RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 ANP32BQ92688 251 aaKnown RBP13.98□□□□□ -0.17
SNED1-211ENST00000491761 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
SNED1-211ENST00000491761 CHD1O14646 1710 aa13.98□□□□□ -0.17
SNED1-211ENST00000491761 UNC13BO14795 1591 aa13.97□□□□□ -0.17
SNED1-211ENST00000491761 PLXNC1O60486 1568 aa13.96□□□□□ -0.17
SNED1-211ENST00000491761 CRBNQ96SW2 442 aa13.96□□□□□ -0.17
SNED1-211ENST00000491761 SCAPERQ9BY12 1400 aa13.95□□□□□ -0.18
SNED1-211ENST00000491761 TRPM1Q7Z4N2 1603 aa13.95□□□□□ -0.18
SNED1-211ENST00000491761 RTEL1-TNFRSF6BF6WH68 1400 aa13.95□□□□□ -0.18
SNED1-211ENST00000491761 IQGAP3Q86VI3 1631 aa13.94□□□□□ -0.18
SNED1-211ENST00000491761 SCAF11Q99590 1463 aaKnown RBP13.94□□□□□ -0.18
SNED1-211ENST00000491761 GLIPR1L2Q4G1C9 344 aa13.94□□□□□ -0.18
SNED1-211ENST00000491761 CFAP70Q5T0N1 1121 aa13.94□□□□□ -0.18
SNED1-211ENST00000491761 ATP10AO60312 1499 aa13.94□□□□□ -0.18
SNED1-211ENST00000491761 MS4A1P11836 297 aa13.94□□□□□ -0.18
SNED1-211ENST00000491761 GGT6Q6P531 493 aa13.93□□□□□ -0.18
SNED1-211ENST00000491761 PDE4AP27815 886 aa13.93□□□□□ -0.18
SNED1-211ENST00000491761 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
SNED1-211ENST00000491761 CCDC146Q8IYE0 955 aa13.93□□□□□ -0.18
SNED1-211ENST00000491761 ERCC6L2Q5T890 1561 aa13.93□□□□□ -0.18
SNED1-211ENST00000491761 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
SNED1-211ENST00000491761 NEUROD2Q15784 382 aa13.93□□□□□ -0.18
SNED1-211ENST00000491761 AEBP2Q6ZN18 517 aaPredicted RBP13.92□□□□□ -0.18
SNED1-211ENST00000491761 TPRNQ4KMQ1 711 aa13.92□□□□□ -0.18
SNED1-211ENST00000491761 INSRP06213 1382 aa13.92□□□□□ -0.18
SNED1-211ENST00000491761 UHRF1BP1LA0JNW5 1464 aa13.92□□□□□ -0.18
SNED1-211ENST00000491761 HAP1P54257 671 aaPredicted RBP13.92□□□□□ -0.18
SNED1-211ENST00000491761 FANCAO15360 1455 aa13.91□□□□□ -0.18
SNED1-211ENST00000491761 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
SNED1-211ENST00000491761 PRKCSHP14314 528 aaPredicted RBP13.9□□□□□ -0.18
SNED1-211ENST00000491761 ABCC1P33527 1531 aa13.9□□□□□ -0.18
SNED1-211ENST00000491761 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
SNED1-211ENST00000491761 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
SNED1-211ENST00000491761 ADGRL1O94910 1474 aa13.89□□□□□ -0.19
SNED1-211ENST00000491761 APAF1O14727 1248 aa13.89□□□□□ -0.19
SNED1-211ENST00000491761 SHROOM2Q13796 1616 aa13.89□□□□□ -0.19
SNED1-211ENST00000491761 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
SNED1-211ENST00000491761 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
SNED1-211ENST00000491761 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
SNED1-211ENST00000491761 BLMP54132 1417 aaPredicted RBP13.88□□□□□ -0.19
SNED1-211ENST00000491761 WDR7Q9Y4E6 1490 aa13.88□□□□□ -0.19
SNED1-211ENST00000491761 ZCCHC11Q5TAX3 1644 aaKnown RBP13.88□□□□□ -0.19
SNED1-211ENST00000491761 CENPJQ9HC77 1338 aaPredicted RBP13.88□□□□□ -0.19
SNED1-211ENST00000491761 PAK3O75914 559 aaPredicted RBP13.87□□□□□ -0.19
SNED1-211ENST00000491761 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
SNED1-211ENST00000491761 CENPQQ7L2Z9 268 aaPredicted RBP13.87□□□□□ -0.19
SNED1-211ENST00000491761 LAMC1P11047 1609 aa13.86□□□□□ -0.19
SNED1-211ENST00000491761 MAGI2Q86UL8 1455 aa13.86□□□□□ -0.19
SNED1-211ENST00000491761 E9PSI1 815 aa13.86□□□□□ -0.19
SNED1-211ENST00000491761 ADGRF5Q8IZF2 1346 aa13.86□□□□□ -0.19
SNED1-211ENST00000491761 SPRYD3Q8NCJ5 442 aa13.85□□□□□ -0.19
SNED1-211ENST00000491761 NAP1L5Q96NT1 182 aaPredicted RBP13.85□□□□□ -0.19
SNED1-211ENST00000491761 ASXL1Q8IXJ9 1541 aa13.85□□□□□ -0.19
SNED1-211ENST00000491761 BACH2Q9BYV9 841 aa13.84□□□□□ -0.19
SNED1-211ENST00000491761 TRPM2O94759 1503 aa13.84□□□□□ -0.19
SNED1-211ENST00000491761 E9PCH4 1651 aa13.84□□□□□ -0.19
SNED1-211ENST00000491761 PTPRTO14522 1441 aa13.84□□□□□ -0.19
SNED1-211ENST00000491761 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.19
SNED1-211ENST00000491761 ATP7AQ04656 1500 aa13.83□□□□□ -0.19
SNED1-211ENST00000491761 NCLP19338 710 aaKnown RBP13.83□□□□□ -0.2
SNED1-211ENST00000491761 ZMYM4Q5VZL5 1548 aa13.83□□□□□ -0.2
SNED1-211ENST00000491761 PPM1GO15355 546 aaPredicted RBP13.83□□□□□ -0.2
SNED1-211ENST00000491761 SLFN5Q08AF3 891 aa13.83□□□□□ -0.2
SNED1-211ENST00000491761 TRIM44Q96DX7 344 aaPredicted RBP13.82□□□□□ -0.2
SNED1-211ENST00000491761 FRAT1Q92837 279 aaPredicted RBP13.82□□□□□ -0.2
SNED1-211ENST00000491761 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
SNED1-211ENST00000491761 C20orf194Q5TEA3 1177 aa13.81□□□□□ -0.2
SNED1-211ENST00000491761 NPC1L1Q9UHC9 1359 aa13.81□□□□□ -0.2
SNED1-211ENST00000491761 ZFYVE16Q7Z3T8 1539 aa13.81□□□□□ -0.2
SNED1-211ENST00000491761 ARAP3Q8WWN8 1544 aa13.81□□□□□ -0.2
SNED1-211ENST00000491761 PLEKHH1Q9ULM0 1364 aa13.8□□□□□ -0.2
SNED1-211ENST00000491761 ASXL2Q76L83 1435 aa13.8□□□□□ -0.2
SNED1-211ENST00000491761 VGFO15240 615 aaPredicted RBP13.79□□□□□ -0.2
SNED1-211ENST00000491761 TMEM132EQ6IEE7 984 aa13.79□□□□□ -0.2
SNED1-211ENST00000491761 CGNL1Q0VF96 1302 aa13.79□□□□□ -0.2
SNED1-211ENST00000491761 NUTM2DQ5VT03 806 aaPredicted RBP13.79□□□□□ -0.2
SNED1-211ENST00000491761 EVC2Q86UK5 1308 aa13.78□□□□□ -0.2
SNED1-211ENST00000491761 BECN1Q14457 450 aa13.78□□□□□ -0.2
SNED1-211ENST00000491761 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
SNED1-211ENST00000491761 RPGRIP1LQ68CZ1 1315 aa13.77□□□□□ -0.2
SNED1-211ENST00000491761 SAFB2Q14151 953 aaKnown RBP eCLIP13.77□□□□□ -0.2
SNED1-211ENST00000491761 MADDQ8WXG6 1647 aa13.77□□□□□ -0.2
SNED1-211ENST00000491761 NOS1P29475 1434 aa13.77□□□□□ -0.2
SNED1-211ENST00000491761 CLASP1Q7Z460 1538 aa13.77□□□□□ -0.2
SNED1-211ENST00000491761 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
SNED1-211ENST00000491761 SYNMO15061 1565 aa13.76□□□□□ -0.21
SNED1-211ENST00000491761 RUNDC1Q96C34 613 aa13.76□□□□□ -0.21
SNED1-211ENST00000491761 RRP7AQ9Y3A4 280 aaKnown RBP13.76□□□□□ -0.21
SNED1-211ENST00000491761 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
SNED1-211ENST00000491761 TET3O43151 1660 aa13.76□□□□□ -0.21
SNED1-211ENST00000491761 STK26Q9P289 416 aa13.76□□□□□ -0.21
SNED1-211ENST00000491761 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
SNED1-211ENST00000491761 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNED1-211ENST00000491761 POGKQ9P215 609 aa13.75□□□□□ -0.21
SNED1-211ENST00000491761 CLTCL1P53675 1640 aa13.75□□□□□ -0.21
SNED1-211ENST00000491761 CD109Q6YHK3 1445 aa13.75□□□□□ -0.21
SNED1-211ENST00000491761 ZNF518AQ6AHZ1 1483 aa13.75□□□□□ -0.21
SNED1-211ENST00000491761 FAM69CQ0P6D2 419 aa13.75□□□□□ -0.21
SNED1-211ENST00000491761 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
SNED1-211ENST00000491761 C14orf93Q9H972 538 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms