RNA–Protein interactions for RNA: ENST00000492391.1

RP9-204, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 3

Gene RP9, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-204ENST00000492391 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.35
RP9-204ENST00000492391 SPHKAPQ2M3C7 1700 aa12.89□□□□□ -0.35
RP9-204ENST00000492391 RPRD2Q5VT52 1461 aaKnown RBP12.89□□□□□ -0.35
RP9-204ENST00000492391 NLRP1Q9C000 1473 aa12.89□□□□□ -0.35
RP9-204ENST00000492391 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
RP9-204ENST00000492391 PTPRTO14522 1441 aa12.88□□□□□ -0.35
RP9-204ENST00000492391 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
RP9-204ENST00000492391 KDM5AP29375 1690 aaKnown RBP12.87□□□□□ -0.35
RP9-204ENST00000492391 TMEM131LA2VDJ0 1609 aa12.87□□□□□ -0.35
RP9-204ENST00000492391 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
RP9-204ENST00000492391 ARHGAP23Q9P227 1491 aa12.85□□□□□ -0.35
RP9-204ENST00000492391 RAB3GAP2Q9H2M9 1393 aa12.85□□□□□ -0.35
RP9-204ENST00000492391 CLTCL1P53675 1640 aa12.84□□□□□ -0.35
RP9-204ENST00000492391 LTKP29376 864 aa12.84□□□□□ -0.35
RP9-204ENST00000492391 SLIT1O75093 1534 aa12.83□□□□□ -0.35
RP9-204ENST00000492391 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
RP9-204ENST00000492391 PKD2Q13563 968 aa12.82□□□□□ -0.36
RP9-204ENST00000492391 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
RP9-204ENST00000492391 TRIM52Q96A61 297 aa12.81□□□□□ -0.36
RP9-204ENST00000492391 MPHOSPH9Q99550 1183 aa12.81□□□□□ -0.36
RP9-204ENST00000492391 ADGRB3O60242 1522 aa12.81□□□□□ -0.36
RP9-204ENST00000492391 MED14O60244 1454 aa12.8□□□□□ -0.36
RP9-204ENST00000492391 TRPM2O94759 1503 aa12.8□□□□□ -0.36
RP9-204ENST00000492391 THEMISQ8N1K5 641 aaPredicted RBP12.8□□□□□ -0.36
RP9-204ENST00000492391 SLC52A1Q9NWF4 448 aa12.8□□□□□ -0.36
RP9-204ENST00000492391 LTBP4Q8N2S1 1624 aa12.8□□□□□ -0.36
RP9-204ENST00000492391 ZFYVE9O95405 1425 aa12.79□□□□□ -0.36
RP9-204ENST00000492391 TMEM2Q9UHN6 1383 aa12.79□□□□□ -0.36
RP9-204ENST00000492391 KIF1BO60333 1816 aa12.78□□□□□ -0.36
RP9-204ENST00000492391 IQGAP1P46940 1657 aa12.77□□□□□ -0.36
RP9-204ENST00000492391 HRCP23327 699 aa12.77□□□□□ -0.37
RP9-204ENST00000492391 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
RP9-204ENST00000492391 ANKLE2Q86XL3 938 aa12.75□□□□□ -0.37
RP9-204ENST00000492391 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
RP9-204ENST00000492391 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
RP9-204ENST00000492391 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
RP9-204ENST00000492391 TXNDC2Q86VQ3 553 aa12.74□□□□□ -0.37
RP9-204ENST00000492391 XIRP1Q702N8 1843 aaKnown RBP12.74□□□□□ -0.37
RP9-204ENST00000492391 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
RP9-204ENST00000492391 ZNF335Q9H4Z2 1342 aaPredicted RBP12.73□□□□□ -0.37
RP9-204ENST00000492391 PPLO60437 1756 aa12.73□□□□□ -0.37
RP9-204ENST00000492391 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
RP9-204ENST00000492391 SPATA31E1Q6ZUB1 1445 aa12.72□□□□□ -0.37
RP9-204ENST00000492391 ANKRD30BQ9BXX2 1392 aa12.72□□□□□ -0.37
RP9-204ENST00000492391 IFT172Q9UG01 1749 aa12.72□□□□□ -0.37
RP9-204ENST00000492391 NUTM2DQ5VT03 806 aaPredicted RBP12.72□□□□□ -0.37
RP9-204ENST00000492391 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.37
RP9-204ENST00000492391 CHD2O14647 1828 aaKnown RBP12.71□□□□□ -0.38
RP9-204ENST00000492391 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
RP9-204ENST00000492391 SETD1AO15047 1707 aaKnown RBP12.7□□□□□ -0.38
RP9-204ENST00000492391 ADAMTS13Q76LX8 1427 aa12.7□□□□□ -0.38
RP9-204ENST00000492391 CHGAP10645 457 aaKnown RBP12.68□□□□□ -0.38
RP9-204ENST00000492391 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
RP9-204ENST00000492391 SLC26A8Q96RN1 970 aa12.67□□□□□ -0.38
RP9-204ENST00000492391 ALKQ9UM73 1620 aa12.66□□□□□ -0.38
RP9-204ENST00000492391 CERKQ8TCT0 537 aa12.66□□□□□ -0.38
RP9-204ENST00000492391 PLEKHG1Q9ULL1 1385 aa12.66□□□□□ -0.38
RP9-204ENST00000492391 SETBP1Q9Y6X0 1596 aa12.64□□□□□ -0.39
RP9-204ENST00000492391 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
RP9-204ENST00000492391 EID1Q9Y6B2 187 aa12.64□□□□□ -0.39
RP9-204ENST00000492391 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
RP9-204ENST00000492391 CCDC144AA2RUR9 1427 aa12.63□□□□□ -0.39
RP9-204ENST00000492391 PTPRUQ92729 1446 aa12.63□□□□□ -0.39
RP9-204ENST00000492391 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
RP9-204ENST00000492391 NWD1Q149M9 1564 aa12.62□□□□□ -0.39
RP9-204ENST00000492391 DHX57Q6P158 1386 aaKnown RBP12.62□□□□□ -0.39
RP9-204ENST00000492391 ADGRF5Q8IZF2 1346 aa12.62□□□□□ -0.39
RP9-204ENST00000492391 RGL3Q3MIN7 710 aa12.61□□□□□ -0.39
RP9-204ENST00000492391 TBX22Q9Y458 520 aa12.61□□□□□ -0.39
RP9-204ENST00000492391 METP08581 1390 aa12.6□□□□□ -0.39
RP9-204ENST00000492391 XRN1Q8IZH2 1706 aaKnown RBP12.59□□□□□ -0.39
RP9-204ENST00000492391 ZNF326Q5BKZ1 582 aaKnown RBP12.59□□□□□ -0.39
RP9-204ENST00000492391 ILDR1Q86SU0 546 aaPredicted RBP12.59□□□□□ -0.39
RP9-204ENST00000492391 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.59□□□□□ -0.39
RP9-204ENST00000492391 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
RP9-204ENST00000492391 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
RP9-204ENST00000492391 CPS1P31327 1500 aa12.58□□□□□ -0.4
RP9-204ENST00000492391 ASXL1Q8IXJ9 1541 aa12.58□□□□□ -0.4
RP9-204ENST00000492391 KCNA6P17658 529 aa12.58□□□□□ -0.4
RP9-204ENST00000492391 RBM33Q96EV2 1170 aaKnown RBP12.58□□□□□ -0.4
RP9-204ENST00000492391 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
RP9-204ENST00000492391 DIP2AQ14689 1571 aa12.57□□□□□ -0.4
RP9-204ENST00000492391 SIN3AQ96ST3 1273 aa12.57□□□□□ -0.4
RP9-204ENST00000492391 IQSEC2Q5JU85 1478 aa12.56□□□□□ -0.4
RP9-204ENST00000492391 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
RP9-204ENST00000492391 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
RP9-204ENST00000492391 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
RP9-204ENST00000492391 PCGF6Q9BYE7 350 aa12.55□□□□□ -0.4
RP9-204ENST00000492391 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
RP9-204ENST00000492391 FBXO41Q8TF61 875 aa12.53□□□□□ -0.4
RP9-204ENST00000492391 PIK3R4Q99570 1358 aa12.53□□□□□ -0.4
RP9-204ENST00000492391 MYOM2P54296 1465 aa12.53□□□□□ -0.4
RP9-204ENST00000492391 BCANQ96GW7 911 aa12.52□□□□□ -0.41
RP9-204ENST00000492391 AMOTL2Q9Y2J4 779 aa12.52□□□□□ -0.41
RP9-204ENST00000492391 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
RP9-204ENST00000492391 NKTRP30414 1462 aaKnown RBP12.52□□□□□ -0.41
RP9-204ENST00000492391 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
RP9-204ENST00000492391 C14orf93Q9H972 538 aaKnown RBP12.51□□□□□ -0.41
RP9-204ENST00000492391 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.51□□□□□ -0.41
RP9-204ENST00000492391 CFAP70Q5T0N1 1121 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms