RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 CLUAP1Q96AJ1 413 aa5.16□□□□□ -1.58
SNX13-209ENST00000492626 RBM46Q8TBY0 533 aaKnown RBP5.16□□□□□ -1.58
SNX13-209ENST00000492626 CFAP43Q8NDM7 1665 aa5.16□□□□□ -1.58
SNX13-209ENST00000492626 MS4A1P11836 297 aa5.15□□□□□ -1.58
SNX13-209ENST00000492626 TRIM26Q12899 539 aaPredicted RBP5.15□□□□□ -1.58
SNX13-209ENST00000492626 PTCD2Q8WV60 388 aaKnown RBP5.15□□□□□ -1.58
SNX13-209ENST00000492626 PHLDB1Q86UU1 1377 aa5.15□□□□□ -1.59
SNX13-209ENST00000492626 PDE4CQ08493 712 aa5.15□□□□□ -1.59
SNX13-209ENST00000492626 ZNF777Q9ULD5 760 aaPredicted RBP5.15□□□□□ -1.59
SNX13-209ENST00000492626 TOPBP1Q92547 1522 aa5.15□□□□□ -1.59
SNX13-209ENST00000492626 MCM6Q14566 821 aa5.14□□□□□ -1.59
SNX13-209ENST00000492626 CLK2P49760 499 aaKnown RBP5.14□□□□□ -1.59
SNX13-209ENST00000492626 NUTM1Q86Y26 1132 aa5.14□□□□□ -1.59
SNX13-209ENST00000492626 SLC39A7Q92504 469 aa5.14□□□□□ -1.59
SNX13-209ENST00000492626 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.14□□□□□ -1.59
SNX13-209ENST00000492626 ASTLQ6HA08 431 aaPredicted RBP5.14□□□□□ -1.59
SNX13-209ENST00000492626 NPM2Q86SE8 214 aaKnown RBP5.14□□□□□ -1.59
SNX13-209ENST00000492626 LTBP4Q8N2S1 1624 aa5.13□□□□□ -1.59
SNX13-209ENST00000492626 GRIN2BQ13224 1484 aa5.13□□□□□ -1.59
SNX13-209ENST00000492626 SPDYE5A6NIY4 337 aa5.13□□□□□ -1.59
SNX13-209ENST00000492626 TMEM259Q4ZIN3 620 aa5.13□□□□□ -1.59
SNX13-209ENST00000492626 PTPRTO14522 1441 aa5.13□□□□□ -1.59
SNX13-209ENST00000492626 ACIN1Q9UKV3 1341 aaKnown RBP5.13□□□□□ -1.59
SNX13-209ENST00000492626 KCTD17Q8N5Z5 321 aa5.13□□□□□ -1.59
SNX13-209ENST00000492626 CDHR5Q9HBB8 845 aa5.13□□□□□ -1.59
SNX13-209ENST00000492626 ZNF330Q9Y3S2 320 aaPredicted RBP5.13□□□□□ -1.59
SNX13-209ENST00000492626 RIMBP2O15034 1052 aa5.12□□□□□ -1.59
SNX13-209ENST00000492626 RSPH4AQ5TD94 716 aa5.12□□□□□ -1.59
SNX13-209ENST00000492626 SULF1Q8IWU6 871 aa5.12□□□□□ -1.59
SNX13-209ENST00000492626 CEP170Q5SW79 1584 aa5.12□□□□□ -1.59
SNX13-209ENST00000492626 C7P10643 843 aa5.12□□□□□ -1.59
SNX13-209ENST00000492626 BANK1Q8NDB2 785 aa5.12□□□□□ -1.59
SNX13-209ENST00000492626 KCNH8Q96L42 1107 aa5.12□□□□□ -1.59
SNX13-209ENST00000492626 NUP160Q12769 1436 aa5.11□□□□□ -1.59
SNX13-209ENST00000492626 PLB1Q6P1J6 1458 aa5.11□□□□□ -1.59
SNX13-209ENST00000492626 SLC34A2O95436 690 aa5.11□□□□□ -1.59
SNX13-209ENST00000492626 ZNF454Q8N9F8 522 aa5.11□□□□□ -1.59
SNX13-209ENST00000492626 ANO8Q9HCE9 1232 aaPredicted RBP5.11□□□□□ -1.59
SNX13-209ENST00000492626 FAM217BQ9NTX9 383 aaPredicted RBP5.11□□□□□ -1.59
SNX13-209ENST00000492626 JPH4Q96JJ6 628 aa5.11□□□□□ -1.59
SNX13-209ENST00000492626 C1orf115Q9H7X2 142 aa5.11□□□□□ -1.59
SNX13-209ENST00000492626 EPRSP07814 1512 aaKnown RBP5.1□□□□□ -1.59
SNX13-209ENST00000492626 SLC4A3P48751 1232 aa5.1□□□□□ -1.59
SNX13-209ENST00000492626 METTL3Q86U44 580 aaKnown RBP5.1□□□□□ -1.59
SNX13-209ENST00000492626 PREX1Q8TCU6 1659 aa5.1□□□□□ -1.59
SNX13-209ENST00000492626 ZDHHC16Q969W1 377 aa5.1□□□□□ -1.59
SNX13-209ENST00000492626 PADI6Q6TGC4 694 aa5.1□□□□□ -1.59
SNX13-209ENST00000492626 AEBP1Q8IUX7 1158 aa5.1□□□□□ -1.59
SNX13-209ENST00000492626 PCDHGA10Q9Y5H3 936 aa5.1□□□□□ -1.59
SNX13-209ENST00000492626 UHRF1BP1LA0JNW5 1464 aa5.1□□□□□ -1.59
SNX13-209ENST00000492626 NUTM2BA6NNL0 878 aaPredicted RBP5.09□□□□□ -1.59
SNX13-209ENST00000492626 NUTM2EB1AL46 878 aaPredicted RBP5.09□□□□□ -1.59
SNX13-209ENST00000492626 NUTM2DQ5VT03 806 aaPredicted RBP5.09□□□□□ -1.59
SNX13-209ENST00000492626 NUTM2AQ8IVF1 878 aaPredicted RBP5.09□□□□□ -1.59
SNX13-209ENST00000492626 PROCA1Q8NCQ7 364 aaPredicted RBP5.09□□□□□ -1.59
SNX13-209ENST00000492626 BCORL1Q5H9F3 1711 aa5.09□□□□□ -1.59
SNX13-209ENST00000492626 TMEM92Q6UXU6 159 aa5.09□□□□□ -1.59
SNX13-209ENST00000492626 CALR3Q96L12 384 aaKnown RBP5.09□□□□□ -1.59
SNX13-209ENST00000492626 REPIN1Q9BWE0 567 aaKnown RBP5.09□□□□□ -1.59
SNX13-209ENST00000492626 TBC1D2Q9BYX2 928 aa5.09□□□□□ -1.59
SNX13-209ENST00000492626 TSR1Q2NL82 804 aaKnown RBP5.09□□□□□ -1.6
SNX13-209ENST00000492626 MYSM1Q5VVJ2 828 aa5.09□□□□□ -1.6
SNX13-209ENST00000492626 ILDR2Q71H61 639 aa5.09□□□□□ -1.6
SNX13-209ENST00000492626 PCDHGA4Q9Y5G9 962 aa5.09□□□□□ -1.6
SNX13-209ENST00000492626 ONECUT3O60422 494 aaPredicted RBP5.08□□□□□ -1.6
SNX13-209ENST00000492626 RBM27Q9P2N5 1060 aaKnown RBP5.08□□□□□ -1.6
SNX13-209ENST00000492626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.08□□□□□ -1.6
SNX13-209ENST00000492626 CSPP1Q1MSJ5 1256 aa5.08□□□□□ -1.6
SNX13-209ENST00000492626 C6orf132Q5T0Z8 1188 aa5.08□□□□□ -1.6
SNX13-209ENST00000492626 MED1Q15648 1581 aaPredicted RBP5.08□□□□□ -1.6
SNX13-209ENST00000492626 RFC5P40937 340 aa5.08□□□□□ -1.6
SNX13-209ENST00000492626 ABL2P42684 1182 aa5.08□□□□□ -1.6
SNX13-209ENST00000492626 PXYLP1Q8TE99 480 aa5.07□□□□□ -1.6
SNX13-209ENST00000492626 PATL2C9JE40 543 aaKnown RBP5.07□□□□□ -1.6
SNX13-209ENST00000492626 PRIM1P49642 420 aaKnown RBP5.07□□□□□ -1.6
SNX13-209ENST00000492626 ZNF710Q8N1W2 664 aa5.07□□□□□ -1.6
SNX13-209ENST00000492626 MYT1LQ9UL68 1186 aa5.07□□□□□ -1.6
SNX13-209ENST00000492626 DOK7Q18PE1 504 aa5.07□□□□□ -1.6
SNX13-209ENST00000492626 ADGRG1Q9Y653 693 aa5.07□□□□□ -1.6
SNX13-209ENST00000492626 ABCA5Q8WWZ7 1642 aa5.07□□□□□ -1.6
SNX13-209ENST00000492626 MAGI3Q5TCQ9 1506 aa5.07□□□□□ -1.6
SNX13-209ENST00000492626 PPP1R15AO75807 674 aaPredicted RBP5.06□□□□□ -1.6
SNX13-209ENST00000492626 HDGFP51858 240 aaKnown RBP5.06□□□□□ -1.6
SNX13-209ENST00000492626 FAM161AQ3B820 660 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 NLRP7Q8WX94 980 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 NPDC1Q9NQX5 325 aaPredicted RBP5.06□□□□□ -1.6
SNX13-209ENST00000492626 METRNQ9UJH8 293 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 NBPF26B4DH59 902 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 AP1G2O75843 785 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 RIC3Q7Z5B4 369 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 RDH13Q8NBN7 331 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 MROH2BQ7Z745 1585 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 PSDA5PKW4 1024 aaPredicted RBP5.06□□□□□ -1.6
SNX13-209ENST00000492626 DDX11L8A8MPP1 907 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 TMUB1Q9BVT8 246 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 COG6Q9Y2V7 657 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 PRSS12P56730 875 aa5.06□□□□□ -1.6
SNX13-209ENST00000492626 FOSBP53539 338 aa5.05□□□□□ -1.6
SNX13-209ENST00000492626 COLQQ9Y215 455 aaPredicted RBP5.05□□□□□ -1.6
SNX13-209ENST00000492626 PPP4R3BQ5MIZ7 849 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms