RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 PTPRMP28827 1452 aa15.32■□□□□ 0.04
ATF3-209ENST00000492118 ADGRF5Q8IZF2 1346 aa15.31■□□□□ 0.04
ATF3-209ENST00000492118 ADGRB3O60242 1522 aa15.29■□□□□ 0.04
ATF3-209ENST00000492118 BCANQ96GW7 911 aa15.29■□□□□ 0.04
ATF3-209ENST00000492118 BCL11AQ9H165 835 aa15.28■□□□□ 0.04
ATF3-209ENST00000492118 TMEM131LA2VDJ0 1609 aa15.28■□□□□ 0.04
ATF3-209ENST00000492118 NBPF1Q3BBV0 1214 aa15.28■□□□□ 0.04
ATF3-209ENST00000492118 A2ML1A8K2U0 1454 aa15.26■□□□□ 0.03
ATF3-209ENST00000492118 CFAP70Q5T0N1 1121 aa15.25■□□□□ 0.03
ATF3-209ENST00000492118 PRAG1Q86YV5 1406 aa15.24■□□□□ 0.03
ATF3-209ENST00000492118 MYO3AQ8NEV4 1616 aa15.24■□□□□ 0.03
ATF3-209ENST00000492118 RIMS2Q9UQ26 1411 aa15.23■□□□□ 0.03
ATF3-209ENST00000492118 VGFO15240 615 aaPredicted RBP15.23■□□□□ 0.03
ATF3-209ENST00000492118 TMEM132EQ6IEE7 984 aa15.23■□□□□ 0.03
ATF3-209ENST00000492118 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
ATF3-209ENST00000492118 ROCK2O75116 1388 aaKnown RBP15.23■□□□□ 0.03
ATF3-209ENST00000492118 UBR1Q8IWV7 1749 aa15.22■□□□□ 0.03
ATF3-209ENST00000492118 NLRP1Q9C000 1473 aa15.22■□□□□ 0.03
ATF3-209ENST00000492118 LTKP29376 864 aa15.22■□□□□ 0.03
ATF3-209ENST00000492118 TXNDC2Q86VQ3 553 aa15.22■□□□□ 0.03
ATF3-209ENST00000492118 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
ATF3-209ENST00000492118 PPLO60437 1756 aa15.22■□□□□ 0.03
ATF3-209ENST00000492118 HSPA2P54652 639 aa15.22■□□□□ 0.03
ATF3-209ENST00000492118 SETD1BQ9UPS6 1966 aaKnown RBP15.21■□□□□ 0.03
ATF3-209ENST00000492118 TULP1O00294 542 aaPredicted RBP15.21■□□□□ 0.03
ATF3-209ENST00000492118 THEMISQ8N1K5 641 aaPredicted RBP15.21■□□□□ 0.03
ATF3-209ENST00000492118 KLHL34Q8N239 644 aa15.21■□□□□ 0.03
ATF3-209ENST00000492118 RPGRIP1LQ68CZ1 1315 aa15.21■□□□□ 0.03
ATF3-209ENST00000492118 CEP170BQ9Y4F5 1589 aaPredicted RBP15.2■□□□□ 0.02
ATF3-209ENST00000492118 TMEM2Q9UHN6 1383 aa15.19■□□□□ 0.02
ATF3-209ENST00000492118 IFT172Q9UG01 1749 aa15.19■□□□□ 0.02
ATF3-209ENST00000492118 UHRF1BP1Q6BDS2 1440 aa15.19■□□□□ 0.02
ATF3-209ENST00000492118 KCNA4P22459 653 aa15.19■□□□□ 0.02
ATF3-209ENST00000492118 STK26Q9P289 416 aa15.19■□□□□ 0.02
ATF3-209ENST00000492118 SLC26A8Q96RN1 970 aa15.18■□□□□ 0.02
ATF3-209ENST00000492118 EID1Q9Y6B2 187 aa15.18■□□□□ 0.02
ATF3-209ENST00000492118 HSPA5P11021 654 aaKnown RBP15.17■□□□□ 0.02
ATF3-209ENST00000492118 TRPM1Q7Z4N2 1603 aa15.16■□□□□ 0.02
ATF3-209ENST00000492118 ZFYVE9O95405 1425 aa15.16■□□□□ 0.02
ATF3-209ENST00000492118 MYOM2P54296 1465 aa15.15■□□□□ 0.02
ATF3-209ENST00000492118 NEURL4Q96JN8 1562 aa15.15■□□□□ 0.02
ATF3-209ENST00000492118 EIF4G2P78344 907 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATF3-209ENST00000492118 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATF3-209ENST00000492118 PIK3C2GO75747 1445 aa15.15■□□□□ 0.02
ATF3-209ENST00000492118 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
ATF3-209ENST00000492118 NCKAP5LQ9HCH0 1330 aa15.14■□□□□ 0.01
ATF3-209ENST00000492118 HDGFP51858 240 aaKnown RBP15.14■□□□□ 0.01
ATF3-209ENST00000492118 TRAK1Q9UPV9 953 aa15.14■□□□□ 0.01
ATF3-209ENST00000492118 USP47Q96K76 1375 aa15.14■□□□□ 0.01
ATF3-209ENST00000492118 ZNF316A6NFI3 1004 aaPredicted RBP15.14■□□□□ 0.01
ATF3-209ENST00000492118 SAFB2Q14151 953 aaKnown RBP eCLIP15.14■□□□□ 0.01
ATF3-209ENST00000492118 POLR3GLQ9BT43 218 aa15.14■□□□□ 0.01
ATF3-209ENST00000492118 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
ATF3-209ENST00000492118 ST20-MTHFSA0A0A6YYL1 179 aa15.13■□□□□ 0.01
ATF3-209ENST00000492118 ANKLE2Q86XL3 938 aa15.13■□□□□ 0.01
ATF3-209ENST00000492118 STAC3Q96MF2 364 aa15.13■□□□□ 0.01
ATF3-209ENST00000492118 NRXN1Q9ULB1 1477 aa15.11■□□□□ 0.01
ATF3-209ENST00000492118 ZNF142P52746 1687 aaPredicted RBP15.09■□□□□ 0.01
ATF3-209ENST00000492118 SCAF11Q99590 1463 aaKnown RBP15.09■□□□□ 0.01
ATF3-209ENST00000492118 KDM5AP29375 1690 aaKnown RBP15.09■□□□□ 0.01
ATF3-209ENST00000492118 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
ATF3-209ENST00000492118 ALKQ9UM73 1620 aa15.08■□□□□ 0.01
ATF3-209ENST00000492118 METP08581 1390 aa15.08■□□□□ 0.01
ATF3-209ENST00000492118 SLIT1O75093 1534 aa15.08■□□□□ 0
ATF3-209ENST00000492118 TAOK2Q9UL54 1235 aa15.08■□□□□ 0
ATF3-209ENST00000492118 ARHGAP23Q9P227 1491 aa15.07■□□□□ 0
ATF3-209ENST00000492118 PLEKHG1Q9ULL1 1385 aa15.06■□□□□ 0
ATF3-209ENST00000492118 C11orf95C9JLR9 678 aaPredicted RBP15.06■□□□□ 0
ATF3-209ENST00000492118 LMTK3Q96Q04 1460 aa15.06■□□□□ 0
ATF3-209ENST00000492118 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
ATF3-209ENST00000492118 GPRASP1Q5JY77 1395 aa15.05■□□□□ -0
ATF3-209ENST00000492118 RBM33Q96EV2 1170 aaKnown RBP15.05■□□□□ -0
ATF3-209ENST00000492118 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
ATF3-209ENST00000492118 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
ATF3-209ENST00000492118 ADAMTS13Q76LX8 1427 aa15.04■□□□□ -0
ATF3-209ENST00000492118 ADGRB1O14514 1584 aa15.03■□□□□ -0
ATF3-209ENST00000492118 PRAM1Q96QH2 718 aa15.03■□□□□ -0
ATF3-209ENST00000492118 KIAA1210Q9ULL0 1709 aa15.03■□□□□ -0
ATF3-209ENST00000492118 PLEKHG5O94827 1062 aa15.02■□□□□ -0
ATF3-209ENST00000492118 POGKQ9P215 609 aa15.02■□□□□ -0
ATF3-209ENST00000492118 YTHDC2Q9H6S0 1430 aaKnown RBP15.02■□□□□ -0
ATF3-209ENST00000492118 PODXL2Q9NZ53 605 aa15.01□□□□□ -0.01
ATF3-209ENST00000492118 SETBP1Q9Y6X0 1596 aa15.01□□□□□ -0.01
ATF3-209ENST00000492118 DDX10Q13206 875 aaKnown RBP15.01□□□□□ -0.01
ATF3-209ENST00000492118 AEBP2Q6ZN18 517 aaPredicted RBP15.01□□□□□ -0.01
ATF3-209ENST00000492118 AMOTL2Q9Y2J4 779 aa15.01□□□□□ -0.01
ATF3-209ENST00000492118 MINK1Q8N4C8 1332 aaPredicted RBP15.01□□□□□ -0.01
ATF3-209ENST00000492118 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
ATF3-209ENST00000492118 LAMC1P11047 1609 aa15□□□□□ -0.01
ATF3-209ENST00000492118 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
ATF3-209ENST00000492118 SETD1AO15047 1707 aaKnown RBP14.99□□□□□ -0.01
ATF3-209ENST00000492118 EIF3AQ14152 1382 aaKnown RBP14.99□□□□□ -0.01
ATF3-209ENST00000492118 PLEKHH1Q9ULM0 1364 aa14.99□□□□□ -0.01
ATF3-209ENST00000492118 WASHC2AQ641Q2 1341 aa14.99□□□□□ -0.01
ATF3-209ENST00000492118 TESK2Q96S53 571 aa14.99□□□□□ -0.01
ATF3-209ENST00000492118 POLR1AO95602 1720 aaPredicted RBP14.99□□□□□ -0.01
ATF3-209ENST00000492118 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
ATF3-209ENST00000492118 TBX22Q9Y458 520 aa14.98□□□□□ -0.01
ATF3-209ENST00000492118 PTPRUQ92729 1446 aa14.98□□□□□ -0.01
ATF3-209ENST00000492118 KCNA6P17658 529 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms