P5 1343 aa13.83□□□□□ -0.2
CSMD3-206ENST00000492692 RAD50Q92878 1312 aa13.83□□□□□ -0.2
CSMD3-206ENST00000492692 BRMS1Q9HCU9 246 aa13.83□□□□□ -0.2
CSMD3-206ENST00000492692 GRIN2BQ13224 1484 aa13.82□□□□□ -0.2
CSMD3-206ENST00000492692 KDM2BQ8NHM5 1336 aa13.82□□□□□ -0.2
CSMD3-206ENST00000492692 TTC36A6NLP5 189 aa13.82□□□□□ -0.2
CSMD3-206ENST00000492692 DHX29Q7Z478 1369 aaKnown RBP13.82□□□□□ -0.2
CSMD3-206ENST00000492692 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
CSMD3-206ENST00000492692 IGSF3O75054 1194 aa13.81□□□□□ -0.2
CSMD3-206ENST00000492692 HSP90AB1P08238 724 aaKnown RBP13.81□□□□□ -0.2
CSMD3-206ENST00000492692 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
CSMD3-206ENST00000492692 SKOR2Q2VWA4 1001 aaPredicted RBP13.81□□□□□ -0.2
CSMD3-206ENST00000492692 SIRT1Q96EB6 747 aa13.81□□□□□ -0.2
CSMD3-206ENST00000492692 PSMD1Q99460 953 aa13.81□□□□□ -0.2
CSMD3-206ENST00000492692 OGFRQ9NZT2 677 aa13.81□□□□□ -0.2
CSMD3-206ENST00000492692 TEX14Q8IWB6 1497 aa13.81□□□□□ -0.2
CSMD3-206ENST00000492692 L3MBTL2Q969R5 705 aa13.8□□□□□ -0.2
CSMD3-206ENST00000492692 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
CSMD3-206ENST00000492692 SH3BP1Q9Y3L3 701 aa13.8□□□□□ -0.2
CSMD3-206ENST00000492692 CCDC172P0C7W6 258 aa13.8□□□□□ -0.2
CSMD3-206ENST00000492692 TMEM132AQ24JP5 1023 aa13.8□□□□□ -0.2
CSMD3-206ENST00000492692 ZKSCAN5Q9Y2L8 839 aa13.8□□□□□ -0.2
CSMD3-206ENST00000492692 ROCK2O75116 1388 aaKnown RBP13.79□□□□□ -0.2
CSMD3-206ENST00000492692 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
CSMD3-206ENST00000492692 NBPF9Q3BBW0 867 aa13.79□□□□□ -0.2
CSMD3-206ENST00000492692 CENPQQ7L2Z9 268 aaPredicted RBP13.79□□□□□ -0.2
CSMD3-206ENST00000492692 CHMP4CQ96CF2 233 aa13.79□□□□□ -0.2
CSMD3-206ENST00000492692 GZF1Q9H116 711 aaPredicted RBP13.79□□□□□ -0.2
CSMD3-206ENST00000492692 FEZ2Q9UHY8 353 aaPredicted RBP13.79□□□□□ -0.2
CSMD3-206ENST00000492692 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
CSMD3-206ENST00000492692 ATP1B4Q9UN42 357 aaPredicted RBP13.78□□□□□ -0.2
CSMD3-206ENST00000492692 USP19O94966 1318 aa13.78□□□□□ -0.2
CSMD3-206ENST00000492692 ANKRD30BQ9BXX2 1392 aa13.78□□□□□ -0.2
CSMD3-206ENST00000492692 SLFN14P0C7P3 912 aa13.78□□□□□ -0.2
CSMD3-206ENST00000492692 NOP2P46087 812 aaKnown RBP13.78□□□□□ -0.2
CSMD3-206ENST00000492692 MAP2K1Q02750 393 aaPredicted RBP13.78□□□□□ -0.2
CSMD3-206ENST00000492692 PDLIM2Q96JY6 352 aa13.78□□□□□ -0.2
CSMD3-206ENST00000492692 RBM28Q9NW13 759 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms