RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 NUTM2DQ5VT03 806 aaPredicted RBP12.64□□□□□ -0.39
APP-216ENST00000491395 TMEM94Q12767 1356 aa12.64□□□□□ -0.39
APP-216ENST00000491395 RIMS2Q9UQ26 1411 aa12.63□□□□□ -0.39
APP-216ENST00000491395 TET3O43151 1660 aa12.63□□□□□ -0.39
APP-216ENST00000491395 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
APP-216ENST00000491395 UNC13BO14795 1591 aa12.61□□□□□ -0.39
APP-216ENST00000491395 PLEKHG1Q9ULL1 1385 aa12.61□□□□□ -0.39
APP-216ENST00000491395 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.61□□□□□ -0.39
APP-216ENST00000491395 KDM5AP29375 1690 aaKnown RBP12.61□□□□□ -0.39
APP-216ENST00000491395 TBX22Q9Y458 520 aa12.6□□□□□ -0.39
APP-216ENST00000491395 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
APP-216ENST00000491395 RRBP1Q9P2E9 1410 aaKnown RBP12.57□□□□□ -0.4
APP-216ENST00000491395 TMEM131LA2VDJ0 1609 aa12.56□□□□□ -0.4
APP-216ENST00000491395 IQGAP3Q86VI3 1631 aa12.56□□□□□ -0.4
APP-216ENST00000491395 PHF23Q9BUL5 403 aaPredicted RBP12.56□□□□□ -0.4
APP-216ENST00000491395 E9PCH4 1651 aa12.56□□□□□ -0.4
APP-216ENST00000491395 MED1Q15648 1581 aaPredicted RBP12.56□□□□□ -0.4
APP-216ENST00000491395 ADAMTS13Q76LX8 1427 aa12.55□□□□□ -0.4
APP-216ENST00000491395 GCC2Q8IWJ2 1684 aa12.55□□□□□ -0.4
APP-216ENST00000491395 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
APP-216ENST00000491395 NAIPQ13075 1403 aa12.54□□□□□ -0.4
APP-216ENST00000491395 NKTRP30414 1462 aaKnown RBP12.54□□□□□ -0.4
APP-216ENST00000491395 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
APP-216ENST00000491395 MSH6P52701 1360 aa12.54□□□□□ -0.4
APP-216ENST00000491395 XIRP1Q702N8 1843 aaKnown RBP12.53□□□□□ -0.4
APP-216ENST00000491395 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
APP-216ENST00000491395 TRIM52Q96A61 297 aa12.53□□□□□ -0.4
APP-216ENST00000491395 AMOTL2Q9Y2J4 779 aa12.53□□□□□ -0.4
APP-216ENST00000491395 NWD1Q149M9 1564 aa12.52□□□□□ -0.4
APP-216ENST00000491395 MYO5BQ9ULV0 1848 aa12.51□□□□□ -0.41
APP-216ENST00000491395 RGS17Q9UGC6 210 aaPredicted RBP12.5□□□□□ -0.41
APP-216ENST00000491395 PIK3R4Q99570 1358 aa12.5□□□□□ -0.41
APP-216ENST00000491395 PTPRUQ92729 1446 aa12.5□□□□□ -0.41
APP-216ENST00000491395 C19orf44Q9H6X5 657 aa12.49□□□□□ -0.41
APP-216ENST00000491395 NCOA3Q9Y6Q9 1424 aa12.48□□□□□ -0.41
APP-216ENST00000491395 ATF3P18847 181 aa12.48□□□□□ -0.41
APP-216ENST00000491395 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
APP-216ENST00000491395 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
APP-216ENST00000491395 CADPS2Q86UW7 1296 aa12.47□□□□□ -0.41
APP-216ENST00000491395 METP08581 1390 aa12.46□□□□□ -0.41
APP-216ENST00000491395 CHD2O14647 1828 aaKnown RBP12.46□□□□□ -0.42
APP-216ENST00000491395 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
APP-216ENST00000491395 FOXD1Q16676 465 aa12.45□□□□□ -0.42
APP-216ENST00000491395 DIP2AQ14689 1571 aa12.44□□□□□ -0.42
APP-216ENST00000491395 TRPM2O94759 1503 aa12.44□□□□□ -0.42
APP-216ENST00000491395 POTEAQ6S8J7 498 aa12.43□□□□□ -0.42
APP-216ENST00000491395 CLTCL1P53675 1640 aa12.43□□□□□ -0.42
APP-216ENST00000491395 JCADQ9P266 1359 aa12.43□□□□□ -0.42
APP-216ENST00000491395 SPHKAPQ2M3C7 1700 aa12.42□□□□□ -0.42
APP-216ENST00000491395 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
APP-216ENST00000491395 BRINP3Q76B58 766 aa12.42□□□□□ -0.42
APP-216ENST00000491395 SETBP1Q9Y6X0 1596 aa12.42□□□□□ -0.42
APP-216ENST00000491395 NEXMIFQ5QGS0 1516 aa12.41□□□□□ -0.42
APP-216ENST00000491395 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
APP-216ENST00000491395 RPGRIP1LQ68CZ1 1315 aa12.4□□□□□ -0.42
APP-216ENST00000491395 MPHOSPH9Q99550 1183 aa12.4□□□□□ -0.42
APP-216ENST00000491395 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.38□□□□□ -0.43
APP-216ENST00000491395 RGL3Q3MIN7 710 aa12.38□□□□□ -0.43
APP-216ENST00000491395 DDX17Q92841 729 aaKnown RBP12.37□□□□□ -0.43
APP-216ENST00000491395 DCCP43146 1447 aa12.37□□□□□ -0.43
APP-216ENST00000491395 MST1RQ04912 1400 aa12.37□□□□□ -0.43
APP-216ENST00000491395 ROBO2Q9HCK4 1378 aa12.36□□□□□ -0.43
APP-216ENST00000491395 PHLPP1O60346 1717 aa12.36□□□□□ -0.43
APP-216ENST00000491395 XRN1Q8IZH2 1706 aaKnown RBP12.36□□□□□ -0.43
APP-216ENST00000491395 ADGRL3Q9HAR2 1447 aa12.36□□□□□ -0.43
APP-216ENST00000491395 SPATA31A6Q5VVP1 1343 aa12.36□□□□□ -0.43
APP-216ENST00000491395 MEX3CQ5U5Q3 659 aaKnown RBP12.35□□□□□ -0.43
APP-216ENST00000491395 COL16A1Q07092 1604 aaPredicted RBP12.35□□□□□ -0.43
APP-216ENST00000491395 ADGRF5Q8IZF2 1346 aa12.35□□□□□ -0.43
APP-216ENST00000491395 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
APP-216ENST00000491395 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
APP-216ENST00000491395 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
APP-216ENST00000491395 CCDC144AA2RUR9 1427 aa12.34□□□□□ -0.43
APP-216ENST00000491395 LRP6O75581 1613 aa12.33□□□□□ -0.43
APP-216ENST00000491395 AHDC1Q5TGY3 1603 aaPredicted RBP12.33□□□□□ -0.43
APP-216ENST00000491395 ASXL1Q8IXJ9 1541 aa12.32□□□□□ -0.44
APP-216ENST00000491395 SPATA31E1Q6ZUB1 1445 aa12.32□□□□□ -0.44
APP-216ENST00000491395 LRRC59Q96AG4 307 aaKnown RBP12.32□□□□□ -0.44
APP-216ENST00000491395 ORAI2Q96SN7 254 aa12.32□□□□□ -0.44
APP-216ENST00000491395 STK26Q9P289 416 aa12.32□□□□□ -0.44
APP-216ENST00000491395 KIF1BO60333 1816 aa12.32□□□□□ -0.44
APP-216ENST00000491395 PTCH1Q13635 1447 aa12.31□□□□□ -0.44
APP-216ENST00000491395 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
APP-216ENST00000491395 C1orf167Q5SNV9 1468 aa12.31□□□□□ -0.44
APP-216ENST00000491395 ZNF772Q68DY9 489 aaPredicted RBP12.3□□□□□ -0.44
APP-216ENST00000491395 TMEM132EQ6IEE7 984 aa12.3□□□□□ -0.44
APP-216ENST00000491395 WAPLQ7Z5K2 1190 aa12.3□□□□□ -0.44
APP-216ENST00000491395 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
APP-216ENST00000491395 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
APP-216ENST00000491395 PNPLA6Q8IY17 1366 aa12.28□□□□□ -0.44
APP-216ENST00000491395 PRAG1Q86YV5 1406 aa12.28□□□□□ -0.44
APP-216ENST00000491395 LRPPRCP42704 1394 aaKnown RBP12.27□□□□□ -0.45
APP-216ENST00000491395 RAB3GAP2Q9H2M9 1393 aa12.27□□□□□ -0.45
APP-216ENST00000491395 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
APP-216ENST00000491395 ESCO1Q5FWF5 840 aa12.26□□□□□ -0.45
APP-216ENST00000491395 C8orf37Q96NL8 207 aa12.26□□□□□ -0.45
APP-216ENST00000491395 AFF2P51816 1311 aa12.26□□□□□ -0.45
APP-216ENST00000491395 SOS2Q07890 1332 aaPredicted RBP12.26□□□□□ -0.45
APP-216ENST00000491395 ABCC11Q96J66 1382 aa12.26□□□□□ -0.45
APP-216ENST00000491395 PLEKHH1Q9ULM0 1364 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms